Gene annotation
Transcriptome id Sobic.010G131400.1
Synonym SCN1
Functional annotation rho GDP-dissociation inhibitor 1, putative, expressed
UniProt A0A194YJW8
Pfam PF02115
Panther DB PTHR10980 PTHR10980:SF18
NCBI CDD KOG3205; Rho GDP-dissociation inhibitor
KEGG Orthology K12462; ARHGDI, Rho GDP-dissociation inhibitor
Gene Ontology GO:0005737; cytoplasm GO:0005094Rho GDP-dissociation inhibitor activity


Orthologs (automatic annotation)
TAIR AT3G07880 : Immunoglobulin E-set superfamily protein
RAP-DB (Rice) LOC_Os06g21340.1 : rho GDP-dissociation inhibitor 1, putative, expressed
MaizeGDB (Corn) Zm00025a032585 , Zm00025a021829
Brachypodium KQK01050
Barley HORVU6Hr1G070790.19 , HORVU6Hr1G070790.18 , HORVU6Hr1G070790.17 , HORVU6Hr1G070790.16 , HORVU6Hr1G070790.15 , HORVU6Hr1G070790.14
Wheat TraesCS6B02G310800 , TraesCS6D02G262900 , TraesCS6A02G282400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G180100 transferase family protein, putative, expressed -
2 Sobic.002G254900 membrane protein, putative, expressed -
3 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
4 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
5 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
6 Sobic.006G180300 ethylene-responsive protein related, putative, expressed -
7 Sobic.002G271300 NC domain-containing protein, putative, expressed -
8 Sobic.008G141200 DUF1336 domain containing protein, expressed -
9 Sobic.001G406700 expressed protein -
10 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -
11 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
12 Sobic.002G158900 AMP-binding domain containing protein, expressed -
13 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
14 Sobic.004G193500 expressed protein -
15 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
16 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
17 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
18 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
19 Sobic.005G231300 thaumatin, putative, expressed -
20 Sobic.008G099100 expressed protein -


Gene co-expression network
sample Sobic010G131400 Sobic010G131400 Sobic010G180100 Sobic010G180100 Sobic010G131400--Sobic010G180100 Sobic002G254900 Sobic002G254900 Sobic010G131400--Sobic002G254900 Sobic001G360700 Sobic001G360700 Sobic010G131400--Sobic001G360700 Sobic001G002800 Sobic001G002800 Sobic010G131400--Sobic001G002800 Sobic002G167600 Sobic002G167600 Sobic010G131400--Sobic002G167600 Sobic006G180300 Sobic006G180300 Sobic010G131400--Sobic006G180300 Sobic002G271300 Sobic002G271300 Sobic010G131400--Sobic002G271300 Sobic008G141200 Sobic008G141200 Sobic010G131400--Sobic008G141200 Sobic001G406700 Sobic001G406700 Sobic010G131400--Sobic001G406700 Sobic010G180100--Sobic010G131400 Sobic010G180100--Sobic002G254900 Sobic010G180100--Sobic002G167600 Sobic010G180100--Sobic001G360700 Sobic010G180100--Sobic001G002800 Sobic001G224300 Sobic001G224300 Sobic010G180100--Sobic001G224300 Sobic001G409100 Sobic001G409100 Sobic010G180100--Sobic001G409100 Sobic004G047600 Sobic004G047600 Sobic010G180100--Sobic004G047600 Sobic003G387500 Sobic003G387500 Sobic010G180100--Sobic003G387500 Sobic002G254900--Sobic001G002800 Sobic010G096700 Sobic010G096700 Sobic002G254900--Sobic010G096700 Sobic002G254900--Sobic010G180100 Sobic002G254900--Sobic004G047600 Sobic002G254900--Sobic001G360700 Sobic001G503000 Sobic001G503000 Sobic002G254900--Sobic001G503000 Sobic001G506600 Sobic001G506600 Sobic002G254900--Sobic001G506600 Sobic007G090472 Sobic007G090472 Sobic002G254900--Sobic007G090472 Sobic002G254900--Sobic002G167600 Sobic001G360700--Sobic004G047600 Sobic007G047300 Sobic007G047300 Sobic001G360700--Sobic007G047300 Sobic001G360700--Sobic002G167600 Sobic002G203900 Sobic002G203900 Sobic001G360700--Sobic002G203900 Sobic001G471800 Sobic001G471800 Sobic001G360700--Sobic001G471800 Sobic001G360700--Sobic002G254900 Sobic002G146000 Sobic002G146000 Sobic001G360700--Sobic002G146000 Sobic004G193500 Sobic004G193500 Sobic001G360700--Sobic004G193500 Sobic001G072600 Sobic001G072600 Sobic001G360700--Sobic001G072600 Sobic001G002800--Sobic002G254900 Sobic001G002800--Sobic001G503000 Sobic001G002800--Sobic007G090472 Sobic003G287200 Sobic003G287200 Sobic001G002800--Sobic003G287200 Sobic005G107500 Sobic005G107500 Sobic001G002800--Sobic005G107500 Sobic006G209000 Sobic006G209000 Sobic001G002800--Sobic006G209000 Sobic001G002800--Sobic010G096700 Sobic007G073000 Sobic007G073000 Sobic001G002800--Sobic007G073000 Sobic001G002800--Sobic001G506600 Sobic002G167600--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic002G167600--Sobic006G144600 Sobic002G167600--Sobic004G047600 Sobic002G167600--Sobic001G406700 Sobic002G167600--Sobic002G203900 Sobic009G170500 Sobic009G170500 Sobic002G167600--Sobic009G170500 Sobic002G167600--Sobic002G254900 Sobic002G167600--Sobic001G072600 Sobic002G167600--Sobic010G180100 Sobic005G065700 Sobic005G065700 Sobic006G180300--Sobic005G065700 Sobic005G182900 Sobic005G182900 Sobic006G180300--Sobic005G182900 Sobic002G019000 Sobic002G019000 Sobic006G180300--Sobic002G019000 Sobic002G391900 Sobic002G391900 Sobic006G180300--Sobic002G391900 Sobic001G506700 Sobic001G506700 Sobic006G180300--Sobic001G506700 Sobic006G180300--Sobic006G209000 Sobic001G274400 Sobic001G274400 Sobic006G180300--Sobic001G274400 Sobic006G031100 Sobic006G031100 Sobic006G180300--Sobic006G031100 Sobic005G071900 Sobic005G071900 Sobic006G180300--Sobic005G071900 Sobic009G059500 Sobic009G059500 Sobic002G271300--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic002G271300--Sobic002G186900 Sobic005G022500 Sobic005G022500 Sobic002G271300--Sobic005G022500 Sobic002G271300--Sobic010G131400 Sobic008G168100 Sobic008G168100 Sobic002G271300--Sobic008G168100 Sobic002G271300--Sobic002G254900 Sobic003G087700 Sobic003G087700 Sobic002G271300--Sobic003G087700 Sobic008G062900 Sobic008G062900 Sobic002G271300--Sobic008G062900 Sobic010G114000 Sobic010G114000 Sobic002G271300--Sobic010G114000 Sobic003G135400 Sobic003G135400 Sobic008G141200--Sobic003G135400 Sobic009G206500 Sobic009G206500 Sobic008G141200--Sobic009G206500 Sobic003G420100 Sobic003G420100 Sobic008G141200--Sobic003G420100 Sobic008G141200--Sobic009G059500 Sobic003G247600 Sobic003G247600 Sobic008G141200--Sobic003G247600 Sobic008G141200--Sobic010G131400 Sobic009G189200 Sobic009G189200 Sobic008G141200--Sobic009G189200 Sobic009G214100 Sobic009G214100 Sobic008G141200--Sobic009G214100 Sobic004G066900 Sobic004G066900 Sobic008G141200--Sobic004G066900 Sobic001G406700--Sobic003G387500 Sobic001G406700--Sobic006G144600 Sobic001G399200 Sobic001G399200 Sobic001G406700--Sobic001G399200 Sobic001G406700--Sobic009G170500 Sobic010G232500 Sobic010G232500 Sobic001G406700--Sobic010G232500 Sobic001G406700--Sobic002G167600 Sobic005G229100 Sobic005G229100 Sobic001G406700--Sobic005G229100 Sobic007G119500 Sobic007G119500 Sobic001G406700--Sobic007G119500 Sobic009G246700 Sobic009G246700 Sobic001G406700--Sobic009G246700
Octagon: transcription factors


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