Gene annotation
Transcriptome id Sobic.002G271300.1
Synonym Sb02g030510
Functional annotation NC domain-containing protein, putative, expressed
UniProt C5X643
Pfam PF04970
Panther DB PTHR13943 PTHR13943:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01225 : NC domain-containing protein-related
RAP-DB (Rice) LOC_Os09g35810.1 : NC domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a014400 , Zm00025a047733
Brachypodium KQJ91136
Barley HORVU5Hr1G080870.4 , HORVU5Hr1G080870.2 , HORVU5Hr1G080870.3
Wheat TraesCS5A02G314900 , TraesCS5D02G321200 , TraesCS5B02G315900
Populus -


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cDNA sequences
Sobic.002G271300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G059500 solute carrier family 35 member E3, putative, expressed K15285: solute carrier family 35, member E3
2 Sobic.002G186900 enolase, putative, expressed K01689: ENO, enolase
3 Sobic.005G022500 alpha-N-arabinofuranosidase A, putative, expressed K01209: alpha-L-arabinofuranosidase
4 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
5 Sobic.008G168100 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
6 Sobic.002G254900 membrane protein, putative, expressed -
7 Sobic.003G087700 glycosyltransferase protein, putative, expressed -
8 Sobic.008G062900 H-BTB8 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed -
9 Sobic.010G114000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
10 Sobic.005G041300 amino acid permease family protein, putative, expressed -
11 Sobic.009G250100 extra-large G-protein-related, putative, expressed -
12 Sobic.003G294100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dihydropyrimidinase, putative, expressed K01465: URA4, dihydroorotase
13 Sobic.001G506600 exostosin family domain containing protein, expressed -
14 Sobic.002G101300 erythronate-4-phosphate dehydrogenase domain containing protein, expressed -
15 Sobic.003G444200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@haloacid dehalogenase-like hydrolase family protein, putative, expressed -
16 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
17 Sobic.003G082800 transferase family protein, putative, expressed K13065: E2.3.1.133, shikimate O-hydroxycinnamoyltransferase
18 Sobic.010G042600 transporter family protein, putative, expressed K15280: solute carrier family 35, member C2
19 Sobic.002G111500 Fatty acyl-ACP thioesterases B FATB (At)(PubMedID : 27208977)@myristoyl-acyl carrier protein thioesterase, chloroplast precursor, putative, expressed K10781: fatty acyl-ACP thioesterase B
20 Sobic.010G180100 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G271300 Sobic002G271300 Sobic009G059500 Sobic009G059500 Sobic002G271300--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic002G271300--Sobic002G186900 Sobic005G022500 Sobic005G022500 Sobic002G271300--Sobic005G022500 Sobic010G131400 Sobic010G131400 Sobic002G271300--Sobic010G131400 Sobic008G168100 Sobic008G168100 Sobic002G271300--Sobic008G168100 Sobic002G254900 Sobic002G254900 Sobic002G271300--Sobic002G254900 Sobic003G087700 Sobic003G087700 Sobic002G271300--Sobic003G087700 Sobic008G062900 Sobic008G062900 Sobic002G271300--Sobic008G062900 Sobic010G114000 Sobic010G114000 Sobic002G271300--Sobic010G114000 Sobic009G059500--Sobic008G168100 Sobic009G059500--Sobic002G271300 Sobic009G059500--Sobic002G186900 Sobic008G126600 Sobic008G126600 Sobic009G059500--Sobic008G126600 Sobic003G294100 Sobic003G294100 Sobic009G059500--Sobic003G294100 Sobic008G141200 Sobic008G141200 Sobic009G059500--Sobic008G141200 Sobic001G228200 Sobic001G228200 Sobic009G059500--Sobic001G228200 Sobic004G054000 Sobic004G054000 Sobic009G059500--Sobic004G054000 Sobic007G044400 Sobic007G044400 Sobic009G059500--Sobic007G044400 Sobic002G186900--Sobic009G059500 Sobic002G186900--Sobic002G271300 Sobic003G096000 Sobic003G096000 Sobic002G186900--Sobic003G096000 Sobic010G089500 Sobic010G089500 Sobic002G186900--Sobic010G089500 Sobic010G101600 Sobic010G101600 Sobic002G186900--Sobic010G101600 Sobic004G056400 Sobic004G056400 Sobic002G186900--Sobic004G056400 Sobic002G186900--Sobic001G228200 Sobic006G200000 Sobic006G200000 Sobic002G186900--Sobic006G200000 Sobic002G186900--Sobic007G044400 Sobic001G506600 Sobic001G506600 Sobic005G022500--Sobic001G506600 Sobic005G219700 Sobic005G219700 Sobic005G022500--Sobic005G219700 Sobic001G002800 Sobic001G002800 Sobic005G022500--Sobic001G002800 Sobic001G503000 Sobic001G503000 Sobic005G022500--Sobic001G503000 Sobic007G020700 Sobic007G020700 Sobic005G022500--Sobic007G020700 Sobic001G163800 Sobic001G163800 Sobic005G022500--Sobic001G163800 Sobic008G133000 Sobic008G133000 Sobic005G022500--Sobic008G133000 Sobic007G172500 Sobic007G172500 Sobic005G022500--Sobic007G172500 Sobic002G376100 Sobic002G376100 Sobic005G022500--Sobic002G376100 Sobic010G180100 Sobic010G180100 Sobic010G131400--Sobic010G180100 Sobic010G131400--Sobic002G254900 Sobic001G360700 Sobic001G360700 Sobic010G131400--Sobic001G360700 Sobic010G131400--Sobic001G002800 Sobic002G167600 Sobic002G167600 Sobic010G131400--Sobic002G167600 Sobic006G180300 Sobic006G180300 Sobic010G131400--Sobic006G180300 Sobic010G131400--Sobic002G271300 Sobic010G131400--Sobic008G141200 Sobic001G406700 Sobic001G406700 Sobic010G131400--Sobic001G406700 Sobic008G168100--Sobic009G059500 Sobic008G168100--Sobic001G228200 Sobic008G168100--Sobic004G054000 Sobic008G168100--Sobic003G294100 Sobic008G168100--Sobic002G271300 Sobic009G250100 Sobic009G250100 Sobic008G168100--Sobic009G250100 Sobic008G168100--Sobic008G126600 Sobic002G094600 Sobic002G094600 Sobic008G168100--Sobic002G094600 Sobic007G152900 Sobic007G152900 Sobic008G168100--Sobic007G152900 Sobic002G254900--Sobic001G002800 Sobic010G096700 Sobic010G096700 Sobic002G254900--Sobic010G096700 Sobic002G254900--Sobic010G180100 Sobic004G047600 Sobic004G047600 Sobic002G254900--Sobic004G047600 Sobic002G254900--Sobic001G360700 Sobic002G254900--Sobic001G503000 Sobic002G254900--Sobic001G506600 Sobic007G090472 Sobic007G090472 Sobic002G254900--Sobic007G090472 Sobic002G254900--Sobic002G167600 Sobic001G102100 Sobic001G102100 Sobic003G087700--Sobic001G102100 Sobic003G087700--Sobic001G506600 Sobic003G087700--Sobic002G271300 Sobic005G041300 Sobic005G041300 Sobic003G087700--Sobic005G041300 Sobic006G183900 Sobic006G183900 Sobic003G087700--Sobic006G183900 Sobic008G035800 Sobic008G035800 Sobic003G087700--Sobic008G035800 Sobic008G035700 Sobic008G035700 Sobic003G087700--Sobic008G035700 Sobic003G140200 Sobic003G140200 Sobic003G087700--Sobic003G140200 Sobic004G251600 Sobic004G251600 Sobic003G087700--Sobic004G251600 Sobic008G062900--Sobic005G022500 Sobic001G348800 Sobic001G348800 Sobic008G062900--Sobic001G348800 Sobic008G062900--Sobic001G002800 Sobic008G062900--Sobic006G183900 Sobic008G062900--Sobic001G503000 Sobic006G028400 Sobic006G028400 Sobic008G062900--Sobic006G028400 Sobic005G115300 Sobic005G115300 Sobic008G062900--Sobic005G115300 Sobic008G062900--Sobic007G090472 Sobic003G287200 Sobic003G287200 Sobic008G062900--Sobic003G287200 Sobic010G096100 Sobic010G096100 Sobic010G114000--Sobic010G096100 Sobic006G075000 Sobic006G075000 Sobic010G114000--Sobic006G075000 Sobic010G114000--Sobic002G271300 Sobic010G114000--Sobic010G131400 Sobic010G114000--Sobic002G254900 Sobic002G111500 Sobic002G111500 Sobic010G114000--Sobic002G111500 Sobic010G114000--Sobic010G180100 Sobic010G042600 Sobic010G042600 Sobic010G114000--Sobic010G042600 Sobic004G165300 Sobic004G165300 Sobic010G114000--Sobic004G165300
Octagon: transcription factors


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