Gene annotation
Transcriptome id Sobic.001G360700.1
Synonym D501, CYP75B1, Sb01g034460, TT7
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt C5WYQ8
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF55
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology K13083; flavonoid 3',5'-hydroxylase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT5G07990 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os03g25150.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a055168 , Zm00025a052313 , Zm00025a052311 , Zm00025a021329 , Zm00025a031824
Brachypodium KQK21564
Barley HORVU6Hr1G087250.1 , HORVU7Hr1G007580.1 , HORVU7Hr1G007580.2
Wheat TraesCS7D02G036900 , TraesCS7D02G036900 , TraesCS7A02G041200 , TraesCS7A02G041200 , TraesCS7A02G041200 , TraesCS6A02G005400 , TraesCS2D02G504100 , TraesCS6B02G406400 , TraesCS6D02G353200 , TraesCS6B02G011000 , TraesCS6B02G405900 , TraesCS2B02G531600 , TraesCS6B02G011200 , TraesCS6D02G008100 , TraesCS6A02G369700 , TraesCS4A02G446400
Populus -


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cDNA sequences
Sobic.001G360700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
2 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
3 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
4 Sobic.002G203900 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
5 Sobic.001G471800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein-related, putative, expressed -
6 Sobic.002G254900 membrane protein, putative, expressed -
7 Sobic.002G146000 "Localized in cytoplasm, involved in the process of drought defense"(PubMedID : 27231650)@dehydrogenase, putative, expressed K09753: cinnamoyl-CoA reductase
8 Sobic.004G193500 expressed protein -
9 Sobic.001G072600 expressed protein -
10 Sobic.003G255600 expressed protein -
11 Sobic.003G183300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.010G180100 transferase family protein, putative, expressed -
13 Sobic.007G119500 expressed protein -
14 Sobic.009G162300 similar to Putative laccase-11(PubMedID : 29862293)@Laccase LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
15 Sobic.006G180300 ethylene-responsive protein related, putative, expressed -
16 Sobic.001G002800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
17 Sobic.003G426200 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.007G073000 - -
19 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
20 Sobic.002G029600 CBS domain containing membrane protein, putative, expressed K00088: IMPDH, IMP dehydrogenase


Gene co-expression network
sample Sobic001G360700 Sobic001G360700 Sobic004G047600 Sobic004G047600 Sobic001G360700--Sobic004G047600 Sobic007G047300 Sobic007G047300 Sobic001G360700--Sobic007G047300 Sobic002G167600 Sobic002G167600 Sobic001G360700--Sobic002G167600 Sobic002G203900 Sobic002G203900 Sobic001G360700--Sobic002G203900 Sobic001G471800 Sobic001G471800 Sobic001G360700--Sobic001G471800 Sobic002G254900 Sobic002G254900 Sobic001G360700--Sobic002G254900 Sobic002G146000 Sobic002G146000 Sobic001G360700--Sobic002G146000 Sobic004G193500 Sobic004G193500 Sobic001G360700--Sobic004G193500 Sobic001G072600 Sobic001G072600 Sobic001G360700--Sobic001G072600 Sobic004G047600--Sobic001G360700 Sobic003G352700 Sobic003G352700 Sobic004G047600--Sobic003G352700 Sobic004G047600--Sobic007G047300 Sobic004G047600--Sobic001G471800 Sobic004G047600--Sobic002G146000 Sobic004G047600--Sobic002G167600 Sobic004G047600--Sobic002G254900 Sobic004G047600--Sobic002G203900 Sobic009G162300 Sobic009G162300 Sobic004G047600--Sobic009G162300 Sobic007G047300--Sobic001G360700 Sobic007G047300--Sobic004G047600 Sobic007G047300--Sobic009G162300 Sobic007G047300--Sobic003G352700 Sobic007G047300--Sobic001G471800 Sobic004G111100 Sobic004G111100 Sobic007G047300--Sobic004G111100 Sobic007G047300--Sobic002G146000 Sobic002G207200 Sobic002G207200 Sobic007G047300--Sobic002G207200 Sobic007G047300--Sobic002G203900 Sobic002G167600--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic002G167600--Sobic006G144600 Sobic002G167600--Sobic004G047600 Sobic001G406700 Sobic001G406700 Sobic002G167600--Sobic001G406700 Sobic002G167600--Sobic002G203900 Sobic009G170500 Sobic009G170500 Sobic002G167600--Sobic009G170500 Sobic002G167600--Sobic002G254900 Sobic002G167600--Sobic001G072600 Sobic010G180100 Sobic010G180100 Sobic002G167600--Sobic010G180100 Sobic002G203900--Sobic001G360700 Sobic002G203900--Sobic002G167600 Sobic002G203900--Sobic004G047600 Sobic007G090472 Sobic007G090472 Sobic002G203900--Sobic007G090472 Sobic002G203900--Sobic002G146000 Sobic006G135300 Sobic006G135300 Sobic002G203900--Sobic006G135300 Sobic002G203900--Sobic007G047300 Sobic001G360800 Sobic001G360800 Sobic002G203900--Sobic001G360800 Sobic007G073000 Sobic007G073000 Sobic002G203900--Sobic007G073000 Sobic001G471800--Sobic002G146000 Sobic001G471800--Sobic004G047600 Sobic006G224500 Sobic006G224500 Sobic001G471800--Sobic006G224500 Sobic001G471800--Sobic004G193500 Sobic003G183300 Sobic003G183300 Sobic001G471800--Sobic003G183300 Sobic003G255600 Sobic003G255600 Sobic001G471800--Sobic003G255600 Sobic001G471800--Sobic001G360700 Sobic006G031100 Sobic006G031100 Sobic001G471800--Sobic006G031100 Sobic010G093300 Sobic010G093300 Sobic001G471800--Sobic010G093300 Sobic001G002800 Sobic001G002800 Sobic002G254900--Sobic001G002800 Sobic010G096700 Sobic010G096700 Sobic002G254900--Sobic010G096700 Sobic002G254900--Sobic010G180100 Sobic002G254900--Sobic004G047600 Sobic002G254900--Sobic001G360700 Sobic001G503000 Sobic001G503000 Sobic002G254900--Sobic001G503000 Sobic001G506600 Sobic001G506600 Sobic002G254900--Sobic001G506600 Sobic002G254900--Sobic007G090472 Sobic002G254900--Sobic002G167600 Sobic002G146000--Sobic007G073000 Sobic006G092700 Sobic006G092700 Sobic002G146000--Sobic006G092700 Sobic007G037600 Sobic007G037600 Sobic002G146000--Sobic007G037600 Sobic003G353200 Sobic003G353200 Sobic002G146000--Sobic003G353200 Sobic003G000100 Sobic003G000100 Sobic002G146000--Sobic003G000100 Sobic006G085700 Sobic006G085700 Sobic002G146000--Sobic006G085700 Sobic010G031700 Sobic010G031700 Sobic002G146000--Sobic010G031700 Sobic003G215300 Sobic003G215300 Sobic002G146000--Sobic003G215300 Sobic004G106100 Sobic004G106100 Sobic002G146000--Sobic004G106100 Sobic004G193500--Sobic002G146000 Sobic001G274400 Sobic001G274400 Sobic004G193500--Sobic001G274400 Sobic004G193500--Sobic007G073000 Sobic005G177400 Sobic005G177400 Sobic004G193500--Sobic005G177400 Sobic008G164450 Sobic008G164450 Sobic004G193500--Sobic008G164450 Sobic004G193500--Sobic003G255600 Sobic004G193500--Sobic006G135300 Sobic004G193500--Sobic006G092700 Sobic004G193500--Sobic006G224500 Sobic001G072600--Sobic002G167600 Sobic002G218900 Sobic002G218900 Sobic001G072600--Sobic002G218900 Sobic007G119500 Sobic007G119500 Sobic001G072600--Sobic007G119500 Sobic001G072600--Sobic001G360700 Sobic001G072600--Sobic004G047600 Sobic001G072600--Sobic006G144600 Sobic009G246700 Sobic009G246700 Sobic001G072600--Sobic009G246700 Sobic001G072600--Sobic007G047300 Sobic001G072600--Sobic009G170500
Octagon: transcription factors


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