Gene annotation
Transcriptome id Sobic.001G072600.1
Synonym Sb01g006530
Functional annotation expressed protein
UniProt C5WZ50
Pfam PF14383
Panther DB PTHR34282 PTHR34282:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G42710 : -
RAP-DB (Rice) LOC_Os03g56430.1 : expressed protein
MaizeGDB (Corn) Zm00025a016675
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
2 Sobic.002G218900 plant viral response family protein, putative, expressed -
3 Sobic.007G119500 expressed protein -
4 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
5 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
6 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
7 Sobic.009G246700 CAS1 domain-containing protein 1 precursor, putative, expressed -
8 Sobic.007G047300 encodes the lignin biosynthetic enzyme caffeic acid O-methyltransferase (COMT)(PubMedID : 20585750)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methylate the tricin precursors luteolin and selgin(PubMedID : 28594846)@monolignol biosynthetic enzyme caffeic acid O-methyl transferase (COMT)(PubMedID : 12756532)@lignin biosynthesis(PubMedID : 12756532)@key enzymes in the phenylptropanoid pathway(PubMedID : 28119720)@O-methyltransferase, putative, expressed K05279: flavonol 3-O-methyltransferase
9 Sobic.009G170500 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
10 Sobic.002G207200 - -
11 Sobic.001G406700 expressed protein -
12 Sobic.004G111100 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.003G254700 glycosyltransferase family 43 protein, putative, expressed -
14 Sobic.007G009500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@TKL_IRAK_CR4L.6 - The CR4L subfamily has homology with Crinkly4, expressed -
15 Sobic.009G026101 - -
16 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
17 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.009G034300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
19 Sobic.002G203900 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
20 Sobic.001G360800 cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase


Gene co-expression network
sample Sobic001G072600 Sobic001G072600 Sobic002G167600 Sobic002G167600 Sobic001G072600--Sobic002G167600 Sobic002G218900 Sobic002G218900 Sobic001G072600--Sobic002G218900 Sobic007G119500 Sobic007G119500 Sobic001G072600--Sobic007G119500 Sobic001G360700 Sobic001G360700 Sobic001G072600--Sobic001G360700 Sobic004G047600 Sobic004G047600 Sobic001G072600--Sobic004G047600 Sobic006G144600 Sobic006G144600 Sobic001G072600--Sobic006G144600 Sobic009G246700 Sobic009G246700 Sobic001G072600--Sobic009G246700 Sobic007G047300 Sobic007G047300 Sobic001G072600--Sobic007G047300 Sobic009G170500 Sobic009G170500 Sobic001G072600--Sobic009G170500 Sobic002G167600--Sobic001G360700 Sobic002G167600--Sobic006G144600 Sobic002G167600--Sobic004G047600 Sobic001G406700 Sobic001G406700 Sobic002G167600--Sobic001G406700 Sobic002G203900 Sobic002G203900 Sobic002G167600--Sobic002G203900 Sobic002G167600--Sobic009G170500 Sobic002G254900 Sobic002G254900 Sobic002G167600--Sobic002G254900 Sobic002G167600--Sobic001G072600 Sobic010G180100 Sobic010G180100 Sobic002G167600--Sobic010G180100 Sobic002G218900--Sobic001G072600 Sobic002G218900--Sobic004G047600 Sobic002G218900--Sobic001G360700 Sobic002G207200 Sobic002G207200 Sobic002G218900--Sobic002G207200 Sobic003G352700 Sobic003G352700 Sobic002G218900--Sobic003G352700 Sobic002G218900--Sobic007G047300 Sobic002G218900--Sobic001G406700 Sobic002G218900--Sobic006G144600 Sobic002G218900--Sobic007G119500 Sobic007G119500--Sobic009G170500 Sobic003G270400 Sobic003G270400 Sobic007G119500--Sobic003G270400 Sobic007G119500--Sobic004G047600 Sobic007G119500--Sobic001G072600 Sobic007G119500--Sobic002G167600 Sobic003G378800 Sobic003G378800 Sobic007G119500--Sobic003G378800 Sobic007G119500--Sobic001G360700 Sobic007G119500--Sobic006G144600 Sobic007G119500--Sobic001G406700 Sobic001G360700--Sobic004G047600 Sobic001G360700--Sobic007G047300 Sobic001G360700--Sobic002G167600 Sobic001G360700--Sobic002G203900 Sobic001G471800 Sobic001G471800 Sobic001G360700--Sobic001G471800 Sobic001G360700--Sobic002G254900 Sobic002G146000 Sobic002G146000 Sobic001G360700--Sobic002G146000 Sobic004G193500 Sobic004G193500 Sobic001G360700--Sobic004G193500 Sobic001G360700--Sobic001G072600 Sobic004G047600--Sobic001G360700 Sobic004G047600--Sobic003G352700 Sobic004G047600--Sobic007G047300 Sobic004G047600--Sobic001G471800 Sobic004G047600--Sobic002G146000 Sobic004G047600--Sobic002G167600 Sobic004G047600--Sobic002G254900 Sobic004G047600--Sobic002G203900 Sobic009G162300 Sobic009G162300 Sobic004G047600--Sobic009G162300 Sobic006G144600--Sobic001G406700 Sobic010G232500 Sobic010G232500 Sobic006G144600--Sobic010G232500 Sobic003G387500 Sobic003G387500 Sobic006G144600--Sobic003G387500 Sobic006G144600--Sobic002G167600 Sobic006G144600--Sobic009G170500 Sobic001G399200 Sobic001G399200 Sobic006G144600--Sobic001G399200 Sobic005G229100 Sobic005G229100 Sobic006G144600--Sobic005G229100 Sobic006G144600--Sobic007G119500 Sobic007G223600 Sobic007G223600 Sobic006G144600--Sobic007G223600 Sobic001G133900 Sobic001G133900 Sobic009G246700--Sobic001G133900 Sobic009G026101 Sobic009G026101 Sobic009G246700--Sobic009G026101 Sobic009G246700--Sobic001G406700 Sobic009G246700--Sobic007G119500 Sobic009G246700--Sobic001G072600 Sobic009G246700--Sobic002G167600 Sobic009G246700--Sobic001G360700 Sobic001G460400 Sobic001G460400 Sobic009G246700--Sobic001G460400 Sobic009G246700--Sobic006G144600 Sobic007G047300--Sobic001G360700 Sobic007G047300--Sobic004G047600 Sobic007G047300--Sobic009G162300 Sobic007G047300--Sobic003G352700 Sobic007G047300--Sobic001G471800 Sobic004G111100 Sobic004G111100 Sobic007G047300--Sobic004G111100 Sobic007G047300--Sobic002G146000 Sobic007G047300--Sobic002G207200 Sobic007G047300--Sobic002G203900 Sobic009G170500--Sobic001G406700 Sobic009G170500--Sobic002G167600 Sobic009G170500--Sobic007G119500 Sobic009G170500--Sobic006G144600 Sobic009G170500--Sobic003G387500 Sobic006G180300 Sobic006G180300 Sobic009G170500--Sobic006G180300 Sobic009G170500--Sobic004G047600 Sobic008G014700 Sobic008G014700 Sobic009G170500--Sobic008G014700 Sobic009G170500--Sobic010G232500
Octagon: transcription factors


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