Gene annotation
Transcriptome id Sobic.003G387500.1
Synonym IQD14, Sb03g042570
Functional annotation IQ calmodulin-binding motif domain containing protein, expressed
UniProt C5XET8
Pfam PF00612
Panther DB PTHR32295 PTHR32295:SF18
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G43680 : IQ-domain 14
RAP-DB (Rice) LOC_Os01g67090.1 : IQ calmodulin-binding motif domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039455
Brachypodium KQK11008
Barley HORVU3Hr1G089690.3 , HORVU3Hr1G089690.2 , HORVU3Hr1G089690.1 , HORVU3Hr1G089690.7 , HORVU3Hr1G089690.6 , HORVU3Hr1G089690.5 , HORVU3Hr1G089690.4 , HORVU3Hr1G089690.8
Wheat TraesCS3A02G398900 , TraesCS3B02G431200 , TraesCS3D02G392900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G406700 expressed protein -
2 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
3 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
4 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
6 Sobic.009G170500 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
7 Sobic.009G162700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exostosin family domain containing protein, expressed -
8 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
9 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
10 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
11 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
12 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
13 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
14 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
15 Sobic.010G180100 transferase family protein, putative, expressed -
16 Sobic.010G022400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
17 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
18 Sobic.009G048000 villin, putative, expressed K08017: advillin
19 Sobic.004G047600 plant-specific domain TIGR01627 family protein, expressed -
20 Sobic.001G360700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase


Gene co-expression network
sample Sobic003G387500 Sobic003G387500 Sobic001G406700 Sobic001G406700 Sobic003G387500--Sobic001G406700 Sobic006G144600 Sobic006G144600 Sobic003G387500--Sobic006G144600 Sobic001G224300 Sobic001G224300 Sobic003G387500--Sobic001G224300 Sobic010G232500 Sobic010G232500 Sobic003G387500--Sobic010G232500 Sobic002G167600 Sobic002G167600 Sobic003G387500--Sobic002G167600 Sobic009G170500 Sobic009G170500 Sobic003G387500--Sobic009G170500 Sobic009G162700 Sobic009G162700 Sobic003G387500--Sobic009G162700 Sobic002G205500 Sobic002G205500 Sobic003G387500--Sobic002G205500 Sobic009G226900 Sobic009G226900 Sobic003G387500--Sobic009G226900 Sobic001G406700--Sobic003G387500 Sobic001G406700--Sobic006G144600 Sobic001G399200 Sobic001G399200 Sobic001G406700--Sobic001G399200 Sobic001G406700--Sobic009G170500 Sobic001G406700--Sobic010G232500 Sobic001G406700--Sobic002G167600 Sobic005G229100 Sobic005G229100 Sobic001G406700--Sobic005G229100 Sobic007G119500 Sobic007G119500 Sobic001G406700--Sobic007G119500 Sobic009G246700 Sobic009G246700 Sobic001G406700--Sobic009G246700 Sobic006G144600--Sobic001G406700 Sobic006G144600--Sobic010G232500 Sobic006G144600--Sobic003G387500 Sobic006G144600--Sobic002G167600 Sobic006G144600--Sobic009G170500 Sobic006G144600--Sobic001G399200 Sobic006G144600--Sobic005G229100 Sobic006G144600--Sobic007G119500 Sobic007G223600 Sobic007G223600 Sobic006G144600--Sobic007G223600 Sobic003G296400 Sobic003G296400 Sobic001G224300--Sobic003G296400 Sobic001G224300--Sobic002G205500 Sobic006G036400 Sobic006G036400 Sobic001G224300--Sobic006G036400 Sobic001G224300--Sobic003G387500 Sobic001G224300--Sobic009G226900 Sobic001G224300--Sobic007G223600 Sobic009G034300 Sobic009G034300 Sobic001G224300--Sobic009G034300 Sobic004G221300 Sobic004G221300 Sobic001G224300--Sobic004G221300 Sobic001G409100 Sobic001G409100 Sobic001G224300--Sobic001G409100 Sobic010G232500--Sobic006G144600 Sobic010G232500--Sobic001G406700 Sobic010G232500--Sobic005G229100 Sobic010G232500--Sobic003G387500 Sobic006G226200 Sobic006G226200 Sobic010G232500--Sobic006G226200 Sobic010G232500--Sobic002G167600 Sobic010G232500--Sobic001G399200 Sobic003G231500 Sobic003G231500 Sobic010G232500--Sobic003G231500 Sobic010G232500--Sobic007G223600 Sobic001G360700 Sobic001G360700 Sobic002G167600--Sobic001G360700 Sobic002G167600--Sobic006G144600 Sobic004G047600 Sobic004G047600 Sobic002G167600--Sobic004G047600 Sobic002G167600--Sobic001G406700 Sobic002G203900 Sobic002G203900 Sobic002G167600--Sobic002G203900 Sobic002G167600--Sobic009G170500 Sobic002G254900 Sobic002G254900 Sobic002G167600--Sobic002G254900 Sobic001G072600 Sobic001G072600 Sobic002G167600--Sobic001G072600 Sobic010G180100 Sobic010G180100 Sobic002G167600--Sobic010G180100 Sobic009G170500--Sobic001G406700 Sobic009G170500--Sobic002G167600 Sobic009G170500--Sobic007G119500 Sobic009G170500--Sobic006G144600 Sobic009G170500--Sobic003G387500 Sobic006G180300 Sobic006G180300 Sobic009G170500--Sobic006G180300 Sobic009G170500--Sobic004G047600 Sobic008G014700 Sobic008G014700 Sobic009G170500--Sobic008G014700 Sobic009G170500--Sobic010G232500 Sobic009G162700--Sobic003G387500 Sobic009G162700--Sobic006G144600 Sobic009G162700--Sobic001G406700 Sobic009G162700--Sobic010G232500 Sobic009G162700--Sobic002G167600 Sobic009G162700--Sobic002G205500 Sobic009G162700--Sobic001G224300 Sobic008G137000 Sobic008G137000 Sobic009G162700--Sobic008G137000 Sobic002G352000 Sobic002G352000 Sobic009G162700--Sobic002G352000 Sobic002G205500--Sobic003G296400 Sobic002G205500--Sobic001G224300 Sobic002G205500--Sobic007G223600 Sobic002G205500--Sobic006G226200 Sobic002G205500--Sobic005G229100 Sobic002G205500--Sobic003G387500 Sobic009G048000 Sobic009G048000 Sobic002G205500--Sobic009G048000 Sobic002G205500--Sobic006G036400 Sobic002G205500--Sobic009G226900 Sobic003G062000 Sobic003G062000 Sobic009G226900--Sobic003G062000 Sobic009G226900--Sobic001G224300 Sobic009G226900--Sobic003G296400 Sobic009G226900--Sobic002G205500 Sobic009G226900--Sobic003G387500 Sobic009G226900--Sobic006G036400 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic006G075000 Sobic006G075000 Sobic009G226900--Sobic006G075000
Octagon: transcription factors


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