Gene annotation
Transcriptome id Sobic.010G232500.1
Synonym RCI3A, Sb10g027490, RCI3
Functional annotation peroxidase precursor, putative, expressed
UniProt C5Z864
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF39
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT1G05260 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os06g46799.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a055308 , Zm00025a034847 , Zm00025a018141 , Zm00025a044843 , Zm00025a018299 , Zm00025a024385
Brachypodium KQK04186 , KQJ83029 , KQK14347 , KQK07692 , KQK18052 , KQK17174
Barley HORVU7Hr1G102480.8 , HORVU7Hr1G102480.4 , HORVU7Hr1G102480.5 , HORVU7Hr1G102480.6 , HORVU7Hr1G102480.1 , HORVU7Hr1G102480.2 , HORVU7Hr1G102480.3 , HORVU7Hr1G102480.7 , HORVU6Hr1G026230.5 , HORVU6Hr1G026230.4 , HORVU6Hr1G026230.1 , HORVU1Hr1G054640.1 , HORVU1Hr1G016770.1
Wheat TraesCS7D02G369400 , TraesCS1B02G096200 , TraesCS1A02G078200 , TraesCS7B02G274900 , TraesCS7B02G353100 , TraesCS7B02G353100 , TraesCS2A02G037700 , TraesCS1D02G080300 , TraesCS7B02G353200 , TraesCS7B02G353200 , TraesCS6B02G164400 , TraesCS6B02G164400 , TraesCS7A02G353300 , TraesCS5A02G516300 , TraesCS4B02G347700 , TraesCS7A02G452900 , TraesCS7D02G369900 , TraesCS7A02G124300 , TraesCS7A02G453000 , TraesCS7D02G122000 , TraesCS1A02G078100 , TraesCS6A02G136500 , TraesCS7B02G274200 , TraesCS7D02G442200 , TraesCS7B02G023100 , TraesCS1D02G080400 , TraesCS7D02G442300
Populus -


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cDNA sequences
Sobic.010G232500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
2 Sobic.001G406700 expressed protein -
3 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
4 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
5 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
6 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
7 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
8 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
9 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
10 Sobic.009G170500 metal cation transporter, putative, expressed K14709: SLC39A1_2_3, solute carrier family 39 (zinc transporter), member 1/2/3
11 Sobic.006G209300 transferase family domain containing protein, expressed -
12 Sobic.003G180400 "domain confirmed by Pfam database, expressed in leaf, flower and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@MDR-like ABC transporter, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
13 Sobic.009G162700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exostosin family domain containing protein, expressed -
14 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
15 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
16 Sobic.009G048000 villin, putative, expressed K08017: advillin
17 Sobic.003G236701 - -
18 Sobic.009G034300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
19 Sobic.001G362100 nodulation protein-related, putative, expressed -
20 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A


Gene co-expression network
sample Sobic010G232500 Sobic010G232500 Sobic006G144600 Sobic006G144600 Sobic010G232500--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic010G232500--Sobic001G406700 Sobic005G229100 Sobic005G229100 Sobic010G232500--Sobic005G229100 Sobic003G387500 Sobic003G387500 Sobic010G232500--Sobic003G387500 Sobic006G226200 Sobic006G226200 Sobic010G232500--Sobic006G226200 Sobic002G167600 Sobic002G167600 Sobic010G232500--Sobic002G167600 Sobic001G399200 Sobic001G399200 Sobic010G232500--Sobic001G399200 Sobic003G231500 Sobic003G231500 Sobic010G232500--Sobic003G231500 Sobic007G223600 Sobic007G223600 Sobic010G232500--Sobic007G223600 Sobic006G144600--Sobic001G406700 Sobic006G144600--Sobic010G232500 Sobic006G144600--Sobic003G387500 Sobic006G144600--Sobic002G167600 Sobic009G170500 Sobic009G170500 Sobic006G144600--Sobic009G170500 Sobic006G144600--Sobic001G399200 Sobic006G144600--Sobic005G229100 Sobic007G119500 Sobic007G119500 Sobic006G144600--Sobic007G119500 Sobic006G144600--Sobic007G223600 Sobic001G406700--Sobic003G387500 Sobic001G406700--Sobic006G144600 Sobic001G406700--Sobic001G399200 Sobic001G406700--Sobic009G170500 Sobic001G406700--Sobic010G232500 Sobic001G406700--Sobic002G167600 Sobic001G406700--Sobic005G229100 Sobic001G406700--Sobic007G119500 Sobic009G246700 Sobic009G246700 Sobic001G406700--Sobic009G246700 Sobic005G229100--Sobic007G223600 Sobic005G229100--Sobic010G232500 Sobic002G205500 Sobic002G205500 Sobic005G229100--Sobic002G205500 Sobic005G229100--Sobic006G144600 Sobic005G229100--Sobic001G406700 Sobic002G164600 Sobic002G164600 Sobic005G229100--Sobic002G164600 Sobic005G229100--Sobic006G226200 Sobic005G229100--Sobic003G387500 Sobic005G229100--Sobic001G399200 Sobic003G387500--Sobic001G406700 Sobic003G387500--Sobic006G144600 Sobic001G224300 Sobic001G224300 Sobic003G387500--Sobic001G224300 Sobic003G387500--Sobic010G232500 Sobic003G387500--Sobic002G167600 Sobic003G387500--Sobic009G170500 Sobic009G162700 Sobic009G162700 Sobic003G387500--Sobic009G162700 Sobic003G387500--Sobic002G205500 Sobic009G226900 Sobic009G226900 Sobic003G387500--Sobic009G226900 Sobic003G236701 Sobic003G236701 Sobic006G226200--Sobic003G236701 Sobic006G066500 Sobic006G066500 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic003G112200 Sobic003G112200 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic003G296400 Sobic003G296400 Sobic006G226200--Sobic003G296400 Sobic009G048000 Sobic009G048000 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic006G226200--Sobic002G205500 Sobic001G360700 Sobic001G360700 Sobic002G167600--Sobic001G360700 Sobic002G167600--Sobic006G144600 Sobic004G047600 Sobic004G047600 Sobic002G167600--Sobic004G047600 Sobic002G167600--Sobic001G406700 Sobic002G203900 Sobic002G203900 Sobic002G167600--Sobic002G203900 Sobic002G167600--Sobic009G170500 Sobic002G254900 Sobic002G254900 Sobic002G167600--Sobic002G254900 Sobic001G072600 Sobic001G072600 Sobic002G167600--Sobic001G072600 Sobic010G180100 Sobic010G180100 Sobic002G167600--Sobic010G180100 Sobic001G399200--Sobic001G406700 Sobic001G399200--Sobic006G144600 Sobic001G399200--Sobic010G232500 Sobic001G399200--Sobic003G387500 Sobic001G399200--Sobic005G229100 Sobic001G362100 Sobic001G362100 Sobic001G399200--Sobic001G362100 Sobic001G399200--Sobic007G223600 Sobic001G399200--Sobic006G226200 Sobic001G399200--Sobic009G170500 Sobic001G238600 Sobic001G238600 Sobic003G231500--Sobic001G238600 Sobic003G231500--Sobic003G236701 Sobic003G231500--Sobic006G066500 Sobic001G422300 Sobic001G422300 Sobic003G231500--Sobic001G422300 Sobic003G231500--Sobic006G226200 Sobic003G220000 Sobic003G220000 Sobic003G231500--Sobic003G220000 Sobic006G209300 Sobic006G209300 Sobic003G231500--Sobic006G209300 Sobic007G175400 Sobic007G175400 Sobic003G231500--Sobic007G175400 Sobic008G126000 Sobic008G126000 Sobic003G231500--Sobic008G126000 Sobic007G223600--Sobic002G164600 Sobic007G223600--Sobic002G205500 Sobic007G223600--Sobic006G226200 Sobic007G223600--Sobic003G236701 Sobic007G223600--Sobic003G296400 Sobic007G223600--Sobic005G229100 Sobic007G223600--Sobic006G066500 Sobic007G223600--Sobic001G224300 Sobic008G059800 Sobic008G059800 Sobic007G223600--Sobic008G059800
Octagon: transcription factors


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