Gene annotation
Transcriptome id Sobic.003G231500.2,Sobic.003G231500.1
Synonym Sb03g028930, PE11, ATPE11
Functional annotation pectinesterase, putative, expressed
UniProt A0A1B6Q4W0 , A0A1B6Q4W1
Pfam PF01095
Panther DB PTHR31321 PTHR31321:SF10 PTHR31321:SF10 PTHR31321
NCBI CDD -
KEGG Orthology K01051; pectinesterase
Gene Ontology GO:0005618; cell wall GO:0005618cell wall


Orthologs (automatic annotation)
TAIR AT2G21610 : pectinesterase 11
RAP-DB (Rice) LOC_Os01g44340.1 : pectinesterase, putative, expressed
MaizeGDB (Corn) Zm00025a038643
Brachypodium PNT72448
Barley -
Wheat TraesCS3A02G226400 , TraesCS3B02G258100 , TraesCS3B02G258100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G238600 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.003G236701 - -
3 Sobic.006G066500 expressed protein -
4 Sobic.001G422300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
5 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
6 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
7 Sobic.006G209300 transferase family domain containing protein, expressed -
8 Sobic.007G175400 carrier, putative, expressed -
9 Sobic.008G126000 calmodulin binding protein, putative, expressed -
10 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.002G332300 expressed protein -
12 Sobic.003G112200 Cupin domain containing protein, expressed -
13 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
14 Sobic.005G085901 - -
15 Sobic.009G069100 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
16 Sobic.010G180000 - -
17 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
18 Sobic.010G232000 RIC10, putative, expressed -
19 Sobic.008G010400 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.003G040400 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G231500 Sobic003G231500 Sobic001G238600 Sobic001G238600 Sobic003G231500--Sobic001G238600 Sobic003G236701 Sobic003G236701 Sobic003G231500--Sobic003G236701 Sobic006G066500 Sobic006G066500 Sobic003G231500--Sobic006G066500 Sobic001G422300 Sobic001G422300 Sobic003G231500--Sobic001G422300 Sobic006G226200 Sobic006G226200 Sobic003G231500--Sobic006G226200 Sobic003G220000 Sobic003G220000 Sobic003G231500--Sobic003G220000 Sobic006G209300 Sobic006G209300 Sobic003G231500--Sobic006G209300 Sobic007G175400 Sobic007G175400 Sobic003G231500--Sobic007G175400 Sobic008G126000 Sobic008G126000 Sobic003G231500--Sobic008G126000 Sobic001G238600--Sobic003G231500 Sobic001G238600--Sobic001G422300 Sobic002G332300 Sobic002G332300 Sobic001G238600--Sobic002G332300 Sobic001G238600--Sobic007G175400 Sobic001G238600--Sobic003G220000 Sobic001G238600--Sobic006G066500 Sobic010G232000 Sobic010G232000 Sobic001G238600--Sobic010G232000 Sobic008G010400 Sobic008G010400 Sobic001G238600--Sobic008G010400 Sobic005G011100 Sobic005G011100 Sobic001G238600--Sobic005G011100 Sobic003G236701--Sobic006G066500 Sobic002G164600 Sobic002G164600 Sobic003G236701--Sobic002G164600 Sobic009G241600 Sobic009G241600 Sobic003G236701--Sobic009G241600 Sobic003G236701--Sobic006G226200 Sobic003G112200 Sobic003G112200 Sobic003G236701--Sobic003G112200 Sobic007G223600 Sobic007G223600 Sobic003G236701--Sobic007G223600 Sobic008G059800 Sobic008G059800 Sobic003G236701--Sobic008G059800 Sobic003G236701--Sobic003G231500 Sobic003G236701--Sobic001G238600 Sobic006G066500--Sobic003G236701 Sobic006G066500--Sobic001G422300 Sobic006G066500--Sobic006G226200 Sobic006G066500--Sobic003G112200 Sobic004G125400 Sobic004G125400 Sobic006G066500--Sobic004G125400 Sobic006G066500--Sobic001G238600 Sobic006G066500--Sobic003G231500 Sobic006G066500--Sobic003G220000 Sobic006G066500--Sobic008G010400 Sobic001G422300--Sobic008G010400 Sobic010G152900 Sobic010G152900 Sobic001G422300--Sobic010G152900 Sobic001G422300--Sobic007G175400 Sobic001G422300--Sobic005G011100 Sobic001G422300--Sobic006G066500 Sobic001G422300--Sobic004G125400 Sobic001G422300--Sobic001G238600 Sobic009G069100 Sobic009G069100 Sobic001G422300--Sobic009G069100 Sobic004G293800 Sobic004G293800 Sobic001G422300--Sobic004G293800 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic003G296400 Sobic003G296400 Sobic006G226200--Sobic003G296400 Sobic009G048000 Sobic009G048000 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic002G205500 Sobic002G205500 Sobic006G226200--Sobic002G205500 Sobic003G220000--Sobic001G238600 Sobic003G220000--Sobic006G066500 Sobic003G220000--Sobic003G231500 Sobic003G220000--Sobic001G422300 Sobic003G220000--Sobic008G010400 Sobic003G220000--Sobic003G112200 Sobic003G220000--Sobic006G226200 Sobic003G220000--Sobic003G236701 Sobic003G220000--Sobic007G175400 Sobic006G209300--Sobic003G231500 Sobic006G209300--Sobic002G164600 Sobic006G209300--Sobic003G236701 Sobic006G209300--Sobic006G226200 Sobic010G232500 Sobic010G232500 Sobic006G209300--Sobic010G232500 Sobic006G209300--Sobic007G223600 Sobic006G209300--Sobic006G066500 Sobic006G209300--Sobic003G112200 Sobic006G209300--Sobic008G059800 Sobic007G175400--Sobic010G152900 Sobic003G040400 Sobic003G040400 Sobic007G175400--Sobic003G040400 Sobic009G116300 Sobic009G116300 Sobic007G175400--Sobic009G116300 Sobic001G332050 Sobic001G332050 Sobic007G175400--Sobic001G332050 Sobic010G180000 Sobic010G180000 Sobic008G126000--Sobic010G180000 Sobic001G266900 Sobic001G266900 Sobic008G126000--Sobic001G266900 Sobic008G126000--Sobic009G069100 Sobic008G138300 Sobic008G138300 Sobic008G126000--Sobic008G138300 Sobic008G126000--Sobic003G040400 Sobic004G167000 Sobic004G167000 Sobic008G126000--Sobic004G167000 Sobic010G159500 Sobic010G159500 Sobic008G126000--Sobic010G159500 Sobic008G087300 Sobic008G087300 Sobic008G126000--Sobic008G087300 Sobic003G239400 Sobic003G239400 Sobic008G126000--Sobic003G239400
Octagon: transcription factors


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