Gene annotation
Transcriptome id Sobic.002G332300.1
Synonym Sb02g035850
Functional annotation expressed protein
UniProt C5XAW0
Pfam -
Panther DB PTHR34558 PTHR34558:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G09280 : -
RAP-DB (Rice) LOC_Os07g36430.1 : expressed protein
MaizeGDB (Corn) Zm00025a014865 , Zm00025a048334
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G087300 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
2 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
3 Sobic.001G238600 zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.010G180000 - -
5 Sobic.007G175400 carrier, putative, expressed -
6 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
7 Sobic.008G126000 calmodulin binding protein, putative, expressed -
8 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
10 Sobic.010G232000 RIC10, putative, expressed -
11 Sobic.001G422300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.005G110538 - K08818: cell division cycle 2-like
13 Sobic.010G195800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamoyl-CoA reductase family (At)(PubMedID : 27208977)@reductase, putative, expressed -
14 Sobic.005G011100 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.007G162200 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.008G138300 expressed protein -
17 Sobic.010G152900 beta-D-xylosidase, putative, expressed -
18 Sobic.004G125400 isochorismatase family protein, putative, expressed -
19 Sobic.007G068700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
20 Sobic.003G040400 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic002G332300 Sobic002G332300 Sobic008G087300 Sobic008G087300 Sobic002G332300--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic002G332300--Sobic004G167000 Sobic001G238600 Sobic001G238600 Sobic002G332300--Sobic001G238600 Sobic010G180000 Sobic010G180000 Sobic002G332300--Sobic010G180000 Sobic007G175400 Sobic007G175400 Sobic002G332300--Sobic007G175400 Sobic008G008200 Sobic008G008200 Sobic002G332300--Sobic008G008200 Sobic008G126000 Sobic008G126000 Sobic002G332300--Sobic008G126000 Sobic001G266900 Sobic001G266900 Sobic002G332300--Sobic001G266900 Sobic009G239800 Sobic009G239800 Sobic002G332300--Sobic009G239800 Sobic008G087300--Sobic004G167000 Sobic008G087300--Sobic001G266900 Sobic008G087300--Sobic008G008200 Sobic008G087300--Sobic010G180000 Sobic008G138300 Sobic008G138300 Sobic008G087300--Sobic008G138300 Sobic010G159500 Sobic010G159500 Sobic008G087300--Sobic010G159500 Sobic008G087300--Sobic009G239800 Sobic003G239400 Sobic003G239400 Sobic008G087300--Sobic003G239400 Sobic008G087300--Sobic008G126000 Sobic004G167000--Sobic008G087300 Sobic004G167000--Sobic001G266900 Sobic004G167000--Sobic008G008200 Sobic004G167000--Sobic010G180000 Sobic004G167000--Sobic008G138300 Sobic004G167000--Sobic010G159500 Sobic007G064600 Sobic007G064600 Sobic004G167000--Sobic007G064600 Sobic004G167000--Sobic003G239400 Sobic003G040400 Sobic003G040400 Sobic004G167000--Sobic003G040400 Sobic003G231500 Sobic003G231500 Sobic001G238600--Sobic003G231500 Sobic001G422300 Sobic001G422300 Sobic001G238600--Sobic001G422300 Sobic001G238600--Sobic002G332300 Sobic001G238600--Sobic007G175400 Sobic003G220000 Sobic003G220000 Sobic001G238600--Sobic003G220000 Sobic006G066500 Sobic006G066500 Sobic001G238600--Sobic006G066500 Sobic010G232000 Sobic010G232000 Sobic001G238600--Sobic010G232000 Sobic008G010400 Sobic008G010400 Sobic001G238600--Sobic008G010400 Sobic005G011100 Sobic005G011100 Sobic001G238600--Sobic005G011100 Sobic010G180000--Sobic008G138300 Sobic010G180000--Sobic001G266900 Sobic003G162500 Sobic003G162500 Sobic010G180000--Sobic003G162500 Sobic010G180000--Sobic008G008200 Sobic010G180000--Sobic004G167000 Sobic004G090700 Sobic004G090700 Sobic010G180000--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic010G180000--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic010G180000--Sobic004G159200 Sobic010G180000--Sobic008G087300 Sobic010G152900 Sobic010G152900 Sobic007G175400--Sobic010G152900 Sobic007G175400--Sobic003G040400 Sobic009G116300 Sobic009G116300 Sobic007G175400--Sobic009G116300 Sobic001G332050 Sobic001G332050 Sobic007G175400--Sobic001G332050 Sobic008G008200--Sobic008G087300 Sobic008G008200--Sobic004G167000 Sobic008G008200--Sobic010G180000 Sobic008G008200--Sobic001G266900 Sobic008G008200--Sobic009G239800 Sobic007G068700 Sobic007G068700 Sobic008G008200--Sobic007G068700 Sobic008G008200--Sobic008G138300 Sobic008G008200--Sobic003G162500 Sobic008G008200--Sobic010G159500 Sobic008G126000--Sobic010G180000 Sobic008G126000--Sobic001G266900 Sobic009G069100 Sobic009G069100 Sobic008G126000--Sobic009G069100 Sobic008G126000--Sobic008G138300 Sobic008G126000--Sobic003G040400 Sobic008G126000--Sobic004G167000 Sobic008G126000--Sobic010G159500 Sobic008G126000--Sobic008G087300 Sobic008G126000--Sobic003G239400 Sobic001G266900--Sobic004G167000 Sobic001G266900--Sobic008G138300 Sobic001G266900--Sobic008G087300 Sobic001G266900--Sobic010G159500 Sobic001G266900--Sobic003G239400 Sobic001G266900--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic001G266900--Sobic003G206000 Sobic010G200000 Sobic010G200000 Sobic001G266900--Sobic010G200000 Sobic001G266900--Sobic001G332050 Sobic009G239800--Sobic008G008200 Sobic009G239800--Sobic008G087300 Sobic009G239800--Sobic004G167000 Sobic001G303750 Sobic001G303750 Sobic009G239800--Sobic001G303750 Sobic009G239800--Sobic010G180000 Sobic009G239800--Sobic001G266900 Sobic009G239800--Sobic007G068700 Sobic010G108100 Sobic010G108100 Sobic009G239800--Sobic010G108100 Sobic009G239800--Sobic008G138300
Octagon: transcription factors


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