Gene annotation
Transcriptome id Sobic.008G008200.2
Synonym
Functional annotation TMS membrane protein/tumour differentially expressed protein, putative, expressed
UniProt A0A1B6PAM9
Pfam -
Panther DB PTHR10383 PTHR10383:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane


Orthologs (automatic annotation)
TAIR AT3G24460 : Serinc-domain containing serine and sphingolipid biosynthesis protein
RAP-DB (Rice) LOC_Os01g08460.1 : TMS membrane protein/tumour differentially expressed protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G087300 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
2 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
3 Sobic.010G180000 - -
4 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
6 Sobic.007G068700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
7 Sobic.008G138300 expressed protein -
8 Sobic.003G162500 expressed protein -
9 Sobic.010G159500 LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
10 Sobic.007G073300 OsSCP38 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
11 Sobic.001G303750 - -
12 Sobic.008G126000 calmodulin binding protein, putative, expressed -
13 Sobic.004G090700 - -
14 Sobic.003G206200 THION27 - Plant thionin family protein precursor, expressed -
15 Sobic.007G064600 cytochrome P450, putative, expressed -
16 Sobic.004G159200 LEML2 - Anther-specific LEM1 family protein precursor, expressed -
17 Sobic.003G413400 LEML1 - Anther-specific LEM1 family protein precursor, expressed -
18 Sobic.006G251301 - -
19 Sobic.008G189800 CHCH domain containing protein, expressed -
20 Sobic.002G129600 LTPL62 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic008G008200 Sobic008G008200 Sobic008G087300 Sobic008G087300 Sobic008G008200--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic008G008200--Sobic004G167000 Sobic010G180000 Sobic010G180000 Sobic008G008200--Sobic010G180000 Sobic001G266900 Sobic001G266900 Sobic008G008200--Sobic001G266900 Sobic009G239800 Sobic009G239800 Sobic008G008200--Sobic009G239800 Sobic007G068700 Sobic007G068700 Sobic008G008200--Sobic007G068700 Sobic008G138300 Sobic008G138300 Sobic008G008200--Sobic008G138300 Sobic003G162500 Sobic003G162500 Sobic008G008200--Sobic003G162500 Sobic010G159500 Sobic010G159500 Sobic008G008200--Sobic010G159500 Sobic008G087300--Sobic004G167000 Sobic008G087300--Sobic001G266900 Sobic008G087300--Sobic008G008200 Sobic008G087300--Sobic010G180000 Sobic008G087300--Sobic008G138300 Sobic008G087300--Sobic010G159500 Sobic008G087300--Sobic009G239800 Sobic003G239400 Sobic003G239400 Sobic008G087300--Sobic003G239400 Sobic008G126000 Sobic008G126000 Sobic008G087300--Sobic008G126000 Sobic004G167000--Sobic008G087300 Sobic004G167000--Sobic001G266900 Sobic004G167000--Sobic008G008200 Sobic004G167000--Sobic010G180000 Sobic004G167000--Sobic008G138300 Sobic004G167000--Sobic010G159500 Sobic007G064600 Sobic007G064600 Sobic004G167000--Sobic007G064600 Sobic004G167000--Sobic003G239400 Sobic003G040400 Sobic003G040400 Sobic004G167000--Sobic003G040400 Sobic010G180000--Sobic008G138300 Sobic010G180000--Sobic001G266900 Sobic010G180000--Sobic003G162500 Sobic010G180000--Sobic008G008200 Sobic010G180000--Sobic004G167000 Sobic004G090700 Sobic004G090700 Sobic010G180000--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic010G180000--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic010G180000--Sobic004G159200 Sobic010G180000--Sobic008G087300 Sobic001G266900--Sobic004G167000 Sobic001G266900--Sobic008G138300 Sobic001G266900--Sobic008G087300 Sobic001G266900--Sobic010G159500 Sobic001G266900--Sobic003G239400 Sobic009G116300 Sobic009G116300 Sobic001G266900--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic001G266900--Sobic003G206000 Sobic010G200000 Sobic010G200000 Sobic001G266900--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic001G266900--Sobic001G332050 Sobic009G239800--Sobic008G008200 Sobic009G239800--Sobic008G087300 Sobic009G239800--Sobic004G167000 Sobic001G303750 Sobic001G303750 Sobic009G239800--Sobic001G303750 Sobic009G239800--Sobic010G180000 Sobic009G239800--Sobic001G266900 Sobic009G239800--Sobic007G068700 Sobic010G108100 Sobic010G108100 Sobic009G239800--Sobic010G108100 Sobic009G239800--Sobic008G138300 Sobic007G068700--Sobic008G008200 Sobic007G068700--Sobic010G180000 Sobic007G068700--Sobic009G239800 Sobic002G305400 Sobic002G305400 Sobic007G068700--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic007G068700--Sobic009G087900 Sobic007G068700--Sobic004G167000 Sobic003G206100 Sobic003G206100 Sobic007G068700--Sobic003G206100 Sobic007G068700--Sobic008G087300 Sobic001G153800 Sobic001G153800 Sobic007G068700--Sobic001G153800 Sobic003G413400 Sobic003G413400 Sobic008G138300--Sobic003G413400 Sobic002G129600 Sobic002G129600 Sobic008G138300--Sobic002G129600 Sobic008G138300--Sobic004G159200 Sobic008G138300--Sobic003G206200 Sobic008G138300--Sobic004G090700 Sobic003G206300 Sobic003G206300 Sobic008G138300--Sobic003G206300 Sobic008G138300--Sobic010G159500 Sobic008G138300--Sobic009G116300 Sobic007G073300 Sobic007G073300 Sobic008G138300--Sobic007G073300 Sobic003G162500--Sobic004G090700 Sobic008G189800 Sobic008G189800 Sobic003G162500--Sobic008G189800 Sobic003G162500--Sobic003G206200 Sobic003G162500--Sobic004G159200 Sobic003G162500--Sobic003G413400 Sobic006G251301 Sobic006G251301 Sobic003G162500--Sobic006G251301 Sobic003G162500--Sobic003G206100 Sobic003G162500--Sobic008G138300 Sobic003G162500--Sobic002G129600 Sobic010G159500--Sobic008G138300 Sobic010G159500--Sobic009G116300 Sobic010G159500--Sobic003G206300 Sobic010G159500--Sobic010G200000 Sobic010G159500--Sobic003G206000 Sobic010G159500--Sobic001G332050
Octagon: transcription factors


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