Gene annotation
Transcriptome id Sobic.008G087300.2,Sobic.008G087300.1
Synonym Sb08g009110
Functional annotation 3-oxoacyl-reductase, chloroplast precursor, putative, expressed
UniProt A0A1B6PCL8 , A0A1B6PCH9
Pfam PF13561 PF08659
Panther DB PTHR24322 PTHR24322:SF569
NCBI CDD KOG1200; Mitochondrial/plastidial beta-ketoacyl-ACP reductase KOG0725Reductases with broad range of substrate specificities
KEGG Orthology K00059; fabG, 3-oxoacyl-[acyl-carrier protein] reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G24360 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os12g13930.1 : 3-oxoacyl-reductase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051427
Brachypodium PNT65266 , PNT65263 , PNT65262 , PNT65268
Barley HORVU5Hr1G110540.6 , HORVU5Hr1G110540.1 , HORVU5Hr1G110540.2 , HORVU5Hr1G110540.3 , HORVU5Hr1G110540.4 , HORVU5Hr1G110540.5
Wheat TraesCS5B02G472900 , TraesCS5D02G474500 , TraesCS5A02G461900 , TraesCS5A02G461900 , TraesCS5B02G472200 , TraesCS5D02G474500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
2 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
4 Sobic.010G180000 - -
5 Sobic.008G138300 expressed protein -
6 Sobic.010G159500 LTPL5 - Protease inhibitor/seed storage/LTP family protein precursor, putative, expressed -
7 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
8 Sobic.003G239400 wax synthase isoform 3, putative, expressed -
9 Sobic.008G126000 calmodulin binding protein, putative, expressed -
10 Sobic.003G040400 cytochrome P450, putative, expressed -
11 Sobic.007G064600 cytochrome P450, putative, expressed -
12 Sobic.009G116300 OsSub46 - Putative Subtilisin homologue, expressed -
13 Sobic.003G206000 THION27 - Plant thionin family protein precursor, expressed -
14 Sobic.010G200000 triacylglycerol lipase precursor, putative, expressed K01052: lysosomal acid lipase/cholesteryl ester hydrolase
15 Sobic.001G332050 - -
16 Sobic.001G332050 - -
17 Sobic.001G332050 - -
18 Sobic.001G332050 - -
19 Sobic.001G332050 - -
20 Sobic.001G332050 - -


Gene co-expression network
sample Sobic008G087300 Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic008G087300--Sobic004G167000 Sobic001G266900 Sobic001G266900 Sobic008G087300--Sobic001G266900 Sobic008G008200 Sobic008G008200 Sobic008G087300--Sobic008G008200 Sobic010G180000 Sobic010G180000 Sobic008G087300--Sobic010G180000 Sobic008G138300 Sobic008G138300 Sobic008G087300--Sobic008G138300 Sobic010G159500 Sobic010G159500 Sobic008G087300--Sobic010G159500 Sobic009G239800 Sobic009G239800 Sobic008G087300--Sobic009G239800 Sobic003G239400 Sobic003G239400 Sobic008G087300--Sobic003G239400 Sobic008G126000 Sobic008G126000 Sobic008G087300--Sobic008G126000 Sobic004G167000--Sobic008G087300 Sobic004G167000--Sobic001G266900 Sobic004G167000--Sobic008G008200 Sobic004G167000--Sobic010G180000 Sobic004G167000--Sobic008G138300 Sobic004G167000--Sobic010G159500 Sobic007G064600 Sobic007G064600 Sobic004G167000--Sobic007G064600 Sobic004G167000--Sobic003G239400 Sobic003G040400 Sobic003G040400 Sobic004G167000--Sobic003G040400 Sobic001G266900--Sobic004G167000 Sobic001G266900--Sobic008G138300 Sobic001G266900--Sobic008G087300 Sobic001G266900--Sobic010G159500 Sobic001G266900--Sobic003G239400 Sobic009G116300 Sobic009G116300 Sobic001G266900--Sobic009G116300 Sobic003G206000 Sobic003G206000 Sobic001G266900--Sobic003G206000 Sobic010G200000 Sobic010G200000 Sobic001G266900--Sobic010G200000 Sobic001G332050 Sobic001G332050 Sobic001G266900--Sobic001G332050 Sobic008G008200--Sobic008G087300 Sobic008G008200--Sobic004G167000 Sobic008G008200--Sobic010G180000 Sobic008G008200--Sobic001G266900 Sobic008G008200--Sobic009G239800 Sobic007G068700 Sobic007G068700 Sobic008G008200--Sobic007G068700 Sobic008G008200--Sobic008G138300 Sobic003G162500 Sobic003G162500 Sobic008G008200--Sobic003G162500 Sobic008G008200--Sobic010G159500 Sobic010G180000--Sobic008G138300 Sobic010G180000--Sobic001G266900 Sobic010G180000--Sobic003G162500 Sobic010G180000--Sobic008G008200 Sobic010G180000--Sobic004G167000 Sobic004G090700 Sobic004G090700 Sobic010G180000--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic010G180000--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic010G180000--Sobic004G159200 Sobic010G180000--Sobic008G087300 Sobic003G413400 Sobic003G413400 Sobic008G138300--Sobic003G413400 Sobic002G129600 Sobic002G129600 Sobic008G138300--Sobic002G129600 Sobic008G138300--Sobic004G159200 Sobic008G138300--Sobic003G206200 Sobic008G138300--Sobic004G090700 Sobic003G206300 Sobic003G206300 Sobic008G138300--Sobic003G206300 Sobic008G138300--Sobic010G159500 Sobic008G138300--Sobic009G116300 Sobic007G073300 Sobic007G073300 Sobic008G138300--Sobic007G073300 Sobic010G159500--Sobic008G138300 Sobic010G159500--Sobic009G116300 Sobic010G159500--Sobic003G206300 Sobic010G159500--Sobic010G200000 Sobic010G159500--Sobic003G206000 Sobic010G159500--Sobic001G332050 Sobic009G239800--Sobic008G008200 Sobic009G239800--Sobic008G087300 Sobic009G239800--Sobic004G167000 Sobic001G303750 Sobic001G303750 Sobic009G239800--Sobic001G303750 Sobic009G239800--Sobic010G180000 Sobic009G239800--Sobic001G266900 Sobic009G239800--Sobic007G068700 Sobic010G108100 Sobic010G108100 Sobic009G239800--Sobic010G108100 Sobic009G239800--Sobic008G138300 Sobic003G239400--Sobic009G116300 Sobic003G239400--Sobic010G200000 Sobic003G239400--Sobic003G206000 Sobic003G239400--Sobic001G332050 Sobic008G126000--Sobic010G180000 Sobic008G126000--Sobic001G266900 Sobic009G069100 Sobic009G069100 Sobic008G126000--Sobic009G069100 Sobic008G126000--Sobic008G138300 Sobic008G126000--Sobic003G040400 Sobic008G126000--Sobic004G167000 Sobic008G126000--Sobic010G159500 Sobic008G126000--Sobic008G087300 Sobic008G126000--Sobic003G239400
Octagon: transcription factors


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