Gene annotation
Transcriptome id Sobic.007G068700.1
Synonym Sb07g005430
Functional annotation polyphenol oxidase, putative, expressed
UniProt A0A1Z5R8F8
Pfam PF12142 PF12143 PF00264
Panther DB PTHR11474 PTHR11474:SF16
NCBI CDD -
KEGG Orthology K00422; polyphenol oxidase
Gene Ontology GO:0004097; catechol oxidase activity GO:0016491oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g58100.1 : polyphenol oxidase, putative, expressed
MaizeGDB (Corn) Zm00025a054799 , Zm00025a029962 , Zm00025a057062
Brachypodium -
Barley -
Wheat TraesCS2B02G491100 , TraesCS2B02G491400 , TraesCS2D02G468200 , TraesCS2A02G468200 , TraesCS2A02G468500 , TraesCS2B02G491000 , TraesCS2D02G468600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G008200 TMS membrane protein/tumour differentially expressed protein, putative, expressed -
2 Sobic.010G180000 - -
3 Sobic.009G239800 DUF538 domain containing protein, putative, expressed -
4 Sobic.002G305400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
5 Sobic.009G087900 transmembrane amino acid transporter protein, putative, expressed -
6 Sobic.004G167000 POEI29 - Pollen Ole e I allergen and extensin family protein precursor, putative, expressed -
7 Sobic.003G206100 THION27 - Plant thionin family protein precursor, expressed -
8 Sobic.008G087300 3-oxoacyl-reductase, chloroplast precursor, putative, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
9 Sobic.001G153800 Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
10 Sobic.002G334400 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
11 Sobic.006G251301 - -
12 Sobic.003G162500 expressed protein -
13 Sobic.009G187700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsGH3.4 - Probable indole-3-acetic acid-amido synthetase, expressed K14487: auxin responsive GH3 gene family
14 Sobic.010G005900 nodulin, putative, expressed -
15 Sobic.008G189800 CHCH domain containing protein, expressed -
16 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.010G195800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Cinnamoyl-CoA reductase family (At)(PubMedID : 27208977)@reductase, putative, expressed -
18 Sobic.001G359100 cytochrome P450, putative, expressed -
19 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
20 Sobic.008G138300 expressed protein -


Gene co-expression network
sample Sobic007G068700 Sobic007G068700 Sobic008G008200 Sobic008G008200 Sobic007G068700--Sobic008G008200 Sobic010G180000 Sobic010G180000 Sobic007G068700--Sobic010G180000 Sobic009G239800 Sobic009G239800 Sobic007G068700--Sobic009G239800 Sobic002G305400 Sobic002G305400 Sobic007G068700--Sobic002G305400 Sobic009G087900 Sobic009G087900 Sobic007G068700--Sobic009G087900 Sobic004G167000 Sobic004G167000 Sobic007G068700--Sobic004G167000 Sobic003G206100 Sobic003G206100 Sobic007G068700--Sobic003G206100 Sobic008G087300 Sobic008G087300 Sobic007G068700--Sobic008G087300 Sobic001G153800 Sobic001G153800 Sobic007G068700--Sobic001G153800 Sobic008G008200--Sobic008G087300 Sobic008G008200--Sobic004G167000 Sobic008G008200--Sobic010G180000 Sobic001G266900 Sobic001G266900 Sobic008G008200--Sobic001G266900 Sobic008G008200--Sobic009G239800 Sobic008G008200--Sobic007G068700 Sobic008G138300 Sobic008G138300 Sobic008G008200--Sobic008G138300 Sobic003G162500 Sobic003G162500 Sobic008G008200--Sobic003G162500 Sobic010G159500 Sobic010G159500 Sobic008G008200--Sobic010G159500 Sobic010G180000--Sobic008G138300 Sobic010G180000--Sobic001G266900 Sobic010G180000--Sobic003G162500 Sobic010G180000--Sobic008G008200 Sobic010G180000--Sobic004G167000 Sobic004G090700 Sobic004G090700 Sobic010G180000--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic010G180000--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic010G180000--Sobic004G159200 Sobic010G180000--Sobic008G087300 Sobic009G239800--Sobic008G008200 Sobic009G239800--Sobic008G087300 Sobic009G239800--Sobic004G167000 Sobic001G303750 Sobic001G303750 Sobic009G239800--Sobic001G303750 Sobic009G239800--Sobic010G180000 Sobic009G239800--Sobic001G266900 Sobic009G239800--Sobic007G068700 Sobic010G108100 Sobic010G108100 Sobic009G239800--Sobic010G108100 Sobic009G239800--Sobic008G138300 Sobic002G305400--Sobic009G087900 Sobic002G334400 Sobic002G334400 Sobic002G305400--Sobic002G334400 Sobic002G305400--Sobic001G153800 Sobic001G359100 Sobic001G359100 Sobic002G305400--Sobic001G359100 Sobic003G070200 Sobic003G070200 Sobic002G305400--Sobic003G070200 Sobic006G059400 Sobic006G059400 Sobic002G305400--Sobic006G059400 Sobic010G005900 Sobic010G005900 Sobic002G305400--Sobic010G005900 Sobic002G305400--Sobic003G206100 Sobic006G251301 Sobic006G251301 Sobic002G305400--Sobic006G251301 Sobic009G087900--Sobic002G305400 Sobic009G087900--Sobic002G334400 Sobic009G087900--Sobic001G153800 Sobic009G087900--Sobic001G359100 Sobic009G087900--Sobic003G070200 Sobic009G087900--Sobic006G059400 Sobic009G087900--Sobic010G005900 Sobic009G087900--Sobic003G206100 Sobic002G260100 Sobic002G260100 Sobic009G087900--Sobic002G260100 Sobic004G167000--Sobic008G087300 Sobic004G167000--Sobic001G266900 Sobic004G167000--Sobic008G008200 Sobic004G167000--Sobic010G180000 Sobic004G167000--Sobic008G138300 Sobic004G167000--Sobic010G159500 Sobic007G064600 Sobic007G064600 Sobic004G167000--Sobic007G064600 Sobic003G239400 Sobic003G239400 Sobic004G167000--Sobic003G239400 Sobic003G040400 Sobic003G040400 Sobic004G167000--Sobic003G040400 Sobic003G206100--Sobic006G251301 Sobic008G189800 Sobic008G189800 Sobic003G206100--Sobic008G189800 Sobic003G206100--Sobic003G162500 Sobic003G206100--Sobic004G090700 Sobic003G206100--Sobic003G206200 Sobic003G206100--Sobic004G159200 Sobic003G413400 Sobic003G413400 Sobic003G206100--Sobic003G413400 Sobic003G206100--Sobic008G138300 Sobic002G129600 Sobic002G129600 Sobic003G206100--Sobic002G129600 Sobic008G087300--Sobic004G167000 Sobic008G087300--Sobic001G266900 Sobic008G087300--Sobic008G008200 Sobic008G087300--Sobic010G180000 Sobic008G087300--Sobic008G138300 Sobic008G087300--Sobic010G159500 Sobic008G087300--Sobic009G239800 Sobic008G087300--Sobic003G239400 Sobic008G126000 Sobic008G126000 Sobic008G087300--Sobic008G126000 Sobic001G153800--Sobic002G334400 Sobic001G153800--Sobic001G359100 Sobic001G153800--Sobic003G070200 Sobic001G153800--Sobic006G059400 Sobic001G153800--Sobic009G087900 Sobic001G153800--Sobic002G305400 Sobic001G153800--Sobic002G260100 Sobic003G062900 Sobic003G062900 Sobic001G153800--Sobic003G062900 Sobic001G153800--Sobic010G005900
Octagon: transcription factors


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