Gene annotation
Transcriptome id Sobic.009G087900.1
Synonym Sb09g008100
Functional annotation transmembrane amino acid transporter protein, putative, expressed
UniProt C5YV91
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF254
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G40780 : lysine histidine transporter 1
RAP-DB (Rice) LOC_Os08g03350.1 : amino acid transporter, putative, expressed
MaizeGDB (Corn) Zm00025a040345 , Zm00025a011107 , Zm00025a044966 , Zm00025a054737 , Zm00025a040338 , Zm00025a040344
Brachypodium PNT71577 , KQJ94928
Barley HORVU1Hr1G011920.2 , HORVU1Hr1G011920.1 , HORVU7Hr1G032060.4 , HORVU7Hr1G032060.5 , HORVU7Hr1G032060.2 , HORVU7Hr1G032060.3 , HORVU7Hr1G032060.1
Wheat TraesCS7B02G060400 , TraesCS7A02G312800 , TraesCS7D02G157000 , TraesCS7A02G313000 , TraesCS7B02G213000 , TraesCS7A02G156600 , TraesCS7D02G309400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G305400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
2 Sobic.002G334400 CSLF3 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
3 Sobic.001G153800 Os10bglu34 - beta-glucosidase homologue, similar to Os3bglu6, expressed K01188: beta-glucosidase
4 Sobic.001G359100 cytochrome P450, putative, expressed -
5 Sobic.003G070200 THION18 - Plant thionin family protein precursor, expressed -
6 Sobic.006G059400 - -
7 Sobic.010G005900 nodulin, putative, expressed -
8 Sobic.003G206100 THION27 - Plant thionin family protein precursor, expressed -
9 Sobic.002G260100 - -
10 Sobic.006G251301 - -
11 Sobic.003G062900 OsSCP1 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
12 Sobic.008G189800 CHCH domain containing protein, expressed -
13 Sobic.003G162500 expressed protein -
14 Sobic.007G068700 polyphenol oxidase, putative, expressed K00422: polyphenol oxidase
15 Sobic.004G090700 - -
16 Sobic.003G206200 THION27 - Plant thionin family protein precursor, expressed -
17 Sobic.010G180000 - -
18 Sobic.004G159200 LEML2 - Anther-specific LEM1 family protein precursor, expressed -
19 Sobic.003G413400 LEML1 - Anther-specific LEM1 family protein precursor, expressed -
20 Sobic.008G138300 expressed protein -


Gene co-expression network
sample Sobic009G087900 Sobic009G087900 Sobic002G305400 Sobic002G305400 Sobic009G087900--Sobic002G305400 Sobic002G334400 Sobic002G334400 Sobic009G087900--Sobic002G334400 Sobic001G153800 Sobic001G153800 Sobic009G087900--Sobic001G153800 Sobic001G359100 Sobic001G359100 Sobic009G087900--Sobic001G359100 Sobic003G070200 Sobic003G070200 Sobic009G087900--Sobic003G070200 Sobic006G059400 Sobic006G059400 Sobic009G087900--Sobic006G059400 Sobic010G005900 Sobic010G005900 Sobic009G087900--Sobic010G005900 Sobic003G206100 Sobic003G206100 Sobic009G087900--Sobic003G206100 Sobic002G260100 Sobic002G260100 Sobic009G087900--Sobic002G260100 Sobic002G305400--Sobic009G087900 Sobic002G305400--Sobic002G334400 Sobic002G305400--Sobic001G153800 Sobic002G305400--Sobic001G359100 Sobic002G305400--Sobic003G070200 Sobic002G305400--Sobic006G059400 Sobic002G305400--Sobic010G005900 Sobic002G305400--Sobic003G206100 Sobic006G251301 Sobic006G251301 Sobic002G305400--Sobic006G251301 Sobic002G334400--Sobic001G153800 Sobic002G334400--Sobic001G359100 Sobic002G334400--Sobic003G070200 Sobic002G334400--Sobic006G059400 Sobic002G334400--Sobic009G087900 Sobic002G334400--Sobic002G305400 Sobic002G334400--Sobic002G260100 Sobic003G062900 Sobic003G062900 Sobic002G334400--Sobic003G062900 Sobic002G334400--Sobic010G005900 Sobic001G153800--Sobic002G334400 Sobic001G153800--Sobic001G359100 Sobic001G153800--Sobic003G070200 Sobic001G153800--Sobic006G059400 Sobic001G153800--Sobic009G087900 Sobic001G153800--Sobic002G305400 Sobic001G153800--Sobic002G260100 Sobic001G153800--Sobic003G062900 Sobic001G153800--Sobic010G005900 Sobic001G359100--Sobic003G070200 Sobic001G359100--Sobic006G059400 Sobic001G359100--Sobic001G153800 Sobic001G359100--Sobic002G334400 Sobic001G359100--Sobic009G087900 Sobic001G359100--Sobic002G305400 Sobic001G359100--Sobic002G260100 Sobic001G359100--Sobic003G062900 Sobic001G359100--Sobic010G005900 Sobic003G070200--Sobic001G359100 Sobic003G070200--Sobic006G059400 Sobic003G070200--Sobic001G153800 Sobic003G070200--Sobic002G334400 Sobic003G070200--Sobic009G087900 Sobic003G070200--Sobic002G305400 Sobic003G070200--Sobic002G260100 Sobic003G070200--Sobic003G062900 Sobic003G070200--Sobic010G005900 Sobic006G059400--Sobic001G359100 Sobic006G059400--Sobic003G070200 Sobic006G059400--Sobic001G153800 Sobic006G059400--Sobic002G334400 Sobic006G059400--Sobic002G260100 Sobic006G059400--Sobic003G062900 Sobic006G059400--Sobic009G087900 Sobic006G059400--Sobic002G305400 Sobic006G059400--Sobic010G005900 Sobic010G005900--Sobic002G305400 Sobic010G005900--Sobic009G087900 Sobic010G005900--Sobic002G334400 Sobic010G005900--Sobic003G206100 Sobic010G005900--Sobic006G251301 Sobic010G005900--Sobic001G153800 Sobic010G005900--Sobic003G070200 Sobic010G005900--Sobic001G359100 Sobic008G189800 Sobic008G189800 Sobic010G005900--Sobic008G189800 Sobic003G206100--Sobic006G251301 Sobic003G206100--Sobic008G189800 Sobic003G162500 Sobic003G162500 Sobic003G206100--Sobic003G162500 Sobic004G090700 Sobic004G090700 Sobic003G206100--Sobic004G090700 Sobic003G206200 Sobic003G206200 Sobic003G206100--Sobic003G206200 Sobic004G159200 Sobic004G159200 Sobic003G206100--Sobic004G159200 Sobic003G413400 Sobic003G413400 Sobic003G206100--Sobic003G413400 Sobic008G138300 Sobic008G138300 Sobic003G206100--Sobic008G138300 Sobic002G129600 Sobic002G129600 Sobic003G206100--Sobic002G129600 Sobic002G260100--Sobic006G059400 Sobic002G260100--Sobic001G359100 Sobic002G260100--Sobic003G070200 Sobic002G260100--Sobic001G153800 Sobic002G260100--Sobic003G062900 Sobic002G260100--Sobic002G334400 Sobic002G260100--Sobic009G087900 Sobic002G260100--Sobic002G305400 Sobic004G089400 Sobic004G089400 Sobic002G260100--Sobic004G089400
Octagon: transcription factors


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