Gene annotation
Transcriptome id Sobic.004G125400.1
Synonym Sb04g010640
Functional annotation isochorismatase family protein, putative, expressed
UniProt A0A194YP76
Pfam PF00857
Panther DB PTHR11080
NCBI CDD KOG4003; Pyrazinamidase/nicotinamidase PNC1
KEGG Orthology -
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT3G16190 : Isochorismatase family protein
RAP-DB (Rice) LOC_Os02g17620.1 : isochorismatase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G125400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G010400 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.001G422300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.006G066500 expressed protein -
4 Sobic.002G332300 expressed protein -
5 Sobic.010G232000 RIC10, putative, expressed -
6 Sobic.001G238600 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.005G011100 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.003G112200 Cupin domain containing protein, expressed -
9 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
10 Sobic.007G175400 carrier, putative, expressed -
11 Sobic.003G236701 - -
12 Sobic.010G152900 beta-D-xylosidase, putative, expressed -
13 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
14 Sobic.008G126000 calmodulin binding protein, putative, expressed -
15 Sobic.010G180000 - -
16 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.009G069100 dolichol phosphate-mannose biosynthesis regulatory protein, putative, expressed K09658: dolichol phosphate-mannose biosynthesis regulatory protein
18 Sobic.001G266900 LTPL37 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.010G108100 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
20 Sobic.007G195500 thiol protease SEN102 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G125400 Sobic004G125400 Sobic008G010400 Sobic008G010400 Sobic004G125400--Sobic008G010400 Sobic001G422300 Sobic001G422300 Sobic004G125400--Sobic001G422300 Sobic006G066500 Sobic006G066500 Sobic004G125400--Sobic006G066500 Sobic002G332300 Sobic002G332300 Sobic004G125400--Sobic002G332300 Sobic010G232000 Sobic010G232000 Sobic004G125400--Sobic010G232000 Sobic001G238600 Sobic001G238600 Sobic004G125400--Sobic001G238600 Sobic005G011100 Sobic005G011100 Sobic004G125400--Sobic005G011100 Sobic003G112200 Sobic003G112200 Sobic004G125400--Sobic003G112200 Sobic006G226200 Sobic006G226200 Sobic004G125400--Sobic006G226200 Sobic008G010400--Sobic001G422300 Sobic008G010400--Sobic004G125400 Sobic008G010400--Sobic005G011100 Sobic008G010400--Sobic001G238600 Sobic010G152900 Sobic010G152900 Sobic008G010400--Sobic010G152900 Sobic008G010400--Sobic006G066500 Sobic007G175400 Sobic007G175400 Sobic008G010400--Sobic007G175400 Sobic008G010400--Sobic002G332300 Sobic008G010400--Sobic010G232000 Sobic001G422300--Sobic008G010400 Sobic001G422300--Sobic010G152900 Sobic001G422300--Sobic007G175400 Sobic001G422300--Sobic005G011100 Sobic001G422300--Sobic006G066500 Sobic001G422300--Sobic004G125400 Sobic001G422300--Sobic001G238600 Sobic009G069100 Sobic009G069100 Sobic001G422300--Sobic009G069100 Sobic004G293800 Sobic004G293800 Sobic001G422300--Sobic004G293800 Sobic003G236701 Sobic003G236701 Sobic006G066500--Sobic003G236701 Sobic006G066500--Sobic001G422300 Sobic006G066500--Sobic006G226200 Sobic006G066500--Sobic003G112200 Sobic006G066500--Sobic004G125400 Sobic006G066500--Sobic001G238600 Sobic003G231500 Sobic003G231500 Sobic006G066500--Sobic003G231500 Sobic003G220000 Sobic003G220000 Sobic006G066500--Sobic003G220000 Sobic006G066500--Sobic008G010400 Sobic008G087300 Sobic008G087300 Sobic002G332300--Sobic008G087300 Sobic004G167000 Sobic004G167000 Sobic002G332300--Sobic004G167000 Sobic002G332300--Sobic001G238600 Sobic010G180000 Sobic010G180000 Sobic002G332300--Sobic010G180000 Sobic002G332300--Sobic007G175400 Sobic008G008200 Sobic008G008200 Sobic002G332300--Sobic008G008200 Sobic008G126000 Sobic008G126000 Sobic002G332300--Sobic008G126000 Sobic001G266900 Sobic001G266900 Sobic002G332300--Sobic001G266900 Sobic009G239800 Sobic009G239800 Sobic002G332300--Sobic009G239800 Sobic010G232000--Sobic009G239800 Sobic010G232000--Sobic002G332300 Sobic010G232000--Sobic001G422300 Sobic010G232000--Sobic001G238600 Sobic010G232000--Sobic008G126000 Sobic010G232000--Sobic007G175400 Sobic010G108100 Sobic010G108100 Sobic010G232000--Sobic010G108100 Sobic010G232000--Sobic004G125400 Sobic010G108600 Sobic010G108600 Sobic010G232000--Sobic010G108600 Sobic001G238600--Sobic003G231500 Sobic001G238600--Sobic001G422300 Sobic001G238600--Sobic002G332300 Sobic001G238600--Sobic007G175400 Sobic001G238600--Sobic003G220000 Sobic001G238600--Sobic006G066500 Sobic001G238600--Sobic010G232000 Sobic001G238600--Sobic008G010400 Sobic001G238600--Sobic005G011100 Sobic005G011100--Sobic010G152900 Sobic005G011100--Sobic008G010400 Sobic005G011100--Sobic001G422300 Sobic005G011100--Sobic007G175400 Sobic001G332050 Sobic001G332050 Sobic005G011100--Sobic001G332050 Sobic003G112200--Sobic006G066500 Sobic003G112200--Sobic003G236701 Sobic003G112200--Sobic006G226200 Sobic002G164600 Sobic002G164600 Sobic003G112200--Sobic002G164600 Sobic003G112200--Sobic001G422300 Sobic003G112200--Sobic003G231500 Sobic009G241600 Sobic009G241600 Sobic003G112200--Sobic009G241600 Sobic003G112200--Sobic004G125400 Sobic003G112200--Sobic003G220000 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic007G223600 Sobic007G223600 Sobic006G226200--Sobic007G223600 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic003G296400 Sobic003G296400 Sobic006G226200--Sobic003G296400 Sobic009G048000 Sobic009G048000 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic002G205500 Sobic002G205500 Sobic006G226200--Sobic002G205500
Octagon: transcription factors


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