Gene annotation
Transcriptome id Sobic.003G112200.1
Synonym GLP5, Sb03g009430
Functional annotation Cupin domain containing protein, expressed
UniProt A0A1B6Q2N0
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G09560 : germin-like protein 5
RAP-DB (Rice) LOC_Os01g14670.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035173 , Zm00025a024209 , Zm00025a045177 , Zm00025a019053
Brachypodium KQK03596 , KQK03989 , PNT62629
Barley HORVU3Hr1G107870.1 , HORVU3Hr1G034100.8 , HORVU3Hr1G034100.7 , HORVU3Hr1G034100.6 , HORVU3Hr1G034100.5 , HORVU3Hr1G034100.4 , HORVU3Hr1G034100.3 , HORVU3Hr1G034100.2 , HORVU3Hr1G034100.1
Wheat TraesCS3D02G176100 , TraesCS3D02G489700 , TraesCS3B02G543700 , TraesCS7D02G477200 , TraesCS3B02G200200 , TraesCS3A02G040900 , TraesCS3B02G544200 , TraesCS3D02G490500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G066500 expressed protein -
2 Sobic.003G236701 - -
3 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
4 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
5 Sobic.001G422300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
6 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
8 Sobic.004G125400 isochorismatase family protein, putative, expressed -
9 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
10 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
11 Sobic.001G238600 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
13 Sobic.008G059800 expressed protein -
14 Sobic.009G048000 villin, putative, expressed K08017: advillin
15 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
16 Sobic.006G209300 transferase family domain containing protein, expressed -
17 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
18 Sobic.008G010400 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
20 Sobic.002G332300 expressed protein -


Gene co-expression network
sample Sobic003G112200 Sobic003G112200 Sobic006G066500 Sobic006G066500 Sobic003G112200--Sobic006G066500 Sobic003G236701 Sobic003G236701 Sobic003G112200--Sobic003G236701 Sobic006G226200 Sobic006G226200 Sobic003G112200--Sobic006G226200 Sobic002G164600 Sobic002G164600 Sobic003G112200--Sobic002G164600 Sobic001G422300 Sobic001G422300 Sobic003G112200--Sobic001G422300 Sobic003G231500 Sobic003G231500 Sobic003G112200--Sobic003G231500 Sobic009G241600 Sobic009G241600 Sobic003G112200--Sobic009G241600 Sobic004G125400 Sobic004G125400 Sobic003G112200--Sobic004G125400 Sobic003G220000 Sobic003G220000 Sobic003G112200--Sobic003G220000 Sobic006G066500--Sobic003G236701 Sobic006G066500--Sobic001G422300 Sobic006G066500--Sobic006G226200 Sobic006G066500--Sobic003G112200 Sobic006G066500--Sobic004G125400 Sobic001G238600 Sobic001G238600 Sobic006G066500--Sobic001G238600 Sobic006G066500--Sobic003G231500 Sobic006G066500--Sobic003G220000 Sobic008G010400 Sobic008G010400 Sobic006G066500--Sobic008G010400 Sobic003G236701--Sobic006G066500 Sobic003G236701--Sobic002G164600 Sobic003G236701--Sobic009G241600 Sobic003G236701--Sobic006G226200 Sobic003G236701--Sobic003G112200 Sobic007G223600 Sobic007G223600 Sobic003G236701--Sobic007G223600 Sobic008G059800 Sobic008G059800 Sobic003G236701--Sobic008G059800 Sobic003G236701--Sobic003G231500 Sobic003G236701--Sobic001G238600 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic003G296400 Sobic003G296400 Sobic006G226200--Sobic003G296400 Sobic009G048000 Sobic009G048000 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic002G205500 Sobic002G205500 Sobic006G226200--Sobic002G205500 Sobic002G164600--Sobic003G236701 Sobic002G164600--Sobic007G223600 Sobic002G164600--Sobic008G059800 Sobic002G164600--Sobic006G226200 Sobic002G164600--Sobic003G112200 Sobic002G164600--Sobic006G066500 Sobic006G209300 Sobic006G209300 Sobic002G164600--Sobic006G209300 Sobic002G164600--Sobic009G241600 Sobic005G229100 Sobic005G229100 Sobic002G164600--Sobic005G229100 Sobic001G422300--Sobic008G010400 Sobic010G152900 Sobic010G152900 Sobic001G422300--Sobic010G152900 Sobic007G175400 Sobic007G175400 Sobic001G422300--Sobic007G175400 Sobic005G011100 Sobic005G011100 Sobic001G422300--Sobic005G011100 Sobic001G422300--Sobic006G066500 Sobic001G422300--Sobic004G125400 Sobic001G422300--Sobic001G238600 Sobic009G069100 Sobic009G069100 Sobic001G422300--Sobic009G069100 Sobic004G293800 Sobic004G293800 Sobic001G422300--Sobic004G293800 Sobic003G231500--Sobic001G238600 Sobic003G231500--Sobic003G236701 Sobic003G231500--Sobic006G066500 Sobic003G231500--Sobic001G422300 Sobic003G231500--Sobic006G226200 Sobic003G231500--Sobic003G220000 Sobic003G231500--Sobic006G209300 Sobic003G231500--Sobic007G175400 Sobic008G126000 Sobic008G126000 Sobic003G231500--Sobic008G126000 Sobic009G241600--Sobic003G236701 Sobic007G027200 Sobic007G027200 Sobic009G241600--Sobic007G027200 Sobic009G241600--Sobic006G066500 Sobic009G241600--Sobic008G059800 Sobic009G241600--Sobic002G164600 Sobic010G199700 Sobic010G199700 Sobic009G241600--Sobic010G199700 Sobic008G112200 Sobic008G112200 Sobic009G241600--Sobic008G112200 Sobic009G241600--Sobic003G112200 Sobic006G166800 Sobic006G166800 Sobic009G241600--Sobic006G166800 Sobic004G125400--Sobic008G010400 Sobic004G125400--Sobic001G422300 Sobic004G125400--Sobic006G066500 Sobic002G332300 Sobic002G332300 Sobic004G125400--Sobic002G332300 Sobic010G232000 Sobic010G232000 Sobic004G125400--Sobic010G232000 Sobic004G125400--Sobic001G238600 Sobic004G125400--Sobic005G011100 Sobic004G125400--Sobic003G112200 Sobic004G125400--Sobic006G226200 Sobic003G220000--Sobic001G238600 Sobic003G220000--Sobic006G066500 Sobic003G220000--Sobic003G231500 Sobic003G220000--Sobic001G422300 Sobic003G220000--Sobic008G010400 Sobic003G220000--Sobic003G112200 Sobic003G220000--Sobic006G226200 Sobic003G220000--Sobic003G236701 Sobic003G220000--Sobic007G175400
Octagon: transcription factors


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