Gene annotation
Transcriptome id Sobic.006G209300.1
Synonym Sb06g028020
Functional annotation transferase family domain containing protein, expressed
UniProt C5YFL5
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT1G32910 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os04g51990.1 : transferase family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009852 , Zm00025a056986
Brachypodium KQJ84480 , KQJ84481 , KQJ84479
Barley HORVU2Hr1G100230.8 , HORVU2Hr1G100230.1 , HORVU2Hr1G100230.2 , HORVU2Hr1G100230.3 , HORVU2Hr1G100230.4 , HORVU2Hr1G100230.5 , HORVU2Hr1G100230.6 , HORVU2Hr1G100230.7 , HORVU2Hr1G100210.2 , HORVU2Hr1G100210.3 , HORVU2Hr1G100210.1 , HORVU2Hr1G100150.5 , HORVU2Hr1G100150.4 , HORVU2Hr1G100150.6 , HORVU2Hr1G100150.1 , HORVU2Hr1G100150.3 , HORVU2Hr1G100150.2 , HORVU2Hr1G100110.3 , HORVU2Hr1G100110.2 , HORVU2Hr1G100110.5 , HORVU2Hr1G100110.4 , HORVU2Hr1G100110.6 , HORVU2Hr1G100110.9 , HORVU2Hr1G100110.8
Wheat TraesCS2D02G427000 , TraesCS2B02G449600 , TraesCS2B02G449500 , TraesCS2A02G429000 , TraesCS2A02G429200 , TraesCS2B02G449700 , TraesCS2D02G426800
Populus -


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cDNA sequences
Sobic.006G209300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
2 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
3 Sobic.003G236701 - -
4 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
5 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
7 Sobic.006G066500 expressed protein -
8 Sobic.003G112200 Cupin domain containing protein, expressed -
9 Sobic.008G059800 expressed protein -
10 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
11 Sobic.001G238600 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
13 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
14 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
15 Sobic.008G126000 calmodulin binding protein, putative, expressed -
16 Sobic.001G362100 nodulation protein-related, putative, expressed -
17 Sobic.003G251800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
18 Sobic.001G422300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
19 Sobic.009G048000 villin, putative, expressed K08017: advillin
20 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -


Gene co-expression network
sample Sobic006G209300 Sobic006G209300 Sobic003G231500 Sobic003G231500 Sobic006G209300--Sobic003G231500 Sobic002G164600 Sobic002G164600 Sobic006G209300--Sobic002G164600 Sobic003G236701 Sobic003G236701 Sobic006G209300--Sobic003G236701 Sobic006G226200 Sobic006G226200 Sobic006G209300--Sobic006G226200 Sobic010G232500 Sobic010G232500 Sobic006G209300--Sobic010G232500 Sobic007G223600 Sobic007G223600 Sobic006G209300--Sobic007G223600 Sobic006G066500 Sobic006G066500 Sobic006G209300--Sobic006G066500 Sobic003G112200 Sobic003G112200 Sobic006G209300--Sobic003G112200 Sobic008G059800 Sobic008G059800 Sobic006G209300--Sobic008G059800 Sobic001G238600 Sobic001G238600 Sobic003G231500--Sobic001G238600 Sobic003G231500--Sobic003G236701 Sobic003G231500--Sobic006G066500 Sobic001G422300 Sobic001G422300 Sobic003G231500--Sobic001G422300 Sobic003G231500--Sobic006G226200 Sobic003G220000 Sobic003G220000 Sobic003G231500--Sobic003G220000 Sobic003G231500--Sobic006G209300 Sobic007G175400 Sobic007G175400 Sobic003G231500--Sobic007G175400 Sobic008G126000 Sobic008G126000 Sobic003G231500--Sobic008G126000 Sobic002G164600--Sobic003G236701 Sobic002G164600--Sobic007G223600 Sobic002G164600--Sobic008G059800 Sobic002G164600--Sobic006G226200 Sobic002G164600--Sobic003G112200 Sobic002G164600--Sobic006G066500 Sobic002G164600--Sobic006G209300 Sobic009G241600 Sobic009G241600 Sobic002G164600--Sobic009G241600 Sobic005G229100 Sobic005G229100 Sobic002G164600--Sobic005G229100 Sobic003G236701--Sobic006G066500 Sobic003G236701--Sobic002G164600 Sobic003G236701--Sobic009G241600 Sobic003G236701--Sobic006G226200 Sobic003G236701--Sobic003G112200 Sobic003G236701--Sobic007G223600 Sobic003G236701--Sobic008G059800 Sobic003G236701--Sobic003G231500 Sobic003G236701--Sobic001G238600 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic003G296400 Sobic003G296400 Sobic006G226200--Sobic003G296400 Sobic009G048000 Sobic009G048000 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic002G205500 Sobic002G205500 Sobic006G226200--Sobic002G205500 Sobic006G144600 Sobic006G144600 Sobic010G232500--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic010G232500--Sobic001G406700 Sobic010G232500--Sobic005G229100 Sobic003G387500 Sobic003G387500 Sobic010G232500--Sobic003G387500 Sobic010G232500--Sobic006G226200 Sobic002G167600 Sobic002G167600 Sobic010G232500--Sobic002G167600 Sobic001G399200 Sobic001G399200 Sobic010G232500--Sobic001G399200 Sobic010G232500--Sobic003G231500 Sobic010G232500--Sobic007G223600 Sobic007G223600--Sobic002G164600 Sobic007G223600--Sobic002G205500 Sobic007G223600--Sobic006G226200 Sobic007G223600--Sobic003G236701 Sobic007G223600--Sobic003G296400 Sobic007G223600--Sobic005G229100 Sobic007G223600--Sobic006G066500 Sobic001G224300 Sobic001G224300 Sobic007G223600--Sobic001G224300 Sobic007G223600--Sobic008G059800 Sobic006G066500--Sobic003G236701 Sobic006G066500--Sobic001G422300 Sobic006G066500--Sobic006G226200 Sobic006G066500--Sobic003G112200 Sobic004G125400 Sobic004G125400 Sobic006G066500--Sobic004G125400 Sobic006G066500--Sobic001G238600 Sobic006G066500--Sobic003G231500 Sobic006G066500--Sobic003G220000 Sobic008G010400 Sobic008G010400 Sobic006G066500--Sobic008G010400 Sobic003G112200--Sobic006G066500 Sobic003G112200--Sobic003G236701 Sobic003G112200--Sobic006G226200 Sobic003G112200--Sobic002G164600 Sobic003G112200--Sobic001G422300 Sobic003G112200--Sobic003G231500 Sobic003G112200--Sobic009G241600 Sobic003G112200--Sobic004G125400 Sobic003G112200--Sobic003G220000 Sobic008G059800--Sobic002G164600 Sobic008G059800--Sobic003G236701 Sobic008G059800--Sobic009G241600 Sobic009G153800 Sobic009G153800 Sobic008G059800--Sobic009G153800 Sobic010G199700 Sobic010G199700 Sobic008G059800--Sobic010G199700 Sobic008G059800--Sobic007G223600 Sobic008G112200 Sobic008G112200 Sobic008G059800--Sobic008G112200 Sobic009G226900 Sobic009G226900 Sobic008G059800--Sobic009G226900 Sobic008G059800--Sobic006G066500
Octagon: transcription factors


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