Gene annotation
Transcriptome id Sobic.005G229100.1
Synonym TBL27, Sb05g027710
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
leaf senescence related protein, putative, expressed
UniProt C5Y8L0
Pfam PF14416 PF13839
Panther DB PTHR32285 PTHR32285:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G70230 : TRICHOME BIREFRINGENCE-LIKE 27
RAP-DB (Rice) LOC_Os06g12870.1 : leaf senescence related protein, putative, expressed
MaizeGDB (Corn) Zm00025a029086
Brachypodium -
Barley HORVU7Hr1G039420.7 , HORVU7Hr1G039420.6 , HORVU7Hr1G039420.5 , HORVU7Hr1G039420.4 , HORVU7Hr1G039420.3 , HORVU7Hr1G039420.2 , HORVU7Hr1G039420.1 , HORVU7Hr1G039420.8
Wheat TraesCS7D02G193600 , TraesCS7A02G192500 , TraesCS4B02G183100 , TraesCS7B02G097600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
2 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
4 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
5 Sobic.001G406700 expressed protein -
6 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
7 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
8 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
9 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
10 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
11 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
12 Sobic.003G236701 - -
13 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
14 Sobic.008G137000 RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
15 Sobic.006G209300 transferase family domain containing protein, expressed -
16 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.009G048000 villin, putative, expressed K08017: advillin
18 Sobic.006G066500 expressed protein -
19 Sobic.008G059800 expressed protein -
20 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -


Gene co-expression network
sample Sobic005G229100 Sobic005G229100 Sobic007G223600 Sobic007G223600 Sobic005G229100--Sobic007G223600 Sobic010G232500 Sobic010G232500 Sobic005G229100--Sobic010G232500 Sobic002G205500 Sobic002G205500 Sobic005G229100--Sobic002G205500 Sobic006G144600 Sobic006G144600 Sobic005G229100--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic005G229100--Sobic001G406700 Sobic002G164600 Sobic002G164600 Sobic005G229100--Sobic002G164600 Sobic006G226200 Sobic006G226200 Sobic005G229100--Sobic006G226200 Sobic003G387500 Sobic003G387500 Sobic005G229100--Sobic003G387500 Sobic001G399200 Sobic001G399200 Sobic005G229100--Sobic001G399200 Sobic007G223600--Sobic002G164600 Sobic007G223600--Sobic002G205500 Sobic007G223600--Sobic006G226200 Sobic003G236701 Sobic003G236701 Sobic007G223600--Sobic003G236701 Sobic003G296400 Sobic003G296400 Sobic007G223600--Sobic003G296400 Sobic007G223600--Sobic005G229100 Sobic006G066500 Sobic006G066500 Sobic007G223600--Sobic006G066500 Sobic001G224300 Sobic001G224300 Sobic007G223600--Sobic001G224300 Sobic008G059800 Sobic008G059800 Sobic007G223600--Sobic008G059800 Sobic010G232500--Sobic006G144600 Sobic010G232500--Sobic001G406700 Sobic010G232500--Sobic005G229100 Sobic010G232500--Sobic003G387500 Sobic010G232500--Sobic006G226200 Sobic002G167600 Sobic002G167600 Sobic010G232500--Sobic002G167600 Sobic010G232500--Sobic001G399200 Sobic003G231500 Sobic003G231500 Sobic010G232500--Sobic003G231500 Sobic010G232500--Sobic007G223600 Sobic002G205500--Sobic003G296400 Sobic002G205500--Sobic001G224300 Sobic002G205500--Sobic007G223600 Sobic002G205500--Sobic006G226200 Sobic002G205500--Sobic005G229100 Sobic002G205500--Sobic003G387500 Sobic009G048000 Sobic009G048000 Sobic002G205500--Sobic009G048000 Sobic006G036400 Sobic006G036400 Sobic002G205500--Sobic006G036400 Sobic009G226900 Sobic009G226900 Sobic002G205500--Sobic009G226900 Sobic006G144600--Sobic001G406700 Sobic006G144600--Sobic010G232500 Sobic006G144600--Sobic003G387500 Sobic006G144600--Sobic002G167600 Sobic009G170500 Sobic009G170500 Sobic006G144600--Sobic009G170500 Sobic006G144600--Sobic001G399200 Sobic006G144600--Sobic005G229100 Sobic007G119500 Sobic007G119500 Sobic006G144600--Sobic007G119500 Sobic006G144600--Sobic007G223600 Sobic001G406700--Sobic003G387500 Sobic001G406700--Sobic006G144600 Sobic001G406700--Sobic001G399200 Sobic001G406700--Sobic009G170500 Sobic001G406700--Sobic010G232500 Sobic001G406700--Sobic002G167600 Sobic001G406700--Sobic005G229100 Sobic001G406700--Sobic007G119500 Sobic009G246700 Sobic009G246700 Sobic001G406700--Sobic009G246700 Sobic002G164600--Sobic003G236701 Sobic002G164600--Sobic007G223600 Sobic002G164600--Sobic008G059800 Sobic002G164600--Sobic006G226200 Sobic003G112200 Sobic003G112200 Sobic002G164600--Sobic003G112200 Sobic002G164600--Sobic006G066500 Sobic006G209300 Sobic006G209300 Sobic002G164600--Sobic006G209300 Sobic009G241600 Sobic009G241600 Sobic002G164600--Sobic009G241600 Sobic002G164600--Sobic005G229100 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic006G226200--Sobic003G296400 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic006G226200--Sobic002G205500 Sobic003G387500--Sobic001G406700 Sobic003G387500--Sobic006G144600 Sobic003G387500--Sobic001G224300 Sobic003G387500--Sobic010G232500 Sobic003G387500--Sobic002G167600 Sobic003G387500--Sobic009G170500 Sobic009G162700 Sobic009G162700 Sobic003G387500--Sobic009G162700 Sobic003G387500--Sobic002G205500 Sobic003G387500--Sobic009G226900 Sobic001G399200--Sobic001G406700 Sobic001G399200--Sobic006G144600 Sobic001G399200--Sobic010G232500 Sobic001G399200--Sobic003G387500 Sobic001G399200--Sobic005G229100 Sobic001G362100 Sobic001G362100 Sobic001G399200--Sobic001G362100 Sobic001G399200--Sobic007G223600 Sobic001G399200--Sobic006G226200 Sobic001G399200--Sobic009G170500
Octagon: transcription factors


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