Gene annotation
Transcriptome id Sobic.002G164600.1
Synonym Sb02g020830
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
microtubule-associated protein, putative, expressed
UniProt C5X918
Pfam PF06886
Panther DB PTHR14326 PTHR14326:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005874; microtubule GO:0005819spindle


Orthologs (automatic annotation)
TAIR AT5G37478 : TPX2 (targeting protein for Xklp2) protein family
RAP-DB (Rice) LOC_Os09g13650.1 : microtubule-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a013705
Brachypodium KQJ89789 , KQJ89790
Barley HORVU5Hr1G054820.10 , HORVU5Hr1G054820.2 , HORVU5Hr1G054820.1 , HORVU5Hr1G054820.5 , HORVU5Hr1G054820.6 , HORVU5Hr1G054820.7 , HORVU5Hr1G054820.8 , HORVU5Hr1G054820.9 , HORVU5Hr1G054820.3
Wheat TraesCS5A02G179700 , TraesCS5A02G179700 , TraesCS5A02G179700 , TraesCS5A02G179700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G236701 - -
2 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
3 Sobic.008G059800 expressed protein -
4 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
5 Sobic.003G112200 Cupin domain containing protein, expressed -
6 Sobic.006G066500 expressed protein -
7 Sobic.006G209300 transferase family domain containing protein, expressed -
8 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
9 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
10 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
11 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
12 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
13 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
15 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
16 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
17 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
18 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
19 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.001G406700 expressed protein -


Gene co-expression network
sample Sobic002G164600 Sobic002G164600 Sobic003G236701 Sobic003G236701 Sobic002G164600--Sobic003G236701 Sobic007G223600 Sobic007G223600 Sobic002G164600--Sobic007G223600 Sobic008G059800 Sobic008G059800 Sobic002G164600--Sobic008G059800 Sobic006G226200 Sobic006G226200 Sobic002G164600--Sobic006G226200 Sobic003G112200 Sobic003G112200 Sobic002G164600--Sobic003G112200 Sobic006G066500 Sobic006G066500 Sobic002G164600--Sobic006G066500 Sobic006G209300 Sobic006G209300 Sobic002G164600--Sobic006G209300 Sobic009G241600 Sobic009G241600 Sobic002G164600--Sobic009G241600 Sobic005G229100 Sobic005G229100 Sobic002G164600--Sobic005G229100 Sobic003G236701--Sobic006G066500 Sobic003G236701--Sobic002G164600 Sobic003G236701--Sobic009G241600 Sobic003G236701--Sobic006G226200 Sobic003G236701--Sobic003G112200 Sobic003G236701--Sobic007G223600 Sobic003G236701--Sobic008G059800 Sobic003G231500 Sobic003G231500 Sobic003G236701--Sobic003G231500 Sobic001G238600 Sobic001G238600 Sobic003G236701--Sobic001G238600 Sobic007G223600--Sobic002G164600 Sobic002G205500 Sobic002G205500 Sobic007G223600--Sobic002G205500 Sobic007G223600--Sobic006G226200 Sobic007G223600--Sobic003G236701 Sobic003G296400 Sobic003G296400 Sobic007G223600--Sobic003G296400 Sobic007G223600--Sobic005G229100 Sobic007G223600--Sobic006G066500 Sobic001G224300 Sobic001G224300 Sobic007G223600--Sobic001G224300 Sobic007G223600--Sobic008G059800 Sobic008G059800--Sobic002G164600 Sobic008G059800--Sobic003G236701 Sobic008G059800--Sobic009G241600 Sobic009G153800 Sobic009G153800 Sobic008G059800--Sobic009G153800 Sobic010G199700 Sobic010G199700 Sobic008G059800--Sobic010G199700 Sobic008G059800--Sobic007G223600 Sobic008G112200 Sobic008G112200 Sobic008G059800--Sobic008G112200 Sobic009G226900 Sobic009G226900 Sobic008G059800--Sobic009G226900 Sobic008G059800--Sobic006G066500 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic006G226200--Sobic003G296400 Sobic009G048000 Sobic009G048000 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic006G226200--Sobic002G205500 Sobic003G112200--Sobic006G066500 Sobic003G112200--Sobic003G236701 Sobic003G112200--Sobic006G226200 Sobic003G112200--Sobic002G164600 Sobic001G422300 Sobic001G422300 Sobic003G112200--Sobic001G422300 Sobic003G112200--Sobic003G231500 Sobic003G112200--Sobic009G241600 Sobic004G125400 Sobic004G125400 Sobic003G112200--Sobic004G125400 Sobic003G220000 Sobic003G220000 Sobic003G112200--Sobic003G220000 Sobic006G066500--Sobic003G236701 Sobic006G066500--Sobic001G422300 Sobic006G066500--Sobic006G226200 Sobic006G066500--Sobic003G112200 Sobic006G066500--Sobic004G125400 Sobic006G066500--Sobic001G238600 Sobic006G066500--Sobic003G231500 Sobic006G066500--Sobic003G220000 Sobic008G010400 Sobic008G010400 Sobic006G066500--Sobic008G010400 Sobic006G209300--Sobic003G231500 Sobic006G209300--Sobic002G164600 Sobic006G209300--Sobic003G236701 Sobic006G209300--Sobic006G226200 Sobic010G232500 Sobic010G232500 Sobic006G209300--Sobic010G232500 Sobic006G209300--Sobic007G223600 Sobic006G209300--Sobic006G066500 Sobic006G209300--Sobic003G112200 Sobic006G209300--Sobic008G059800 Sobic009G241600--Sobic003G236701 Sobic007G027200 Sobic007G027200 Sobic009G241600--Sobic007G027200 Sobic009G241600--Sobic006G066500 Sobic009G241600--Sobic008G059800 Sobic009G241600--Sobic002G164600 Sobic009G241600--Sobic010G199700 Sobic009G241600--Sobic008G112200 Sobic009G241600--Sobic003G112200 Sobic006G166800 Sobic006G166800 Sobic009G241600--Sobic006G166800 Sobic005G229100--Sobic007G223600 Sobic005G229100--Sobic010G232500 Sobic005G229100--Sobic002G205500 Sobic006G144600 Sobic006G144600 Sobic005G229100--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic005G229100--Sobic001G406700 Sobic005G229100--Sobic002G164600 Sobic005G229100--Sobic006G226200 Sobic003G387500 Sobic003G387500 Sobic005G229100--Sobic003G387500 Sobic001G399200 Sobic001G399200 Sobic005G229100--Sobic001G399200
Octagon: transcription factors


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