Gene annotation
Transcriptome id Sobic.006G066500.1
Synonym Sb06g015330
Functional annotation expressed protein
UniProt C5YFS2
Pfam PF04949
Panther DB PTHR21470
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G52920 : Family of unknown function (DUF662)
RAP-DB (Rice) LOC_Os04g33450.2 : expressed protein
MaizeGDB (Corn) Zm00025a055988 , Zm00025a020525
Brachypodium KQJ82471
Barley HORVU2Hr1G072420.14 , HORVU2Hr1G072420.13 , HORVU2Hr1G072420.12 , HORVU2Hr1G072420.11 , HORVU2Hr1G072420.10
Wheat TraesCS2B02G309000 , TraesCS2A02G292600 , TraesCS2D02G290400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G236701 - -
2 Sobic.001G422300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@laccase precursor protein, putative, expressed K05909: laccase
3 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
4 Sobic.003G112200 Cupin domain containing protein, expressed -
5 Sobic.004G125400 isochorismatase family protein, putative, expressed -
6 Sobic.001G238600 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
8 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
9 Sobic.008G010400 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
11 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
12 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
13 Sobic.010G232000 RIC10, putative, expressed -
14 Sobic.002G332300 expressed protein -
15 Sobic.007G175400 carrier, putative, expressed -
16 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
17 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
18 Sobic.008G059800 expressed protein -
19 Sobic.006G209300 transferase family domain containing protein, expressed -
20 Sobic.008G126000 calmodulin binding protein, putative, expressed -


Gene co-expression network
sample Sobic006G066500 Sobic006G066500 Sobic003G236701 Sobic003G236701 Sobic006G066500--Sobic003G236701 Sobic001G422300 Sobic001G422300 Sobic006G066500--Sobic001G422300 Sobic006G226200 Sobic006G226200 Sobic006G066500--Sobic006G226200 Sobic003G112200 Sobic003G112200 Sobic006G066500--Sobic003G112200 Sobic004G125400 Sobic004G125400 Sobic006G066500--Sobic004G125400 Sobic001G238600 Sobic001G238600 Sobic006G066500--Sobic001G238600 Sobic003G231500 Sobic003G231500 Sobic006G066500--Sobic003G231500 Sobic003G220000 Sobic003G220000 Sobic006G066500--Sobic003G220000 Sobic008G010400 Sobic008G010400 Sobic006G066500--Sobic008G010400 Sobic003G236701--Sobic006G066500 Sobic002G164600 Sobic002G164600 Sobic003G236701--Sobic002G164600 Sobic009G241600 Sobic009G241600 Sobic003G236701--Sobic009G241600 Sobic003G236701--Sobic006G226200 Sobic003G236701--Sobic003G112200 Sobic007G223600 Sobic007G223600 Sobic003G236701--Sobic007G223600 Sobic008G059800 Sobic008G059800 Sobic003G236701--Sobic008G059800 Sobic003G236701--Sobic003G231500 Sobic003G236701--Sobic001G238600 Sobic001G422300--Sobic008G010400 Sobic010G152900 Sobic010G152900 Sobic001G422300--Sobic010G152900 Sobic007G175400 Sobic007G175400 Sobic001G422300--Sobic007G175400 Sobic005G011100 Sobic005G011100 Sobic001G422300--Sobic005G011100 Sobic001G422300--Sobic006G066500 Sobic001G422300--Sobic004G125400 Sobic001G422300--Sobic001G238600 Sobic009G069100 Sobic009G069100 Sobic001G422300--Sobic009G069100 Sobic004G293800 Sobic004G293800 Sobic001G422300--Sobic004G293800 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic003G296400 Sobic003G296400 Sobic006G226200--Sobic003G296400 Sobic009G048000 Sobic009G048000 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic002G205500 Sobic002G205500 Sobic006G226200--Sobic002G205500 Sobic003G112200--Sobic006G066500 Sobic003G112200--Sobic003G236701 Sobic003G112200--Sobic006G226200 Sobic003G112200--Sobic002G164600 Sobic003G112200--Sobic001G422300 Sobic003G112200--Sobic003G231500 Sobic003G112200--Sobic009G241600 Sobic003G112200--Sobic004G125400 Sobic003G112200--Sobic003G220000 Sobic004G125400--Sobic008G010400 Sobic004G125400--Sobic001G422300 Sobic004G125400--Sobic006G066500 Sobic002G332300 Sobic002G332300 Sobic004G125400--Sobic002G332300 Sobic010G232000 Sobic010G232000 Sobic004G125400--Sobic010G232000 Sobic004G125400--Sobic001G238600 Sobic004G125400--Sobic005G011100 Sobic004G125400--Sobic003G112200 Sobic004G125400--Sobic006G226200 Sobic001G238600--Sobic003G231500 Sobic001G238600--Sobic001G422300 Sobic001G238600--Sobic002G332300 Sobic001G238600--Sobic007G175400 Sobic001G238600--Sobic003G220000 Sobic001G238600--Sobic006G066500 Sobic001G238600--Sobic010G232000 Sobic001G238600--Sobic008G010400 Sobic001G238600--Sobic005G011100 Sobic003G231500--Sobic001G238600 Sobic003G231500--Sobic003G236701 Sobic003G231500--Sobic006G066500 Sobic003G231500--Sobic001G422300 Sobic003G231500--Sobic006G226200 Sobic003G231500--Sobic003G220000 Sobic006G209300 Sobic006G209300 Sobic003G231500--Sobic006G209300 Sobic003G231500--Sobic007G175400 Sobic008G126000 Sobic008G126000 Sobic003G231500--Sobic008G126000 Sobic003G220000--Sobic001G238600 Sobic003G220000--Sobic006G066500 Sobic003G220000--Sobic003G231500 Sobic003G220000--Sobic001G422300 Sobic003G220000--Sobic008G010400 Sobic003G220000--Sobic003G112200 Sobic003G220000--Sobic006G226200 Sobic003G220000--Sobic003G236701 Sobic003G220000--Sobic007G175400 Sobic008G010400--Sobic001G422300 Sobic008G010400--Sobic004G125400 Sobic008G010400--Sobic005G011100 Sobic008G010400--Sobic001G238600 Sobic008G010400--Sobic010G152900 Sobic008G010400--Sobic006G066500 Sobic008G010400--Sobic007G175400 Sobic008G010400--Sobic002G332300 Sobic008G010400--Sobic010G232000
Octagon: transcription factors


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