Gene annotation
Transcriptome id Sobic.001G362100.1
Synonym Sb01g034575
Functional annotation nodulation protein-related, putative, expressed
UniProt C5WYR6
Pfam PF00685
Panther DB PTHR32175 PTHR32175:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008146; sulfotransferase activity


Orthologs (automatic annotation)
TAIR AT2G15730 : P-loop containing nucleoside triphosphate hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g24910.1 : nodulation protein-related, putative, expressed
MaizeGDB (Corn) Zm00025a052321
Brachypodium -
Barley HORVU1Hr1G061930.29 , HORVU1Hr1G061930.28 , HORVU1Hr1G061930.21 , HORVU1Hr1G061930.20 , HORVU1Hr1G061930.23 , HORVU1Hr1G061930.22 , HORVU1Hr1G061930.25 , HORVU1Hr1G061930.24 , HORVU1Hr1G061930.27 , HORVU1Hr1G061930.26 , HORVU1Hr1G061930.8 , HORVU1Hr1G061930.9 , HORVU1Hr1G061930.6 , HORVU1Hr1G061930.18 , HORVU1Hr1G061930.4 , HORVU1Hr1G061930.5 , HORVU1Hr1G061930.2 , HORVU1Hr1G061930.3 , HORVU1Hr1G061930.19 , HORVU1Hr1G061930.14 , HORVU1Hr1G061930.15 , HORVU1Hr1G061930.16 , HORVU1Hr1G061930.17 , HORVU1Hr1G061930.10 , HORVU1Hr1G061930.11 , HORVU1Hr1G061930.12 , HORVU1Hr1G061930.13 , HORVU1Hr1G061930.36 , HORVU1Hr1G061930.34 , HORVU1Hr1G061930.35 , HORVU1Hr1G061930.32 , HORVU1Hr1G061930.33 , HORVU1Hr1G061930.30 , HORVU1Hr1G061930.31 , HORVU1Hr1G061930.7
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
2 Sobic.001G406700 expressed protein -
3 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
5 Sobic.009G048000 villin, putative, expressed K08017: advillin
6 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
7 Sobic.006G209300 transferase family domain containing protein, expressed -
8 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
9 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
10 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G236701 - -
12 Sobic.009G162700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exostosin family domain containing protein, expressed -
13 Sobic.003G220000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ABC-2 type transporter domain containing protein, expressed -
14 Sobic.006G083700 expressed protein -
15 Sobic.001G336700 "Involved in secondary cell wall formation. Reduced mechanical strength in culms and leaves, thinner cell walls, reduced cellulose content, increased lignin content, in the mutant. The highest gene expression level in culms. The highest expression levels in vascular bundles and in sub-epidermal regions, where developing sclerenchyma cells are located."(PubMedID : 30590744)@COBRA-like protein precursor, putative, expressed -
16 Sobic.008G137000 RALFL42 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
17 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
18 Sobic.001G238600 zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.002G332300 expressed protein -
20 Sobic.003G251800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@no apical meristem protein, putative, expressed -


Gene co-expression network
sample Sobic001G362100 Sobic001G362100 Sobic001G399200 Sobic001G399200 Sobic001G362100--Sobic001G399200 Sobic001G406700 Sobic001G406700 Sobic001G362100--Sobic001G406700 Sobic010G232500 Sobic010G232500 Sobic001G362100--Sobic010G232500 Sobic003G387500 Sobic003G387500 Sobic001G362100--Sobic003G387500 Sobic009G048000 Sobic009G048000 Sobic001G362100--Sobic009G048000 Sobic003G231500 Sobic003G231500 Sobic001G362100--Sobic003G231500 Sobic006G209300 Sobic006G209300 Sobic001G362100--Sobic006G209300 Sobic006G144600 Sobic006G144600 Sobic001G362100--Sobic006G144600 Sobic006G226200 Sobic006G226200 Sobic001G362100--Sobic006G226200 Sobic001G399200--Sobic001G406700 Sobic001G399200--Sobic006G144600 Sobic001G399200--Sobic010G232500 Sobic001G399200--Sobic003G387500 Sobic005G229100 Sobic005G229100 Sobic001G399200--Sobic005G229100 Sobic001G399200--Sobic001G362100 Sobic007G223600 Sobic007G223600 Sobic001G399200--Sobic007G223600 Sobic001G399200--Sobic006G226200 Sobic009G170500 Sobic009G170500 Sobic001G399200--Sobic009G170500 Sobic001G406700--Sobic003G387500 Sobic001G406700--Sobic006G144600 Sobic001G406700--Sobic001G399200 Sobic001G406700--Sobic009G170500 Sobic001G406700--Sobic010G232500 Sobic002G167600 Sobic002G167600 Sobic001G406700--Sobic002G167600 Sobic001G406700--Sobic005G229100 Sobic007G119500 Sobic007G119500 Sobic001G406700--Sobic007G119500 Sobic009G246700 Sobic009G246700 Sobic001G406700--Sobic009G246700 Sobic010G232500--Sobic006G144600 Sobic010G232500--Sobic001G406700 Sobic010G232500--Sobic005G229100 Sobic010G232500--Sobic003G387500 Sobic010G232500--Sobic006G226200 Sobic010G232500--Sobic002G167600 Sobic010G232500--Sobic001G399200 Sobic010G232500--Sobic003G231500 Sobic010G232500--Sobic007G223600 Sobic003G387500--Sobic001G406700 Sobic003G387500--Sobic006G144600 Sobic001G224300 Sobic001G224300 Sobic003G387500--Sobic001G224300 Sobic003G387500--Sobic010G232500 Sobic003G387500--Sobic002G167600 Sobic003G387500--Sobic009G170500 Sobic009G162700 Sobic009G162700 Sobic003G387500--Sobic009G162700 Sobic002G205500 Sobic002G205500 Sobic003G387500--Sobic002G205500 Sobic009G226900 Sobic009G226900 Sobic003G387500--Sobic009G226900 Sobic009G048000--Sobic006G226200 Sobic003G296400 Sobic003G296400 Sobic009G048000--Sobic003G296400 Sobic009G048000--Sobic002G205500 Sobic003G236701 Sobic003G236701 Sobic009G048000--Sobic003G236701 Sobic001G468300 Sobic001G468300 Sobic009G048000--Sobic001G468300 Sobic009G048000--Sobic009G226900 Sobic009G048000--Sobic001G224300 Sobic003G112200 Sobic003G112200 Sobic009G048000--Sobic003G112200 Sobic009G048000--Sobic007G223600 Sobic001G238600 Sobic001G238600 Sobic003G231500--Sobic001G238600 Sobic003G231500--Sobic003G236701 Sobic006G066500 Sobic006G066500 Sobic003G231500--Sobic006G066500 Sobic001G422300 Sobic001G422300 Sobic003G231500--Sobic001G422300 Sobic003G231500--Sobic006G226200 Sobic003G220000 Sobic003G220000 Sobic003G231500--Sobic003G220000 Sobic003G231500--Sobic006G209300 Sobic007G175400 Sobic007G175400 Sobic003G231500--Sobic007G175400 Sobic008G126000 Sobic008G126000 Sobic003G231500--Sobic008G126000 Sobic006G209300--Sobic003G231500 Sobic002G164600 Sobic002G164600 Sobic006G209300--Sobic002G164600 Sobic006G209300--Sobic003G236701 Sobic006G209300--Sobic006G226200 Sobic006G209300--Sobic010G232500 Sobic006G209300--Sobic007G223600 Sobic006G209300--Sobic006G066500 Sobic006G209300--Sobic003G112200 Sobic008G059800 Sobic008G059800 Sobic006G209300--Sobic008G059800 Sobic006G144600--Sobic001G406700 Sobic006G144600--Sobic010G232500 Sobic006G144600--Sobic003G387500 Sobic006G144600--Sobic002G167600 Sobic006G144600--Sobic009G170500 Sobic006G144600--Sobic001G399200 Sobic006G144600--Sobic005G229100 Sobic006G144600--Sobic007G119500 Sobic006G144600--Sobic007G223600 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic006G226200--Sobic003G296400 Sobic006G226200--Sobic009G048000 Sobic006G226200--Sobic003G231500 Sobic006G226200--Sobic002G205500
Octagon: transcription factors


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