Gene annotation
Transcriptome id Sobic.006G083700.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6PKY8
Pfam -
Panther DB PTHR33696 PTHR33696:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g35390.1 : expressed protein
MaizeGDB (Corn) Zm00025a056084 , Zm00025a011348 , Zm00025a020623
Brachypodium KQJ99846
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G083700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G201000 protein transport protein-related, putative, expressed -
2 Sobic.001G285200 protein transport protein-related, putative, expressed -
3 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
4 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
5 Sobic.005G055600 myosin heavy chain-related, putative, expressed -
6 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
7 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
8 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
9 Sobic.004G274800 protein transport protein-related, putative, expressed -
10 Sobic.005G076400 rp3 protein, putative, expressed -
11 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
12 Sobic.009G061000 DNA binding protein, putative, expressed -
13 Sobic.008G039800 rhoGAP domain containing protein, expressed -
14 Sobic.001G362100 nodulation protein-related, putative, expressed -
15 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
16 Sobic.010G216600 expressed protein -
17 Sobic.007G040301 - -
18 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
19 Sobic.008G022500 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
20 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -


Gene co-expression network
sample Sobic006G083700 Sobic006G083700 Sobic001G201000 Sobic001G201000 Sobic006G083700--Sobic001G201000 Sobic001G285200 Sobic001G285200 Sobic006G083700--Sobic001G285200 Sobic001G437500 Sobic001G437500 Sobic006G083700--Sobic001G437500 Sobic003G135400 Sobic003G135400 Sobic006G083700--Sobic003G135400 Sobic005G055600 Sobic005G055600 Sobic006G083700--Sobic005G055600 Sobic004G243800 Sobic004G243800 Sobic006G083700--Sobic004G243800 Sobic001G196000 Sobic001G196000 Sobic006G083700--Sobic001G196000 Sobic009G206500 Sobic009G206500 Sobic006G083700--Sobic009G206500 Sobic004G274800 Sobic004G274800 Sobic006G083700--Sobic004G274800 Sobic001G201000--Sobic001G285200 Sobic001G201000--Sobic005G055600 Sobic002G320600 Sobic002G320600 Sobic001G201000--Sobic002G320600 Sobic003G031700 Sobic003G031700 Sobic001G201000--Sobic003G031700 Sobic001G023500 Sobic001G023500 Sobic001G201000--Sobic001G023500 Sobic007G116800 Sobic007G116800 Sobic001G201000--Sobic007G116800 Sobic010G211800 Sobic010G211800 Sobic001G201000--Sobic010G211800 Sobic007G087800 Sobic007G087800 Sobic001G201000--Sobic007G087800 Sobic001G207600 Sobic001G207600 Sobic001G201000--Sobic001G207600 Sobic002G419200 Sobic002G419200 Sobic001G285200--Sobic002G419200 Sobic001G285200--Sobic001G201000 Sobic006G272500 Sobic006G272500 Sobic001G285200--Sobic006G272500 Sobic001G285200--Sobic005G055600 Sobic003G277200 Sobic003G277200 Sobic001G285200--Sobic003G277200 Sobic008G192700 Sobic008G192700 Sobic001G285200--Sobic008G192700 Sobic003G338200 Sobic003G338200 Sobic001G285200--Sobic003G338200 Sobic001G285200--Sobic010G211800 Sobic009G175100 Sobic009G175100 Sobic001G285200--Sobic009G175100 Sobic001G437500--Sobic001G196000 Sobic001G437500--Sobic004G243800 Sobic001G437500--Sobic004G274800 Sobic001G437500--Sobic009G206500 Sobic007G139500 Sobic007G139500 Sobic001G437500--Sobic007G139500 Sobic001G159800 Sobic001G159800 Sobic001G437500--Sobic001G159800 Sobic009G061000 Sobic009G061000 Sobic001G437500--Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic001G437500--Sobic006G267500 Sobic002G276600 Sobic002G276600 Sobic001G437500--Sobic002G276600 Sobic003G410600 Sobic003G410600 Sobic003G135400--Sobic003G410600 Sobic001G078600 Sobic001G078600 Sobic003G135400--Sobic001G078600 Sobic003G294500 Sobic003G294500 Sobic003G135400--Sobic003G294500 Sobic004G197400 Sobic004G197400 Sobic003G135400--Sobic004G197400 Sobic008G141200 Sobic008G141200 Sobic003G135400--Sobic008G141200 Sobic005G144600 Sobic005G144600 Sobic003G135400--Sobic005G144600 Sobic007G219400 Sobic007G219400 Sobic003G135400--Sobic007G219400 Sobic001G103000 Sobic001G103000 Sobic003G135400--Sobic001G103000 Sobic005G047100 Sobic005G047100 Sobic003G135400--Sobic005G047100 Sobic004G328300 Sobic004G328300 Sobic005G055600--Sobic004G328300 Sobic005G055600--Sobic001G201000 Sobic005G055600--Sobic001G285200 Sobic002G074000 Sobic002G074000 Sobic005G055600--Sobic002G074000 Sobic001G416000 Sobic001G416000 Sobic005G055600--Sobic001G416000 Sobic009G202801 Sobic009G202801 Sobic005G055600--Sobic009G202801 Sobic005G055600--Sobic009G175100 Sobic005G055600--Sobic007G087800 Sobic005G055600--Sobic001G023500 Sobic004G243800--Sobic001G437500 Sobic001G037400 Sobic001G037400 Sobic004G243800--Sobic001G037400 Sobic004G243800--Sobic001G196000 Sobic010G165100 Sobic010G165100 Sobic004G243800--Sobic010G165100 Sobic004G243800--Sobic002G276600 Sobic009G211800 Sobic009G211800 Sobic004G243800--Sobic009G211800 Sobic008G174900 Sobic008G174900 Sobic004G243800--Sobic008G174900 Sobic002G045200 Sobic002G045200 Sobic004G243800--Sobic002G045200 Sobic002G142500 Sobic002G142500 Sobic004G243800--Sobic002G142500 Sobic001G196000--Sobic001G437500 Sobic001G196000--Sobic007G139500 Sobic001G196000--Sobic004G243800 Sobic001G196000--Sobic009G206500 Sobic001G196000--Sobic004G274800 Sobic006G081000 Sobic006G081000 Sobic001G196000--Sobic006G081000 Sobic007G173000 Sobic007G173000 Sobic001G196000--Sobic007G173000 Sobic008G174966 Sobic008G174966 Sobic001G196000--Sobic008G174966 Sobic001G196000--Sobic001G159800 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic009G206500--Sobic006G267500 Sobic009G206500--Sobic001G437500 Sobic001G144200 Sobic001G144200 Sobic009G206500--Sobic001G144200 Sobic007G040301 Sobic007G040301 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G026101 Sobic009G026101 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic004G274800--Sobic001G437500 Sobic004G274800--Sobic006G081000 Sobic004G274800--Sobic007G139500 Sobic004G274800--Sobic001G196000 Sobic004G274800--Sobic009G206500 Sobic003G161500 Sobic003G161500 Sobic004G274800--Sobic003G161500 Sobic004G274800--Sobic009G026101 Sobic004G274800--Sobic007G040301 Sobic004G274800--Sobic003G135400
Octagon: transcription factors


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