Gene annotation
Transcriptome id Sobic.008G022500.1
Synonym Sb08g002010, GAUT7, LGT7
Functional annotation glycosyl transferase, family 8, putative, expressed
UniProt C5YR34
Pfam PF01501
Panther DB PTHR32116 PTHR32116:SF22
NCBI CDD -
KEGG Orthology K13648; alpha-1,4-galacturonosyltransferase
Gene Ontology GO:0016757; transferase activity, transferring glycosyl groups


Orthologs (automatic annotation)
TAIR AT2G38650 : galacturonosyltransferase 7
RAP-DB (Rice) LOC_Os12g02910.1 : glycosyl transferase, family 8, putative, expressed
MaizeGDB (Corn) Zm00025a053755 , Zm00025a055019
Brachypodium KQJ92498 , KQJ82958 , KQK02223
Barley HORVU5Hr1G045700.9 , HORVU5Hr1G045700.8 , HORVU5Hr1G045700.7 , HORVU5Hr1G045700.6 , HORVU5Hr1G045700.5 , HORVU5Hr1G045700.4 , HORVU5Hr1G045700.3 , HORVU5Hr1G045700.2 , HORVU5Hr1G045700.1 , HORVU5Hr1G045700.17 , HORVU5Hr1G045700.16 , HORVU5Hr1G045700.15 , HORVU5Hr1G045700.14 , HORVU5Hr1G045700.13 , HORVU5Hr1G045700.12 , HORVU5Hr1G045700.11 , HORVU5Hr1G045700.10 , HORVU5Hr1G045700.19 , HORVU5Hr1G045700.18 , HORVU5Hr1G045700.22 , HORVU5Hr1G045700.20 , HORVU5Hr1G045700.21
Wheat TraesCS5A02G143800 , TraesCS5A02G143800 , TraesCS5B02G142900 , TraesCS5D02G148100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G328300 expressed protein -
2 Sobic.002G290000 helicase, putative, expressed K15362: BRIP1, BACH1, fanconi anemia group J protein
3 Sobic.004G053900 expressed protein -
4 Sobic.006G029300 expressed protein K15505: DNA repair protein RAD5
5 Sobic.010G008900 kinesin motor domain containing protein, expressed K11498: centromeric protein E
6 Sobic.003G315700 AAA-type ATPase family protein, putative, expressed -
7 Sobic.005G055600 myosin heavy chain-related, putative, expressed -
8 Sobic.010G147700 WD domain, G-beta repeat domain containing protein, expressed K11274: WDHD1, chromosome transmission fidelity protein 4
9 Sobic.001G013400 nuf2 family protein, expressed -
10 Sobic.002G113400 dnaJ domain containing protein, expressed -
11 Sobic.005G110535 - K02540: DNA replication licensing factor MCM2
12 Sobic.003G201000 WD domain, G-beta repeat domain containing protein, expressed -
13 Sobic.001G023500 expressed protein -
14 Sobic.008G148000 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15
15 Sobic.001G361200 expressed protein -
16 Sobic.001G025900 expressed protein -
17 Sobic.002G272300 expressed protein -
18 Sobic.004G109750 - -
19 Sobic.002G255500 expressed protein -
20 Sobic.009G087000 MCM6 - Putative minichromosome maintenance MCM complex subunit 6, expressed K02542: DNA replication licensing factor MCM6


Gene co-expression network
sample Sobic008G022500 Sobic008G022500 Sobic004G328300 Sobic004G328300 Sobic008G022500--Sobic004G328300 Sobic002G290000 Sobic002G290000 Sobic008G022500--Sobic002G290000 Sobic004G053900 Sobic004G053900 Sobic008G022500--Sobic004G053900 Sobic006G029300 Sobic006G029300 Sobic008G022500--Sobic006G029300 Sobic010G008900 Sobic010G008900 Sobic008G022500--Sobic010G008900 Sobic003G315700 Sobic003G315700 Sobic008G022500--Sobic003G315700 Sobic005G055600 Sobic005G055600 Sobic008G022500--Sobic005G055600 Sobic010G147700 Sobic010G147700 Sobic008G022500--Sobic010G147700 Sobic001G013400 Sobic001G013400 Sobic008G022500--Sobic001G013400 Sobic004G328300--Sobic005G055600 Sobic006G193100 Sobic006G193100 Sobic004G328300--Sobic006G193100 Sobic004G328300--Sobic003G315700 Sobic004G328300--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic004G328300--Sobic001G025900 Sobic001G023500 Sobic001G023500 Sobic004G328300--Sobic001G023500 Sobic001G154300 Sobic001G154300 Sobic004G328300--Sobic001G154300 Sobic009G202801 Sobic009G202801 Sobic004G328300--Sobic009G202801 Sobic002G113400 Sobic002G113400 Sobic004G328300--Sobic002G113400 Sobic005G110535 Sobic005G110535 Sobic002G290000--Sobic005G110535 Sobic001G377700 Sobic001G377700 Sobic002G290000--Sobic001G377700 Sobic007G125300 Sobic007G125300 Sobic002G290000--Sobic007G125300 Sobic009G087000 Sobic009G087000 Sobic002G290000--Sobic009G087000 Sobic002G290000--Sobic010G147700 Sobic002G290000--Sobic001G013400 Sobic002G290000--Sobic002G113400 Sobic008G129200 Sobic008G129200 Sobic002G290000--Sobic008G129200 Sobic002G290000--Sobic004G053900 Sobic004G053900--Sobic002G113400 Sobic002G297500 Sobic002G297500 Sobic004G053900--Sobic002G297500 Sobic004G053900--Sobic002G290000 Sobic004G053900--Sobic007G125300 Sobic008G148000 Sobic008G148000 Sobic004G053900--Sobic008G148000 Sobic004G053900--Sobic005G110535 Sobic010G051100 Sobic010G051100 Sobic004G053900--Sobic010G051100 Sobic006G179200 Sobic006G179200 Sobic004G053900--Sobic006G179200 Sobic004G053900--Sobic004G328300 Sobic006G029300--Sobic010G147700 Sobic006G029300--Sobic009G087000 Sobic007G168900 Sobic007G168900 Sobic006G029300--Sobic007G168900 Sobic003G369200 Sobic003G369200 Sobic006G029300--Sobic003G369200 Sobic003G294500 Sobic003G294500 Sobic006G029300--Sobic003G294500 Sobic003G201000 Sobic003G201000 Sobic006G029300--Sobic003G201000 Sobic001G029800 Sobic001G029800 Sobic006G029300--Sobic001G029800 Sobic005G144600 Sobic005G144600 Sobic006G029300--Sobic005G144600 Sobic006G029300--Sobic005G110535 Sobic005G000500 Sobic005G000500 Sobic010G008900--Sobic005G000500 Sobic003G314900 Sobic003G314900 Sobic010G008900--Sobic003G314900 Sobic001G170800 Sobic001G170800 Sobic010G008900--Sobic001G170800 Sobic010G008900--Sobic007G168900 Sobic010G008900--Sobic001G029800 Sobic001G177900 Sobic001G177900 Sobic010G008900--Sobic001G177900 Sobic010G008900--Sobic003G294500 Sobic004G271300 Sobic004G271300 Sobic010G008900--Sobic004G271300 Sobic010G008900--Sobic008G148000 Sobic003G315700--Sobic008G148000 Sobic003G315700--Sobic006G193100 Sobic004G306100 Sobic004G306100 Sobic003G315700--Sobic004G306100 Sobic003G315700--Sobic002G290000 Sobic003G315700--Sobic009G202801 Sobic003G315700--Sobic004G328300 Sobic003G409600 Sobic003G409600 Sobic003G315700--Sobic003G409600 Sobic003G315700--Sobic002G113400 Sobic009G052100 Sobic009G052100 Sobic003G315700--Sobic009G052100 Sobic005G055600--Sobic004G328300 Sobic001G201000 Sobic001G201000 Sobic005G055600--Sobic001G201000 Sobic001G285200 Sobic001G285200 Sobic005G055600--Sobic001G285200 Sobic002G074000 Sobic002G074000 Sobic005G055600--Sobic002G074000 Sobic001G416000 Sobic001G416000 Sobic005G055600--Sobic001G416000 Sobic005G055600--Sobic009G202801 Sobic009G175100 Sobic009G175100 Sobic005G055600--Sobic009G175100 Sobic007G087800 Sobic007G087800 Sobic005G055600--Sobic007G087800 Sobic005G055600--Sobic001G023500 Sobic010G147700--Sobic006G029300 Sobic010G147700--Sobic009G087000 Sobic010G147700--Sobic005G110535 Sobic010G147700--Sobic003G369200 Sobic010G147700--Sobic007G168900 Sobic010G147700--Sobic008G129200 Sobic010G147700--Sobic005G144600 Sobic003G183700 Sobic003G183700 Sobic010G147700--Sobic003G183700 Sobic010G147700--Sobic003G201000 Sobic001G013400--Sobic001G025900 Sobic007G007800 Sobic007G007800 Sobic001G013400--Sobic007G007800 Sobic001G013400--Sobic002G290000 Sobic001G013400--Sobic002G113400 Sobic001G013400--Sobic008G129200 Sobic001G142000 Sobic001G142000 Sobic001G013400--Sobic001G142000 Sobic001G013400--Sobic005G110535 Sobic001G083300 Sobic001G083300 Sobic001G013400--Sobic001G083300 Sobic004G331600 Sobic004G331600 Sobic001G013400--Sobic004G331600
Octagon: transcription factors


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