Gene annotation
Transcriptome id Sobic.001G023500.2,Sobic.001G023500.3,Sobic.001G023500.1
Synonym Sb01g002240
Functional annotation expressed protein
UniProt C5WTY8
Pfam PF14309 PF14383 PF14383 PF14309
Panther DB PTHR21726:SF45 PTHR21726 PTHR21726 PTHR21726:SF45
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G58650 : -
RAP-DB (Rice) LOC_Os03g61620.1 : expressed protein
MaizeGDB (Corn) Zm00025a016377 , Zm00025a008929
Brachypodium KQJ83089 , KQJ83099
Barley HORVU5Hr1G116400.10 , HORVU5Hr1G116400.3 , HORVU5Hr1G116400.2 , HORVU5Hr1G116400.1 , HORVU5Hr1G116400.7 , HORVU5Hr1G116400.6 , HORVU5Hr1G116400.5 , HORVU5Hr1G116400.4 , HORVU5Hr1G116400.9 , HORVU5Hr1G116400.8
Wheat TraesCS5B02G509300 , TraesCS5B02G509200 , TraesCS5D02G509300
Populus -


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cDNA sequences
Sobic.001G023500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G328300 expressed protein -
2 Sobic.001G154300 DNA binding protein, putative, expressed -
3 Sobic.001G201000 protein transport protein-related, putative, expressed -
4 Sobic.005G055600 myosin heavy chain-related, putative, expressed -
5 Sobic.010G231600 cytochrome P450, putative, expressed -
6 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
7 Sobic.003G045700 pleiotropic drug resistance protein, putative, expressed -
8 Sobic.003G031700 protein kinase family protein, putative, expressed -
9 Sobic.001G285200 protein transport protein-related, putative, expressed -
10 Sobic.001G523700 erythronate-4-phosphate dehydrogenase, putative, expressed -
11 Sobic.001G361200 expressed protein -
12 Sobic.006G193100 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
13 Sobic.008G022500 glycosyl transferase, family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
14 Sobic.003G226700 kinesin motor domain containing protein, putative, expressed K10393: KIF2_24, kinesin family member 2/24
15 Sobic.002G370400 expressed protein -
16 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
17 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
18 Sobic.005G156100 Long chain acyl CoA synthetase 2 LACS2 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
19 Sobic.002G293700 ATXR, putative, expressed -
20 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -


Gene co-expression network
sample Sobic001G023500 Sobic001G023500 Sobic004G328300 Sobic004G328300 Sobic001G023500--Sobic004G328300 Sobic001G154300 Sobic001G154300 Sobic001G023500--Sobic001G154300 Sobic001G201000 Sobic001G201000 Sobic001G023500--Sobic001G201000 Sobic005G055600 Sobic005G055600 Sobic001G023500--Sobic005G055600 Sobic010G231600 Sobic010G231600 Sobic001G023500--Sobic010G231600 Sobic002G320600 Sobic002G320600 Sobic001G023500--Sobic002G320600 Sobic003G045700 Sobic003G045700 Sobic001G023500--Sobic003G045700 Sobic003G031700 Sobic003G031700 Sobic001G023500--Sobic003G031700 Sobic001G285200 Sobic001G285200 Sobic001G023500--Sobic001G285200 Sobic004G328300--Sobic005G055600 Sobic006G193100 Sobic006G193100 Sobic004G328300--Sobic006G193100 Sobic003G315700 Sobic003G315700 Sobic004G328300--Sobic003G315700 Sobic004G053900 Sobic004G053900 Sobic004G328300--Sobic004G053900 Sobic001G025900 Sobic001G025900 Sobic004G328300--Sobic001G025900 Sobic004G328300--Sobic001G023500 Sobic004G328300--Sobic001G154300 Sobic009G202801 Sobic009G202801 Sobic004G328300--Sobic009G202801 Sobic002G113400 Sobic002G113400 Sobic004G328300--Sobic002G113400 Sobic001G381500 Sobic001G381500 Sobic001G154300--Sobic001G381500 Sobic001G154300--Sobic004G328300 Sobic001G361200 Sobic001G361200 Sobic001G154300--Sobic001G361200 Sobic001G154300--Sobic001G023500 Sobic002G192900 Sobic002G192900 Sobic001G154300--Sobic002G192900 Sobic004G306100 Sobic004G306100 Sobic001G154300--Sobic004G306100 Sobic001G248400 Sobic001G248400 Sobic001G154300--Sobic001G248400 Sobic002G308000 Sobic002G308000 Sobic001G154300--Sobic002G308000 Sobic006G127200 Sobic006G127200 Sobic001G154300--Sobic006G127200 Sobic001G201000--Sobic001G285200 Sobic001G201000--Sobic005G055600 Sobic001G201000--Sobic002G320600 Sobic001G201000--Sobic003G031700 Sobic001G201000--Sobic001G023500 Sobic007G116800 Sobic007G116800 Sobic001G201000--Sobic007G116800 Sobic010G211800 Sobic010G211800 Sobic001G201000--Sobic010G211800 Sobic007G087800 Sobic007G087800 Sobic001G201000--Sobic007G087800 Sobic001G207600 Sobic001G207600 Sobic001G201000--Sobic001G207600 Sobic005G055600--Sobic004G328300 Sobic005G055600--Sobic001G201000 Sobic005G055600--Sobic001G285200 Sobic002G074000 Sobic002G074000 Sobic005G055600--Sobic002G074000 Sobic001G416000 Sobic001G416000 Sobic005G055600--Sobic001G416000 Sobic005G055600--Sobic009G202801 Sobic009G175100 Sobic009G175100 Sobic005G055600--Sobic009G175100 Sobic005G055600--Sobic007G087800 Sobic005G055600--Sobic001G023500 Sobic010G231600--Sobic003G045700 Sobic010G231600--Sobic001G207600 Sobic006G014400 Sobic006G014400 Sobic010G231600--Sobic006G014400 Sobic010G231600--Sobic001G023500 Sobic004G283800 Sobic004G283800 Sobic010G231600--Sobic004G283800 Sobic001G441700 Sobic001G441700 Sobic010G231600--Sobic001G441700 Sobic009G031400 Sobic009G031400 Sobic010G231600--Sobic009G031400 Sobic009G173200 Sobic009G173200 Sobic010G231600--Sobic009G173200 Sobic001G266200 Sobic001G266200 Sobic010G231600--Sobic001G266200 Sobic002G320600--Sobic003G031700 Sobic002G320600--Sobic001G201000 Sobic003G420300 Sobic003G420300 Sobic002G320600--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic002G320600--Sobic003G292700 Sobic002G320600--Sobic010G211800 Sobic002G362700 Sobic002G362700 Sobic002G320600--Sobic002G362700 Sobic003G226700 Sobic003G226700 Sobic002G320600--Sobic003G226700 Sobic008G127550 Sobic008G127550 Sobic002G320600--Sobic008G127550 Sobic002G320600--Sobic004G328300 Sobic003G045700--Sobic010G231600 Sobic003G045700--Sobic001G207600 Sobic003G045700--Sobic004G283800 Sobic005G156100 Sobic005G156100 Sobic003G045700--Sobic005G156100 Sobic003G045700--Sobic009G031400 Sobic003G045700--Sobic001G441700 Sobic006G125800 Sobic006G125800 Sobic003G045700--Sobic006G125800 Sobic003G045700--Sobic001G023500 Sobic003G045700--Sobic009G173200 Sobic003G031700--Sobic002G362700 Sobic003G031700--Sobic002G320600 Sobic003G031700--Sobic006G193100 Sobic001G074100 Sobic001G074100 Sobic003G031700--Sobic001G074100 Sobic003G031700--Sobic009G202801 Sobic001G522300 Sobic001G522300 Sobic003G031700--Sobic001G522300 Sobic001G008300 Sobic001G008300 Sobic003G031700--Sobic001G008300 Sobic003G031700--Sobic010G211800 Sobic003G031700--Sobic007G087800 Sobic002G419200 Sobic002G419200 Sobic001G285200--Sobic002G419200 Sobic001G285200--Sobic001G201000 Sobic006G272500 Sobic006G272500 Sobic001G285200--Sobic006G272500 Sobic001G285200--Sobic005G055600 Sobic003G277200 Sobic003G277200 Sobic001G285200--Sobic003G277200 Sobic008G192700 Sobic008G192700 Sobic001G285200--Sobic008G192700 Sobic003G338200 Sobic003G338200 Sobic001G285200--Sobic003G338200 Sobic001G285200--Sobic010G211800 Sobic001G285200--Sobic009G175100
Octagon: transcription factors


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