Gene annotation
Transcriptome id Sobic.001G523700.1,Sobic.001G523700.3
Synonym Sb01g048780, AN
Functional annotation erythronate-4-phosphate dehydrogenase, putative, expressed
UniProt A0A1Z5SBV7 , A0A1B6QQU3
Pfam PF02826
Panther DB PTHR10996 PTHR10996:SF134
NCBI CDD KOG0067; Transcription factor CtBP
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G01510 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os10g38900.1 : erythronate-4-phosphate dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a000350 , Zm00025a003128 , Zm00025a000348
Brachypodium KQJ97572 , KQJ97571 , PNT78284 , PNT78283 , PNT78282 , PNT78281 , PNT78280
Barley HORVU1Hr1G049460.2 , HORVU1Hr1G049460.3 , HORVU1Hr1G049460.1 , HORVU1Hr1G049460.4 , HORVU4Hr1G083270.1 , HORVU4Hr1G083270.2 , HORVU4Hr1G083270.3 , HORVU4Hr1G083270.4 , HORVU4Hr1G083270.5
Wheat TraesCS1D02G191600 , TraesCS1D02G191600 , TraesCS4B02G319000 , TraesCS4D02G315800 , TraesCS5A02G493200 , TraesCS1A02G185300 , TraesCS1A02G185300 , TraesCS4D02G315900 , TraesCS1B02G193200 , TraesCS1B02G193200 , TraesCS4D02G315500
Populus -


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cDNA sequences
Sobic.001G523700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G177000 RNA-dependent RNA polymerase, putative, expressed K11699: RDR, RNA-dependent RNA polymerase
2 Sobic.001G023500 expressed protein -
3 Sobic.002G293700 ATXR, putative, expressed -
4 Sobic.003G135500 sugar transporter superfamily, putative, expressed -
5 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
6 Sobic.003G104100 expressed protein -
7 Sobic.002G370400 expressed protein -
8 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
9 Sobic.009G167100 TBC domain containing protein, expressed -
10 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
11 Sobic.006G241800 receptor kinase, putative, expressed -
12 Sobic.002G142500 expressed protein -
13 Sobic.003G045700 pleiotropic drug resistance protein, putative, expressed -
14 Sobic.002G425200 expressed protein -
15 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
16 Sobic.001G298800 ternary complex factor MIP1, putative, expressed -
17 Sobic.004G342300 expressed protein -
18 Sobic.010G143600 ATP-binding region, ATPase-like domain containing protein, expressed -
19 Sobic.001G361200 expressed protein -
20 Sobic.002G338900 - -


Gene co-expression network
sample Sobic001G523700 Sobic001G523700 Sobic003G177000 Sobic003G177000 Sobic001G523700--Sobic003G177000 Sobic001G023500 Sobic001G023500 Sobic001G523700--Sobic001G023500 Sobic002G293700 Sobic002G293700 Sobic001G523700--Sobic002G293700 Sobic003G135500 Sobic003G135500 Sobic001G523700--Sobic003G135500 Sobic002G311000 Sobic002G311000 Sobic001G523700--Sobic002G311000 Sobic003G104100 Sobic003G104100 Sobic001G523700--Sobic003G104100 Sobic002G370400 Sobic002G370400 Sobic001G523700--Sobic002G370400 Sobic002G320600 Sobic002G320600 Sobic001G523700--Sobic002G320600 Sobic009G167100 Sobic009G167100 Sobic001G523700--Sobic009G167100 Sobic002G425200 Sobic002G425200 Sobic003G177000--Sobic002G425200 Sobic008G038200 Sobic008G038200 Sobic003G177000--Sobic008G038200 Sobic001G300000 Sobic001G300000 Sobic003G177000--Sobic001G300000 Sobic001G541000 Sobic001G541000 Sobic003G177000--Sobic001G541000 Sobic007G161600 Sobic007G161600 Sobic003G177000--Sobic007G161600 Sobic006G280100 Sobic006G280100 Sobic003G177000--Sobic006G280100 Sobic003G177000--Sobic001G523700 Sobic007G159200 Sobic007G159200 Sobic003G177000--Sobic007G159200 Sobic008G045000 Sobic008G045000 Sobic003G177000--Sobic008G045000 Sobic004G328300 Sobic004G328300 Sobic001G023500--Sobic004G328300 Sobic001G154300 Sobic001G154300 Sobic001G023500--Sobic001G154300 Sobic001G201000 Sobic001G201000 Sobic001G023500--Sobic001G201000 Sobic005G055600 Sobic005G055600 Sobic001G023500--Sobic005G055600 Sobic010G231600 Sobic010G231600 Sobic001G023500--Sobic010G231600 Sobic001G023500--Sobic002G320600 Sobic003G045700 Sobic003G045700 Sobic001G023500--Sobic003G045700 Sobic003G031700 Sobic003G031700 Sobic001G023500--Sobic003G031700 Sobic001G285200 Sobic001G285200 Sobic001G023500--Sobic001G285200 Sobic006G272500 Sobic006G272500 Sobic002G293700--Sobic006G272500 Sobic009G124800 Sobic009G124800 Sobic002G293700--Sobic009G124800 Sobic006G257200 Sobic006G257200 Sobic002G293700--Sobic006G257200 Sobic006G241800 Sobic006G241800 Sobic002G293700--Sobic006G241800 Sobic002G071850 Sobic002G071850 Sobic002G293700--Sobic002G071850 Sobic002G293700--Sobic001G285200 Sobic002G293700--Sobic002G370400 Sobic008G169400 Sobic008G169400 Sobic002G293700--Sobic008G169400 Sobic002G293700--Sobic003G031700 Sobic003G135500--Sobic006G280100 Sobic003G431600 Sobic003G431600 Sobic003G135500--Sobic003G431600 Sobic003G299500 Sobic003G299500 Sobic003G135500--Sobic003G299500 Sobic006G181800 Sobic006G181800 Sobic003G135500--Sobic006G181800 Sobic009G120400 Sobic009G120400 Sobic003G135500--Sobic009G120400 Sobic003G360300 Sobic003G360300 Sobic003G135500--Sobic003G360300 Sobic008G080500 Sobic008G080500 Sobic003G135500--Sobic008G080500 Sobic008G092800 Sobic008G092800 Sobic003G135500--Sobic008G092800 Sobic002G079100 Sobic002G079100 Sobic003G135500--Sobic002G079100 Sobic002G311000--Sobic006G241800 Sobic003G291000 Sobic003G291000 Sobic002G311000--Sobic003G291000 Sobic003G078300 Sobic003G078300 Sobic002G311000--Sobic003G078300 Sobic002G142500 Sobic002G142500 Sobic002G311000--Sobic002G142500 Sobic002G045200 Sobic002G045200 Sobic002G311000--Sobic002G045200 Sobic010G211800 Sobic010G211800 Sobic002G311000--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G311000--Sobic001G074100 Sobic010G165100 Sobic010G165100 Sobic002G311000--Sobic010G165100 Sobic002G311000--Sobic006G257200 Sobic001G395200 Sobic001G395200 Sobic003G104100--Sobic001G395200 Sobic008G052300 Sobic008G052300 Sobic003G104100--Sobic008G052300 Sobic005G163400 Sobic005G163400 Sobic003G104100--Sobic005G163400 Sobic001G425700 Sobic001G425700 Sobic003G104100--Sobic001G425700 Sobic006G067700 Sobic006G067700 Sobic003G104100--Sobic006G067700 Sobic010G024500 Sobic010G024500 Sobic003G104100--Sobic010G024500 Sobic004G179800 Sobic004G179800 Sobic003G104100--Sobic004G179800 Sobic006G084300 Sobic006G084300 Sobic003G104100--Sobic006G084300 Sobic009G259900 Sobic009G259900 Sobic003G104100--Sobic009G259900 Sobic001G487200 Sobic001G487200 Sobic002G370400--Sobic001G487200 Sobic001G231200 Sobic001G231200 Sobic002G370400--Sobic001G231200 Sobic004G315700 Sobic004G315700 Sobic002G370400--Sobic004G315700 Sobic002G370400--Sobic006G272500 Sobic009G212100 Sobic009G212100 Sobic002G370400--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic002G370400--Sobic001G296800 Sobic002G370400--Sobic009G124800 Sobic003G153900 Sobic003G153900 Sobic002G370400--Sobic003G153900 Sobic002G370400--Sobic010G211800 Sobic002G320600--Sobic003G031700 Sobic002G320600--Sobic001G201000 Sobic003G420300 Sobic003G420300 Sobic002G320600--Sobic003G420300 Sobic003G292700 Sobic003G292700 Sobic002G320600--Sobic003G292700 Sobic002G320600--Sobic010G211800 Sobic002G362700 Sobic002G362700 Sobic002G320600--Sobic002G362700 Sobic003G226700 Sobic003G226700 Sobic002G320600--Sobic003G226700 Sobic008G127550 Sobic008G127550 Sobic002G320600--Sobic008G127550 Sobic002G320600--Sobic004G328300 Sobic010G250800 Sobic010G250800 Sobic009G167100--Sobic010G250800 Sobic009G061000 Sobic009G061000 Sobic009G167100--Sobic009G061000 Sobic009G167100--Sobic006G257200 Sobic001G385400 Sobic001G385400 Sobic009G167100--Sobic001G385400 Sobic008G015200 Sobic008G015200 Sobic009G167100--Sobic008G015200 Sobic009G167100--Sobic002G320600 Sobic003G027800 Sobic003G027800 Sobic009G167100--Sobic003G027800 Sobic009G052100 Sobic009G052100 Sobic009G167100--Sobic009G052100 Sobic008G192700 Sobic008G192700 Sobic009G167100--Sobic008G192700
Octagon: transcription factors


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