Gene annotation
Transcriptome id Sobic.001G298800.1
Synonym Sb01g029110
Functional annotation ternary complex factor MIP1, putative, expressed
UniProt C5WSD0
Pfam PF14389 PF04784
Panther DB PTHR23054 PTHR23054:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47380 : Protein of unknown function, DUF547
RAP-DB (Rice) LOC_Os10g41040.2 : ternary complex factor MIP1, putative, expressed
MaizeGDB (Corn) Zm00025a003317
Brachypodium KQJ97785 , KQJ97786 , PNT67878
Barley HORVU1Hr1G056170.1 , HORVU1Hr1G056170.2 , HORVU1Hr1G056170.3
Wheat TraesCS1B02G234000 , TraesCS3A02G146900 , TraesCS1A02G220900 , TraesCS3A02G146900 , TraesCS1D02G222500 , TraesCS1D02G222500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G129700 serine/threonine-protein kinase, putative, expressed -
2 Sobic.005G104100 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.005G156100 Long chain acyl CoA synthetase 2 LACS2 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
4 Sobic.008G038200 TKL_IRAK_CR4L.1 - The CR4L subfamily has homology with Crinkly4, expressed -
5 Sobic.007G065300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein
6 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
7 Sobic.007G128100 expressed protein -
8 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
9 Sobic.006G093200 PHD finger protein, putative, expressed -
10 Sobic.001G518000 protein kinase, putative, expressed -
11 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
12 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
13 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
14 Sobic.003G283400 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
16 Sobic.010G135300 expressed protein -
17 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
18 Sobic.001G439800 Subtilisin-like serine protease 2("PubMedID : 26759170,PubMedID : 24597475")@OsSub28 - Putative Subtilisin homologue, expressed -
19 Sobic.002G142500 expressed protein -
20 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic001G298800 Sobic001G298800 Sobic009G129700 Sobic009G129700 Sobic001G298800--Sobic009G129700 Sobic005G104100 Sobic005G104100 Sobic001G298800--Sobic005G104100 Sobic005G156100 Sobic005G156100 Sobic001G298800--Sobic005G156100 Sobic008G038200 Sobic008G038200 Sobic001G298800--Sobic008G038200 Sobic007G065300 Sobic007G065300 Sobic001G298800--Sobic007G065300 Sobic001G074000 Sobic001G074000 Sobic001G298800--Sobic001G074000 Sobic007G128100 Sobic007G128100 Sobic001G298800--Sobic007G128100 Sobic001G522300 Sobic001G522300 Sobic001G298800--Sobic001G522300 Sobic006G093200 Sobic006G093200 Sobic001G298800--Sobic006G093200 Sobic009G129700--Sobic001G074000 Sobic009G129700--Sobic001G298800 Sobic009G129700--Sobic001G522300 Sobic003G019900 Sobic003G019900 Sobic009G129700--Sobic003G019900 Sobic009G129700--Sobic005G104100 Sobic003G070600 Sobic003G070600 Sobic009G129700--Sobic003G070600 Sobic003G283400 Sobic003G283400 Sobic009G129700--Sobic003G283400 Sobic001G199400 Sobic001G199400 Sobic009G129700--Sobic001G199400 Sobic003G360700 Sobic003G360700 Sobic009G129700--Sobic003G360700 Sobic005G104100--Sobic003G283400 Sobic004G344100 Sobic004G344100 Sobic005G104100--Sobic004G344100 Sobic005G104100--Sobic001G298800 Sobic005G104100--Sobic009G129700 Sobic005G104100--Sobic001G074000 Sobic001G221900 Sobic001G221900 Sobic005G104100--Sobic001G221900 Sobic005G104100--Sobic001G522300 Sobic003G072400 Sobic003G072400 Sobic005G104100--Sobic003G072400 Sobic010G181500 Sobic010G181500 Sobic005G104100--Sobic010G181500 Sobic005G156100--Sobic001G298800 Sobic001G207600 Sobic001G207600 Sobic005G156100--Sobic001G207600 Sobic003G045700 Sobic003G045700 Sobic005G156100--Sobic003G045700 Sobic005G156100--Sobic001G074000 Sobic009G099150 Sobic009G099150 Sobic005G156100--Sobic009G099150 Sobic005G156100--Sobic009G129700 Sobic002G341700 Sobic002G341700 Sobic005G156100--Sobic002G341700 Sobic010G231600 Sobic010G231600 Sobic005G156100--Sobic010G231600 Sobic005G032600 Sobic005G032600 Sobic005G156100--Sobic005G032600 Sobic008G038200--Sobic007G065300 Sobic002G098500 Sobic002G098500 Sobic008G038200--Sobic002G098500 Sobic008G038200--Sobic001G298800 Sobic003G096300 Sobic003G096300 Sobic008G038200--Sobic003G096300 Sobic001G518000 Sobic001G518000 Sobic008G038200--Sobic001G518000 Sobic006G241800 Sobic006G241800 Sobic008G038200--Sobic006G241800 Sobic003G177000 Sobic003G177000 Sobic008G038200--Sobic003G177000 Sobic010G135300 Sobic010G135300 Sobic008G038200--Sobic010G135300 Sobic008G038200--Sobic007G128100 Sobic007G065300--Sobic008G038200 Sobic007G032100 Sobic007G032100 Sobic007G065300--Sobic007G032100 Sobic007G165800 Sobic007G165800 Sobic007G065300--Sobic007G165800 Sobic007G065300--Sobic002G098500 Sobic001G434100 Sobic001G434100 Sobic007G065300--Sobic001G434100 Sobic010G020600 Sobic010G020600 Sobic007G065300--Sobic010G020600 Sobic007G065300--Sobic001G221900 Sobic009G235700 Sobic009G235700 Sobic007G065300--Sobic009G235700 Sobic007G065300--Sobic001G298800 Sobic001G074000--Sobic001G522300 Sobic001G074000--Sobic003G070600 Sobic001G074000--Sobic009G129700 Sobic007G160300 Sobic007G160300 Sobic001G074000--Sobic007G160300 Sobic001G074000--Sobic001G199400 Sobic001G493900 Sobic001G493900 Sobic001G074000--Sobic001G493900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic001G074000--Sobic010G020600 Sobic007G023100 Sobic007G023100 Sobic007G128100--Sobic007G023100 Sobic005G062600 Sobic005G062600 Sobic007G128100--Sobic005G062600 Sobic007G161600 Sobic007G161600 Sobic007G128100--Sobic007G161600 Sobic007G128100--Sobic008G038200 Sobic007G128100--Sobic001G298800 Sobic003G027800 Sobic003G027800 Sobic007G128100--Sobic003G027800 Sobic007G128100--Sobic003G019900 Sobic008G151600 Sobic008G151600 Sobic007G128100--Sobic008G151600 Sobic003G008800 Sobic003G008800 Sobic007G128100--Sobic003G008800 Sobic001G522300--Sobic001G074000 Sobic007G116800 Sobic007G116800 Sobic001G522300--Sobic007G116800 Sobic001G522300--Sobic001G493900 Sobic003G031700 Sobic003G031700 Sobic001G522300--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G522300--Sobic002G362700 Sobic001G286400 Sobic001G286400 Sobic001G522300--Sobic001G286400 Sobic001G522300--Sobic009G235700 Sobic001G522300--Sobic009G129700 Sobic004G283800 Sobic004G283800 Sobic001G522300--Sobic004G283800 Sobic006G093200--Sobic003G019900 Sobic010G092400 Sobic010G092400 Sobic006G093200--Sobic010G092400 Sobic008G070700 Sobic008G070700 Sobic006G093200--Sobic008G070700 Sobic010G024000 Sobic010G024000 Sobic006G093200--Sobic010G024000 Sobic006G274200 Sobic006G274200 Sobic006G093200--Sobic006G274200 Sobic003G032200 Sobic003G032200 Sobic006G093200--Sobic003G032200 Sobic010G269700 Sobic010G269700 Sobic006G093200--Sobic010G269700 Sobic006G093200--Sobic001G074000 Sobic010G222800 Sobic010G222800 Sobic006G093200--Sobic010G222800
Octagon: transcription factors


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