Gene annotation
Transcriptome id Sobic.005G156100.1
Synonym Sb05g021840, LACS2, LRD2
Functional annotation Long chain acyl CoA synthetase 2 LACS2 (At) (PubMedID : 27208977)
AMP-binding enzyme, putative, expressed
UniProt A0A1B6PSR5
Pfam PF00501
Panther DB PTHR24096 PTHR24096:SF134
NCBI CDD -
KEGG Orthology K01897; ACSL, long-chain acyl-CoA synthetase
Gene Ontology GO:0008152; metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT1G49430 : long-chain acyl-CoA synthetase 2
RAP-DB (Rice) LOC_Os11g35400.1 : AMP-binding enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a034112
Brachypodium KQJ88194 , KQJ88195
Barley HORVU5Hr1G099350.20 , HORVU5Hr1G099350.21 , HORVU5Hr1G099350.22 , HORVU5Hr1G099350.5 , HORVU5Hr1G099350.4 , HORVU5Hr1G099350.1 , HORVU5Hr1G099350.3 , HORVU5Hr1G099350.2 , HORVU5Hr1G099350.9 , HORVU5Hr1G099350.8 , HORVU5Hr1G099350.7 , HORVU5Hr1G099350.6 , HORVU5Hr1G099350.11 , HORVU5Hr1G099350.10 , HORVU5Hr1G099350.13 , HORVU5Hr1G099350.12 , HORVU5Hr1G099350.15 , HORVU5Hr1G099350.14 , HORVU5Hr1G099350.17 , HORVU5Hr1G099350.16 , HORVU5Hr1G099350.19 , HORVU5Hr1G099350.18
Wheat TraesCS5A02G411500 , TraesCS5B02G415100 , TraesCS5B02G415100 , TraesCS5A02G411500 , TraesCS5D02G420300
Populus -


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cDNA sequences
Sobic.005G156100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G298800 ternary complex factor MIP1, putative, expressed -
2 Sobic.001G207600 white-brown complex homolog protein 11, putative, expressed -
3 Sobic.003G045700 pleiotropic drug resistance protein, putative, expressed -
4 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
5 Sobic.009G099150 - -
6 Sobic.009G129700 serine/threonine-protein kinase, putative, expressed -
7 Sobic.002G341700 expressed protein -
8 Sobic.010G231600 cytochrome P450, putative, expressed -
9 Sobic.005G032600 glucan endo-1,3-beta-glucosidase-related, putative, expressed -
10 Sobic.004G246500 ATMAP70 protein, putative, expressed -
11 Sobic.006G211900 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
12 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
13 Sobic.007G018500 galactosyltransferase family protein, putative, expressed -
14 Sobic.010G020600 Receptor-like protein kinase 5 precursor(PubMedID : 28620409)@receptor-like protein kinase 5 precursor, putative, expressed -
15 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
16 Sobic.004G267600 OsFBT4 - F-box and tubby domain containing protein, expressed -
17 Sobic.003G019900 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.003G031700 protein kinase family protein, putative, expressed -
19 Sobic.004G283800 dehydration response related protein, putative, expressed -
20 Sobic.002G317700 BNR/Asp-box repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic005G156100 Sobic005G156100 Sobic001G298800 Sobic001G298800 Sobic005G156100--Sobic001G298800 Sobic001G207600 Sobic001G207600 Sobic005G156100--Sobic001G207600 Sobic003G045700 Sobic003G045700 Sobic005G156100--Sobic003G045700 Sobic001G074000 Sobic001G074000 Sobic005G156100--Sobic001G074000 Sobic009G099150 Sobic009G099150 Sobic005G156100--Sobic009G099150 Sobic009G129700 Sobic009G129700 Sobic005G156100--Sobic009G129700 Sobic002G341700 Sobic002G341700 Sobic005G156100--Sobic002G341700 Sobic010G231600 Sobic010G231600 Sobic005G156100--Sobic010G231600 Sobic005G032600 Sobic005G032600 Sobic005G156100--Sobic005G032600 Sobic001G298800--Sobic009G129700 Sobic005G104100 Sobic005G104100 Sobic001G298800--Sobic005G104100 Sobic001G298800--Sobic005G156100 Sobic008G038200 Sobic008G038200 Sobic001G298800--Sobic008G038200 Sobic007G065300 Sobic007G065300 Sobic001G298800--Sobic007G065300 Sobic001G298800--Sobic001G074000 Sobic007G128100 Sobic007G128100 Sobic001G298800--Sobic007G128100 Sobic001G522300 Sobic001G522300 Sobic001G298800--Sobic001G522300 Sobic006G093200 Sobic006G093200 Sobic001G298800--Sobic006G093200 Sobic001G207600--Sobic003G045700 Sobic004G283800 Sobic004G283800 Sobic001G207600--Sobic004G283800 Sobic004G274600 Sobic004G274600 Sobic001G207600--Sobic004G274600 Sobic009G174100 Sobic009G174100 Sobic001G207600--Sobic009G174100 Sobic001G207600--Sobic010G231600 Sobic010G020600 Sobic010G020600 Sobic001G207600--Sobic010G020600 Sobic001G207600--Sobic005G156100 Sobic008G097700 Sobic008G097700 Sobic001G207600--Sobic008G097700 Sobic003G339600 Sobic003G339600 Sobic001G207600--Sobic003G339600 Sobic003G045700--Sobic010G231600 Sobic003G045700--Sobic001G207600 Sobic003G045700--Sobic004G283800 Sobic003G045700--Sobic005G156100 Sobic009G031400 Sobic009G031400 Sobic003G045700--Sobic009G031400 Sobic001G441700 Sobic001G441700 Sobic003G045700--Sobic001G441700 Sobic006G125800 Sobic006G125800 Sobic003G045700--Sobic006G125800 Sobic001G023500 Sobic001G023500 Sobic003G045700--Sobic001G023500 Sobic009G173200 Sobic009G173200 Sobic003G045700--Sobic009G173200 Sobic001G074000--Sobic001G522300 Sobic003G070600 Sobic003G070600 Sobic001G074000--Sobic003G070600 Sobic001G074000--Sobic009G129700 Sobic007G160300 Sobic007G160300 Sobic001G074000--Sobic007G160300 Sobic001G199400 Sobic001G199400 Sobic001G074000--Sobic001G199400 Sobic001G493900 Sobic001G493900 Sobic001G074000--Sobic001G493900 Sobic003G019900 Sobic003G019900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic001G074000--Sobic010G020600 Sobic006G211900 Sobic006G211900 Sobic009G099150--Sobic006G211900 Sobic003G031700 Sobic003G031700 Sobic009G099150--Sobic003G031700 Sobic009G099150--Sobic001G522300 Sobic007G087800 Sobic007G087800 Sobic009G099150--Sobic007G087800 Sobic010G092400 Sobic010G092400 Sobic009G099150--Sobic010G092400 Sobic002G317700 Sobic002G317700 Sobic009G099150--Sobic002G317700 Sobic010G023400 Sobic010G023400 Sobic009G099150--Sobic010G023400 Sobic007G116800 Sobic007G116800 Sobic009G099150--Sobic007G116800 Sobic004G234500 Sobic004G234500 Sobic009G099150--Sobic004G234500 Sobic009G129700--Sobic001G074000 Sobic009G129700--Sobic001G298800 Sobic009G129700--Sobic001G522300 Sobic009G129700--Sobic003G019900 Sobic009G129700--Sobic005G104100 Sobic009G129700--Sobic003G070600 Sobic003G283400 Sobic003G283400 Sobic009G129700--Sobic003G283400 Sobic009G129700--Sobic001G199400 Sobic003G360700 Sobic003G360700 Sobic009G129700--Sobic003G360700 Sobic002G341700--Sobic003G283400 Sobic002G341700--Sobic005G156100 Sobic007G018500 Sobic007G018500 Sobic002G341700--Sobic007G018500 Sobic002G341700--Sobic009G099150 Sobic006G177000 Sobic006G177000 Sobic002G341700--Sobic006G177000 Sobic002G341700--Sobic006G093200 Sobic002G341700--Sobic009G129700 Sobic002G341700--Sobic001G522300 Sobic002G341700--Sobic001G074000 Sobic010G231600--Sobic003G045700 Sobic010G231600--Sobic001G207600 Sobic006G014400 Sobic006G014400 Sobic010G231600--Sobic006G014400 Sobic010G231600--Sobic001G023500 Sobic010G231600--Sobic004G283800 Sobic010G231600--Sobic001G441700 Sobic010G231600--Sobic009G031400 Sobic010G231600--Sobic009G173200 Sobic001G266200 Sobic001G266200 Sobic010G231600--Sobic001G266200 Sobic002G027600 Sobic002G027600 Sobic005G032600--Sobic002G027600 Sobic004G267600 Sobic004G267600 Sobic005G032600--Sobic004G267600 Sobic001G079900 Sobic001G079900 Sobic005G032600--Sobic001G079900 Sobic005G032600--Sobic003G019900 Sobic006G272800 Sobic006G272800 Sobic005G032600--Sobic006G272800 Sobic005G032600--Sobic001G493900 Sobic008G151600 Sobic008G151600 Sobic005G032600--Sobic008G151600 Sobic003G351900 Sobic003G351900 Sobic005G032600--Sobic003G351900 Sobic007G032100 Sobic007G032100 Sobic005G032600--Sobic007G032100
Octagon: transcription factors


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