Gene annotation
Transcriptome id Sobic.002G341700.1
Synonym Sb02g036580
Functional annotation expressed protein
UniProt C5XBM5
Pfam -
Panther DB PTHR36733
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G20870 : cell wall protein precursor, putative
RAP-DB (Rice) LOC_Os07g37850.1 : expressed protein
MaizeGDB (Corn) Zm00025a014935 , Zm00025a048412
Brachypodium -
Barley HORVU6Hr1G077270.1 , HORVU2Hr1G039930.1 , HORVU6Hr1G077270.2 , HORVU6Hr1G076450.1
Wheat TraesCS1D02G003600
Populus -


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cDNA sequences
Sobic.002G341700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G283400 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.005G156100 Long chain acyl CoA synthetase 2 LACS2 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
3 Sobic.007G018500 galactosyltransferase family protein, putative, expressed -
4 Sobic.009G099150 - -
5 Sobic.006G177000 cytochrome P450, putative, expressed K15398: fatty acid omega-hydroxylase
6 Sobic.006G093200 PHD finger protein, putative, expressed -
7 Sobic.009G129700 serine/threonine-protein kinase, putative, expressed -
8 Sobic.001G522300 leucine-rich repeat transmembrane protein kinase, putative, expressed -
9 Sobic.001G074000 receptor protein kinase CLAVATA1 precursor, putative, expressed -
10 Sobic.001G298800 ternary complex factor MIP1, putative, expressed -
11 Sobic.004G344100 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.006G111100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@pathogenesis-related Bet v I family protein, putative, expressed -
13 Sobic.010G156100 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.006G110700 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.005G104100 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
17 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
18 Sobic.006G235600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@beta-D-xylosidase, putative, expressed K15920: xylan 1,4-beta-xylosidase
19 Sobic.002G428000 expressed protein -
20 Sobic.004G343700 serine/threonine-protein kinase, putative, expressed -


Gene co-expression network
sample Sobic002G341700 Sobic002G341700 Sobic003G283400 Sobic003G283400 Sobic002G341700--Sobic003G283400 Sobic005G156100 Sobic005G156100 Sobic002G341700--Sobic005G156100 Sobic007G018500 Sobic007G018500 Sobic002G341700--Sobic007G018500 Sobic009G099150 Sobic009G099150 Sobic002G341700--Sobic009G099150 Sobic006G177000 Sobic006G177000 Sobic002G341700--Sobic006G177000 Sobic006G093200 Sobic006G093200 Sobic002G341700--Sobic006G093200 Sobic009G129700 Sobic009G129700 Sobic002G341700--Sobic009G129700 Sobic001G522300 Sobic001G522300 Sobic002G341700--Sobic001G522300 Sobic001G074000 Sobic001G074000 Sobic002G341700--Sobic001G074000 Sobic003G365800 Sobic003G365800 Sobic003G283400--Sobic003G365800 Sobic005G104100 Sobic005G104100 Sobic003G283400--Sobic005G104100 Sobic003G142100 Sobic003G142100 Sobic003G283400--Sobic003G142100 Sobic010G156100 Sobic010G156100 Sobic003G283400--Sobic010G156100 Sobic003G308100 Sobic003G308100 Sobic003G283400--Sobic003G308100 Sobic001G271600 Sobic001G271600 Sobic003G283400--Sobic001G271600 Sobic003G283400--Sobic009G129700 Sobic004G344100 Sobic004G344100 Sobic003G283400--Sobic004G344100 Sobic003G283400--Sobic002G341700 Sobic001G298800 Sobic001G298800 Sobic005G156100--Sobic001G298800 Sobic001G207600 Sobic001G207600 Sobic005G156100--Sobic001G207600 Sobic003G045700 Sobic003G045700 Sobic005G156100--Sobic003G045700 Sobic005G156100--Sobic001G074000 Sobic005G156100--Sobic009G099150 Sobic005G156100--Sobic009G129700 Sobic005G156100--Sobic002G341700 Sobic010G231600 Sobic010G231600 Sobic005G156100--Sobic010G231600 Sobic005G032600 Sobic005G032600 Sobic005G156100--Sobic005G032600 Sobic007G018500--Sobic002G341700 Sobic001G033300 Sobic001G033300 Sobic007G018500--Sobic001G033300 Sobic007G084200 Sobic007G084200 Sobic007G018500--Sobic007G084200 Sobic001G201000 Sobic001G201000 Sobic007G018500--Sobic001G201000 Sobic007G018500--Sobic005G156100 Sobic008G052000 Sobic008G052000 Sobic007G018500--Sobic008G052000 Sobic006G236800 Sobic006G236800 Sobic007G018500--Sobic006G236800 Sobic007G018500--Sobic009G099150 Sobic001G487200 Sobic001G487200 Sobic007G018500--Sobic001G487200 Sobic006G211900 Sobic006G211900 Sobic009G099150--Sobic006G211900 Sobic003G031700 Sobic003G031700 Sobic009G099150--Sobic003G031700 Sobic009G099150--Sobic001G522300 Sobic007G087800 Sobic007G087800 Sobic009G099150--Sobic007G087800 Sobic010G092400 Sobic010G092400 Sobic009G099150--Sobic010G092400 Sobic002G317700 Sobic002G317700 Sobic009G099150--Sobic002G317700 Sobic010G023400 Sobic010G023400 Sobic009G099150--Sobic010G023400 Sobic007G116800 Sobic007G116800 Sobic009G099150--Sobic007G116800 Sobic004G234500 Sobic004G234500 Sobic009G099150--Sobic004G234500 Sobic006G177000--Sobic002G341700 Sobic001G273100 Sobic001G273100 Sobic006G177000--Sobic001G273100 Sobic006G177000--Sobic005G156100 Sobic006G110700 Sobic006G110700 Sobic006G177000--Sobic006G110700 Sobic003G078400 Sobic003G078400 Sobic006G177000--Sobic003G078400 Sobic006G122300 Sobic006G122300 Sobic006G177000--Sobic006G122300 Sobic001G534300 Sobic001G534300 Sobic006G177000--Sobic001G534300 Sobic006G177000--Sobic007G018500 Sobic006G160200 Sobic006G160200 Sobic006G177000--Sobic006G160200 Sobic003G019900 Sobic003G019900 Sobic006G093200--Sobic003G019900 Sobic006G093200--Sobic010G092400 Sobic008G070700 Sobic008G070700 Sobic006G093200--Sobic008G070700 Sobic010G024000 Sobic010G024000 Sobic006G093200--Sobic010G024000 Sobic006G274200 Sobic006G274200 Sobic006G093200--Sobic006G274200 Sobic003G032200 Sobic003G032200 Sobic006G093200--Sobic003G032200 Sobic010G269700 Sobic010G269700 Sobic006G093200--Sobic010G269700 Sobic006G093200--Sobic001G074000 Sobic010G222800 Sobic010G222800 Sobic006G093200--Sobic010G222800 Sobic009G129700--Sobic001G074000 Sobic009G129700--Sobic001G298800 Sobic009G129700--Sobic001G522300 Sobic009G129700--Sobic003G019900 Sobic009G129700--Sobic005G104100 Sobic003G070600 Sobic003G070600 Sobic009G129700--Sobic003G070600 Sobic009G129700--Sobic003G283400 Sobic001G199400 Sobic001G199400 Sobic009G129700--Sobic001G199400 Sobic003G360700 Sobic003G360700 Sobic009G129700--Sobic003G360700 Sobic001G522300--Sobic001G074000 Sobic001G522300--Sobic007G116800 Sobic001G493900 Sobic001G493900 Sobic001G522300--Sobic001G493900 Sobic001G522300--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G522300--Sobic002G362700 Sobic001G286400 Sobic001G286400 Sobic001G522300--Sobic001G286400 Sobic009G235700 Sobic009G235700 Sobic001G522300--Sobic009G235700 Sobic001G522300--Sobic009G129700 Sobic004G283800 Sobic004G283800 Sobic001G522300--Sobic004G283800 Sobic001G074000--Sobic001G522300 Sobic001G074000--Sobic003G070600 Sobic001G074000--Sobic009G129700 Sobic007G160300 Sobic007G160300 Sobic001G074000--Sobic007G160300 Sobic001G074000--Sobic001G199400 Sobic001G074000--Sobic001G493900 Sobic001G074000--Sobic003G019900 Sobic010G014700 Sobic010G014700 Sobic001G074000--Sobic010G014700 Sobic010G020600 Sobic010G020600 Sobic001G074000--Sobic010G020600
Octagon: transcription factors


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