Gene annotation
Transcriptome id Sobic.002G428000.1,Sobic.002G428000.3,Sobic.002G428000.2
Synonym WAVE4, DIS3, ITB1, SCAR2, ATSCAR2
Functional annotation expressed protein
UniProt A0A1B6QGH2 , A0A1W0W826 , A0A1W0W834
Pfam -
Panther DB PTHR12902
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005856; cytoskeleton GO:0005856cytoskeleton


Orthologs (automatic annotation)
TAIR AT1G29170 : SCAR family protein,SCAR homolog 2
RAP-DB (Rice) LOC_Os03g18710.1,LOC_Os07g49140.1 : expressed protein
MaizeGDB (Corn) Zm00025a049246
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G389600 expressed protein -
2 Sobic.002G403000 eukaryotic aspartyl protease domain containing protein, expressed -
3 Sobic.003G283400 GDSL-like lipase/acylhydrolase, putative, expressed -
4 Sobic.009G151100 serine/threonine-protein kinase, putative, expressed -
5 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
6 Sobic.007G142300 expressed protein -
7 Sobic.010G165100 expressed protein -
8 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
9 Sobic.004G344100 GDSL-like lipase/acylhydrolase, putative, expressed -
10 Sobic.009G226200 expressed protein -
11 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
12 Sobic.003G429401 - -
13 Sobic.005G104100 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.002G341700 expressed protein -
15 Sobic.008G110400 haemolysin-III, putative, expressed K07297: adiponectin receptor
16 Sobic.002G246000 expressed protein -
17 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
18 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
19 Sobic.002G142500 expressed protein -
20 Sobic.002G045200 protein kinase, putative, expressed -


Gene co-expression network
sample Sobic002G428000 Sobic002G428000 Sobic001G389600 Sobic001G389600 Sobic002G428000--Sobic001G389600 Sobic002G403000 Sobic002G403000 Sobic002G428000--Sobic002G403000 Sobic003G283400 Sobic003G283400 Sobic002G428000--Sobic003G283400 Sobic009G151100 Sobic009G151100 Sobic002G428000--Sobic009G151100 Sobic001G478100 Sobic001G478100 Sobic002G428000--Sobic001G478100 Sobic007G142300 Sobic007G142300 Sobic002G428000--Sobic007G142300 Sobic010G165100 Sobic010G165100 Sobic002G428000--Sobic010G165100 Sobic009G235700 Sobic009G235700 Sobic002G428000--Sobic009G235700 Sobic004G344100 Sobic004G344100 Sobic002G428000--Sobic004G344100 Sobic001G389600--Sobic002G403000 Sobic001G389600--Sobic010G165100 Sobic001G389600--Sobic001G478100 Sobic002G045200 Sobic002G045200 Sobic001G389600--Sobic002G045200 Sobic010G107200 Sobic010G107200 Sobic001G389600--Sobic010G107200 Sobic002G142500 Sobic002G142500 Sobic001G389600--Sobic002G142500 Sobic002G246000 Sobic002G246000 Sobic001G389600--Sobic002G246000 Sobic001G389600--Sobic002G428000 Sobic006G032800 Sobic006G032800 Sobic001G389600--Sobic006G032800 Sobic002G403000--Sobic001G389600 Sobic002G403000--Sobic001G478100 Sobic002G403000--Sobic002G428000 Sobic002G403000--Sobic010G165100 Sobic002G403000--Sobic002G045200 Sobic008G110400 Sobic008G110400 Sobic002G403000--Sobic008G110400 Sobic002G403000--Sobic002G246000 Sobic003G277200 Sobic003G277200 Sobic002G403000--Sobic003G277200 Sobic002G403000--Sobic010G107200 Sobic003G365800 Sobic003G365800 Sobic003G283400--Sobic003G365800 Sobic005G104100 Sobic005G104100 Sobic003G283400--Sobic005G104100 Sobic003G142100 Sobic003G142100 Sobic003G283400--Sobic003G142100 Sobic010G156100 Sobic010G156100 Sobic003G283400--Sobic010G156100 Sobic003G308100 Sobic003G308100 Sobic003G283400--Sobic003G308100 Sobic001G271600 Sobic001G271600 Sobic003G283400--Sobic001G271600 Sobic009G129700 Sobic009G129700 Sobic003G283400--Sobic009G129700 Sobic003G283400--Sobic004G344100 Sobic002G341700 Sobic002G341700 Sobic003G283400--Sobic002G341700 Sobic009G151100--Sobic003G365800 Sobic009G151100--Sobic010G156100 Sobic009G151100--Sobic003G283400 Sobic009G151100--Sobic003G308100 Sobic009G216300 Sobic009G216300 Sobic009G151100--Sobic009G216300 Sobic009G151100--Sobic002G428000 Sobic004G000700 Sobic004G000700 Sobic009G151100--Sobic004G000700 Sobic003G078300 Sobic003G078300 Sobic009G151100--Sobic003G078300 Sobic008G075200 Sobic008G075200 Sobic009G151100--Sobic008G075200 Sobic001G478100--Sobic001G389600 Sobic006G233600 Sobic006G233600 Sobic001G478100--Sobic006G233600 Sobic001G478100--Sobic010G107200 Sobic001G478100--Sobic002G403000 Sobic010G143300 Sobic010G143300 Sobic001G478100--Sobic010G143300 Sobic001G478100--Sobic006G032800 Sobic005G196500 Sobic005G196500 Sobic001G478100--Sobic005G196500 Sobic001G478100--Sobic007G142300 Sobic001G478100--Sobic010G165100 Sobic005G147800 Sobic005G147800 Sobic007G142300--Sobic005G147800 Sobic007G142300--Sobic010G107200 Sobic002G397400 Sobic002G397400 Sobic007G142300--Sobic002G397400 Sobic005G209900 Sobic005G209900 Sobic007G142300--Sobic005G209900 Sobic001G265900 Sobic001G265900 Sobic007G142300--Sobic001G265900 Sobic007G142300--Sobic005G196500 Sobic007G142300--Sobic006G233600 Sobic010G124200 Sobic010G124200 Sobic007G142300--Sobic010G124200 Sobic007G142300--Sobic006G032800 Sobic010G165100--Sobic002G246000 Sobic010G165100--Sobic001G389600 Sobic010G165100--Sobic002G142500 Sobic010G165100--Sobic002G045200 Sobic006G274866 Sobic006G274866 Sobic010G165100--Sobic006G274866 Sobic010G165100--Sobic002G403000 Sobic010G165100--Sobic006G032800 Sobic002G311000 Sobic002G311000 Sobic010G165100--Sobic002G311000 Sobic004G243800 Sobic004G243800 Sobic010G165100--Sobic004G243800 Sobic006G125800 Sobic006G125800 Sobic009G235700--Sobic006G125800 Sobic010G020600 Sobic010G020600 Sobic009G235700--Sobic010G020600 Sobic001G221900 Sobic001G221900 Sobic009G235700--Sobic001G221900 Sobic004G248100 Sobic004G248100 Sobic009G235700--Sobic004G248100 Sobic003G339600 Sobic003G339600 Sobic009G235700--Sobic003G339600 Sobic001G522300 Sobic001G522300 Sobic009G235700--Sobic001G522300 Sobic007G165800 Sobic007G165800 Sobic009G235700--Sobic007G165800 Sobic004G283800 Sobic004G283800 Sobic009G235700--Sobic004G283800 Sobic003G360700 Sobic003G360700 Sobic009G235700--Sobic003G360700 Sobic004G344100--Sobic005G104100 Sobic004G344100--Sobic003G283400 Sobic001G074000 Sobic001G074000 Sobic004G344100--Sobic001G074000 Sobic004G344100--Sobic002G341700 Sobic004G344100--Sobic001G271600 Sobic003G070600 Sobic003G070600 Sobic004G344100--Sobic003G070600 Sobic004G344100--Sobic002G428000 Sobic009G226200 Sobic009G226200 Sobic004G344100--Sobic009G226200 Sobic004G344100--Sobic003G365800
Octagon: transcription factors


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