Gene annotation
Transcriptome id Sobic.003G429401.1
Synonym -
Functional annotation -
UniProt A0A1W0W1F3
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g72470.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G428000 expressed protein -
2 Sobic.008G110400 haemolysin-III, putative, expressed K07297: adiponectin receptor
3 Sobic.003G287000 BURP domain containing protein, expressed -
4 Sobic.008G031700 RING-H2 finger protein, putative, expressed -
5 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
6 Sobic.010G165100 expressed protein -
7 Sobic.002G278800 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
8 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
9 Sobic.002G278700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
10 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
12 Sobic.004G044300 plant protein of unknown function domain containing protein, expressed -
13 Sobic.007G142300 expressed protein -
14 Sobic.010G012400 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
15 Sobic.009G128800 expressed protein -
16 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
17 Sobic.003G173700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
18 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.001G332966 - -
20 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -


Gene co-expression network
sample Sobic003G429401 Sobic003G429401 Sobic002G428000 Sobic002G428000 Sobic003G429401--Sobic002G428000 Sobic008G110400 Sobic008G110400 Sobic003G429401--Sobic008G110400 Sobic003G287000 Sobic003G287000 Sobic003G429401--Sobic003G287000 Sobic008G031700 Sobic008G031700 Sobic003G429401--Sobic008G031700 Sobic007G195300 Sobic007G195300 Sobic003G429401--Sobic007G195300 Sobic010G165100 Sobic010G165100 Sobic003G429401--Sobic010G165100 Sobic002G278800 Sobic002G278800 Sobic003G429401--Sobic002G278800 Sobic009G216300 Sobic009G216300 Sobic003G429401--Sobic009G216300 Sobic002G278700 Sobic002G278700 Sobic003G429401--Sobic002G278700 Sobic001G389600 Sobic001G389600 Sobic002G428000--Sobic001G389600 Sobic002G403000 Sobic002G403000 Sobic002G428000--Sobic002G403000 Sobic003G283400 Sobic003G283400 Sobic002G428000--Sobic003G283400 Sobic009G151100 Sobic009G151100 Sobic002G428000--Sobic009G151100 Sobic001G478100 Sobic001G478100 Sobic002G428000--Sobic001G478100 Sobic007G142300 Sobic007G142300 Sobic002G428000--Sobic007G142300 Sobic002G428000--Sobic010G165100 Sobic009G235700 Sobic009G235700 Sobic002G428000--Sobic009G235700 Sobic004G344100 Sobic004G344100 Sobic002G428000--Sobic004G344100 Sobic006G219100 Sobic006G219100 Sobic008G110400--Sobic006G219100 Sobic002G382500 Sobic002G382500 Sobic008G110400--Sobic002G382500 Sobic002G068400 Sobic002G068400 Sobic008G110400--Sobic002G068400 Sobic003G041801 Sobic003G041801 Sobic008G110400--Sobic003G041801 Sobic008G110400--Sobic002G403000 Sobic006G015900 Sobic006G015900 Sobic008G110400--Sobic006G015900 Sobic010G027700 Sobic010G027700 Sobic008G110400--Sobic010G027700 Sobic004G215000 Sobic004G215000 Sobic008G110400--Sobic004G215000 Sobic001G179400 Sobic001G179400 Sobic008G110400--Sobic001G179400 Sobic008G030700 Sobic008G030700 Sobic003G287000--Sobic008G030700 Sobic001G535600 Sobic001G535600 Sobic003G287000--Sobic001G535600 Sobic005G190800 Sobic005G190800 Sobic003G287000--Sobic005G190800 Sobic001G363700 Sobic001G363700 Sobic003G287000--Sobic001G363700 Sobic002G128600 Sobic002G128600 Sobic003G287000--Sobic002G128600 Sobic006G175700 Sobic006G175700 Sobic003G287000--Sobic006G175700 Sobic001G249500 Sobic001G249500 Sobic003G287000--Sobic001G249500 Sobic005G036500 Sobic005G036500 Sobic003G287000--Sobic005G036500 Sobic003G007800 Sobic003G007800 Sobic003G287000--Sobic003G007800 Sobic005G201900 Sobic005G201900 Sobic008G031700--Sobic005G201900 Sobic008G031700--Sobic003G429401 Sobic008G031700--Sobic006G015900 Sobic008G031700--Sobic004G215000 Sobic002G158000 Sobic002G158000 Sobic008G031700--Sobic002G158000 Sobic008G031700--Sobic008G110400 Sobic004G227900 Sobic004G227900 Sobic008G031700--Sobic004G227900 Sobic008G031700--Sobic006G219100 Sobic005G089700 Sobic005G089700 Sobic008G031700--Sobic005G089700 Sobic003G131800 Sobic003G131800 Sobic007G195300--Sobic003G131800 Sobic007G195300--Sobic008G030700 Sobic007G195300--Sobic002G278700 Sobic007G195300--Sobic002G278800 Sobic010G012400 Sobic010G012400 Sobic007G195300--Sobic010G012400 Sobic007G195300--Sobic001G249500 Sobic007G195300--Sobic006G175700 Sobic007G195300--Sobic005G190800 Sobic004G157550 Sobic004G157550 Sobic007G195300--Sobic004G157550 Sobic002G246000 Sobic002G246000 Sobic010G165100--Sobic002G246000 Sobic010G165100--Sobic001G389600 Sobic002G142500 Sobic002G142500 Sobic010G165100--Sobic002G142500 Sobic002G045200 Sobic002G045200 Sobic010G165100--Sobic002G045200 Sobic006G274866 Sobic006G274866 Sobic010G165100--Sobic006G274866 Sobic010G165100--Sobic002G403000 Sobic006G032800 Sobic006G032800 Sobic010G165100--Sobic006G032800 Sobic002G311000 Sobic002G311000 Sobic010G165100--Sobic002G311000 Sobic004G243800 Sobic004G243800 Sobic010G165100--Sobic004G243800 Sobic002G278800--Sobic002G278700 Sobic003G173700 Sobic003G173700 Sobic002G278800--Sobic003G173700 Sobic001G332966 Sobic001G332966 Sobic002G278800--Sobic001G332966 Sobic002G278800--Sobic003G131800 Sobic002G278800--Sobic008G030700 Sobic002G278800--Sobic006G175700 Sobic002G278800--Sobic010G012400 Sobic001G338000 Sobic001G338000 Sobic002G278800--Sobic001G338000 Sobic009G136500 Sobic009G136500 Sobic002G278800--Sobic009G136500 Sobic009G216300--Sobic002G142500 Sobic001G518000 Sobic001G518000 Sobic009G216300--Sobic001G518000 Sobic009G128800 Sobic009G128800 Sobic009G216300--Sobic009G128800 Sobic009G216300--Sobic009G235700 Sobic009G216300--Sobic010G165100 Sobic009G216300--Sobic009G151100 Sobic010G211800 Sobic010G211800 Sobic009G216300--Sobic010G211800 Sobic001G522300 Sobic001G522300 Sobic009G216300--Sobic001G522300 Sobic009G216300--Sobic002G045200 Sobic002G278700--Sobic002G278800 Sobic002G278700--Sobic010G012400 Sobic002G278700--Sobic003G131800 Sobic002G278700--Sobic008G030700 Sobic002G278700--Sobic003G173700 Sobic002G278700--Sobic001G332966 Sobic002G278700--Sobic006G175700 Sobic002G278700--Sobic009G136500 Sobic002G278700--Sobic001G338000
Octagon: transcription factors


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