Gene annotation
Transcriptome id Sobic.004G044300.1
Synonym
Functional annotation plant protein of unknown function domain containing protein, expressed
UniProt C5XUR9
Pfam PF03140
Panther DB PTHR31549 PTHR31549:SF22
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50170 : Plant protein of unknown function (DUF247)
RAP-DB (Rice) LOC_Os06g33350.1 : plant protein of unknown function domain containing protein, expressed
MaizeGDB (Corn) Zm00025a032644
Brachypodium KQJ98780 , PNT68338 , PNT68337 , KQJ98779
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G287000 BURP domain containing protein, expressed -
2 Sobic.008G058500 cytochrome P450, putative, expressed -
3 Sobic.010G012400 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
4 Sobic.002G278700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
5 Sobic.003G429401 - -
6 Sobic.002G278800 ribonuclease T2 family domain containing protein, expressed K01166: ribonuclease T2
7 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
9 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
10 Sobic.003G173700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fatty acid hydroxylase, putative, expressed K14423: plant 4,4-dimethylsterol C-4alpha-methyl-monooxygenase
11 Sobic.001G338000 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
12 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
13 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
14 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
15 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.009G216300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polygalacturonase, putative, expressed -
17 Sobic.001G068600 app1, putative, expressed -
18 Sobic.006G227000 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
19 Sobic.001G332966 - -
20 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -


Gene co-expression network
sample Sobic004G044300 Sobic004G044300 Sobic003G287000 Sobic003G287000 Sobic004G044300--Sobic003G287000 Sobic008G058500 Sobic008G058500 Sobic004G044300--Sobic008G058500 Sobic010G012400 Sobic010G012400 Sobic004G044300--Sobic010G012400 Sobic002G278700 Sobic002G278700 Sobic004G044300--Sobic002G278700 Sobic003G429401 Sobic003G429401 Sobic004G044300--Sobic003G429401 Sobic002G278800 Sobic002G278800 Sobic004G044300--Sobic002G278800 Sobic008G030700 Sobic008G030700 Sobic004G044300--Sobic008G030700 Sobic006G175700 Sobic006G175700 Sobic004G044300--Sobic006G175700 Sobic007G195300 Sobic007G195300 Sobic004G044300--Sobic007G195300 Sobic003G287000--Sobic008G030700 Sobic001G535600 Sobic001G535600 Sobic003G287000--Sobic001G535600 Sobic005G190800 Sobic005G190800 Sobic003G287000--Sobic005G190800 Sobic001G363700 Sobic001G363700 Sobic003G287000--Sobic001G363700 Sobic002G128600 Sobic002G128600 Sobic003G287000--Sobic002G128600 Sobic003G287000--Sobic006G175700 Sobic001G249500 Sobic001G249500 Sobic003G287000--Sobic001G249500 Sobic005G036500 Sobic005G036500 Sobic003G287000--Sobic005G036500 Sobic003G007800 Sobic003G007800 Sobic003G287000--Sobic003G007800 Sobic009G010900 Sobic009G010900 Sobic008G058500--Sobic009G010900 Sobic007G222600 Sobic007G222600 Sobic008G058500--Sobic007G222600 Sobic001G275600 Sobic001G275600 Sobic008G058500--Sobic001G275600 Sobic001G307300 Sobic001G307300 Sobic008G058500--Sobic001G307300 Sobic001G379300 Sobic001G379300 Sobic008G058500--Sobic001G379300 Sobic009G119400 Sobic009G119400 Sobic008G058500--Sobic009G119400 Sobic002G209800 Sobic002G209800 Sobic008G058500--Sobic002G209800 Sobic002G141100 Sobic002G141100 Sobic008G058500--Sobic002G141100 Sobic006G238100 Sobic006G238100 Sobic008G058500--Sobic006G238100 Sobic010G012400--Sobic002G278700 Sobic010G012400--Sobic002G278800 Sobic010G012400--Sobic008G030700 Sobic003G131800 Sobic003G131800 Sobic010G012400--Sobic003G131800 Sobic004G157550 Sobic004G157550 Sobic010G012400--Sobic004G157550 Sobic009G206300 Sobic009G206300 Sobic010G012400--Sobic009G206300 Sobic010G012400--Sobic007G195300 Sobic002G278700--Sobic002G278800 Sobic002G278700--Sobic010G012400 Sobic002G278700--Sobic003G131800 Sobic002G278700--Sobic008G030700 Sobic003G173700 Sobic003G173700 Sobic002G278700--Sobic003G173700 Sobic001G332966 Sobic001G332966 Sobic002G278700--Sobic001G332966 Sobic002G278700--Sobic006G175700 Sobic009G136500 Sobic009G136500 Sobic002G278700--Sobic009G136500 Sobic001G338000 Sobic001G338000 Sobic002G278700--Sobic001G338000 Sobic002G428000 Sobic002G428000 Sobic003G429401--Sobic002G428000 Sobic008G110400 Sobic008G110400 Sobic003G429401--Sobic008G110400 Sobic003G429401--Sobic003G287000 Sobic008G031700 Sobic008G031700 Sobic003G429401--Sobic008G031700 Sobic003G429401--Sobic007G195300 Sobic010G165100 Sobic010G165100 Sobic003G429401--Sobic010G165100 Sobic003G429401--Sobic002G278800 Sobic009G216300 Sobic009G216300 Sobic003G429401--Sobic009G216300 Sobic003G429401--Sobic002G278700 Sobic002G278800--Sobic002G278700 Sobic002G278800--Sobic003G173700 Sobic002G278800--Sobic001G332966 Sobic002G278800--Sobic003G131800 Sobic002G278800--Sobic008G030700 Sobic002G278800--Sobic006G175700 Sobic002G278800--Sobic010G012400 Sobic002G278800--Sobic001G338000 Sobic002G278800--Sobic009G136500 Sobic008G030700--Sobic006G175700 Sobic008G030700--Sobic002G278800 Sobic008G030700--Sobic002G278700 Sobic008G030700--Sobic001G249500 Sobic008G030700--Sobic003G131800 Sobic008G030700--Sobic010G012400 Sobic008G030700--Sobic005G190800 Sobic008G030700--Sobic001G535600 Sobic008G030700--Sobic003G173700 Sobic006G175700--Sobic005G190800 Sobic006G175700--Sobic008G030700 Sobic006G175700--Sobic002G278800 Sobic006G175700--Sobic003G007800 Sobic006G175700--Sobic001G249500 Sobic006G175700--Sobic001G338000 Sobic006G175700--Sobic002G128600 Sobic006G175700--Sobic003G131800 Sobic006G175700--Sobic002G278700 Sobic007G195300--Sobic003G131800 Sobic007G195300--Sobic008G030700 Sobic007G195300--Sobic002G278700 Sobic007G195300--Sobic002G278800 Sobic007G195300--Sobic010G012400 Sobic007G195300--Sobic001G249500 Sobic007G195300--Sobic006G175700 Sobic007G195300--Sobic005G190800 Sobic007G195300--Sobic004G157550
Octagon: transcription factors


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