Gene annotation
Transcriptome id Sobic.003G007800.1
Synonym Sb03g000850
Functional annotation phosphorylase domain containing protein, putative, expressed
UniProt C5XJN6
Pfam PF01048
Panther DB PTHR21234 PTHR21234:SF32
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009116; nucleoside metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT4G28940 : Phosphorylase superfamily protein
RAP-DB (Rice) LOC_Os01g12940.1 : phosphorylase domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a022827
Brachypodium KQK03420
Barley HORVU3Hr1G052510.1 , HORVU3Hr1G052490.1 , HORVU3Hr1G052490.3
Wheat TraesCS3A02G155000 , TraesCS3B02G181300 , TraesCS3D02G162500
Populus -


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cDNA sequences
Sobic.003G007800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
3 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
4 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
5 Sobic.004G328900 expressed protein -
6 Sobic.003G317800 lysM domain containing protein, putative -
7 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
8 Sobic.005G029400 strictosidine synthase, putative, expressed -
9 Sobic.004G038300 cycloartenol synthase, putative, expressed -
10 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.009G070600 HAD superfamily phosphatase, putative, expressed -
12 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -
13 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
14 Sobic.003G068300 transferase family protein, putative, expressed -
15 Sobic.007G069500 expressed protein -
16 Sobic.006G227000 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
17 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.001G068600 app1, putative, expressed -
20 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I


Gene co-expression network
sample Sobic003G007800 Sobic003G007800 Sobic008G189500 Sobic008G189500 Sobic003G007800--Sobic008G189500 Sobic001G255300 Sobic001G255300 Sobic003G007800--Sobic001G255300 Sobic005G190800 Sobic005G190800 Sobic003G007800--Sobic005G190800 Sobic006G175700 Sobic006G175700 Sobic003G007800--Sobic006G175700 Sobic004G328900 Sobic004G328900 Sobic003G007800--Sobic004G328900 Sobic003G317800 Sobic003G317800 Sobic003G007800--Sobic003G317800 Sobic002G128600 Sobic002G128600 Sobic003G007800--Sobic002G128600 Sobic005G029400 Sobic005G029400 Sobic003G007800--Sobic005G029400 Sobic004G038300 Sobic004G038300 Sobic003G007800--Sobic004G038300 Sobic008G189500--Sobic003G007800 Sobic001G472000 Sobic001G472000 Sobic008G189500--Sobic001G472000 Sobic008G189500--Sobic001G255300 Sobic008G189500--Sobic005G029400 Sobic009G070600 Sobic009G070600 Sobic008G189500--Sobic009G070600 Sobic008G189500--Sobic004G328900 Sobic008G189500--Sobic003G317800 Sobic001G379300 Sobic001G379300 Sobic008G189500--Sobic001G379300 Sobic008G189500--Sobic002G128600 Sobic001G255300--Sobic001G379300 Sobic001G255300--Sobic004G328900 Sobic006G238100 Sobic006G238100 Sobic001G255300--Sobic006G238100 Sobic001G255300--Sobic003G317800 Sobic008G163200 Sobic008G163200 Sobic001G255300--Sobic008G163200 Sobic002G416950 Sobic002G416950 Sobic001G255300--Sobic002G416950 Sobic001G255300--Sobic003G007800 Sobic001G255300--Sobic008G189500 Sobic003G068300 Sobic003G068300 Sobic001G255300--Sobic003G068300 Sobic005G190800--Sobic006G175700 Sobic005G190800--Sobic002G128600 Sobic005G190800--Sobic003G007800 Sobic006G227000 Sobic006G227000 Sobic005G190800--Sobic006G227000 Sobic001G249500 Sobic001G249500 Sobic005G190800--Sobic001G249500 Sobic005G190800--Sobic003G317800 Sobic005G190800--Sobic004G038300 Sobic005G190800--Sobic004G328900 Sobic007G069500 Sobic007G069500 Sobic005G190800--Sobic007G069500 Sobic006G175700--Sobic005G190800 Sobic008G030700 Sobic008G030700 Sobic006G175700--Sobic008G030700 Sobic002G278800 Sobic002G278800 Sobic006G175700--Sobic002G278800 Sobic006G175700--Sobic003G007800 Sobic006G175700--Sobic001G249500 Sobic001G338000 Sobic001G338000 Sobic006G175700--Sobic001G338000 Sobic006G175700--Sobic002G128600 Sobic003G131800 Sobic003G131800 Sobic006G175700--Sobic003G131800 Sobic002G278700 Sobic002G278700 Sobic006G175700--Sobic002G278700 Sobic004G328900--Sobic003G317800 Sobic004G328900--Sobic001G255300 Sobic004G328900--Sobic001G379300 Sobic004G328900--Sobic008G163200 Sobic004G328900--Sobic002G416950 Sobic004G328900--Sobic002G128600 Sobic004G328900--Sobic006G238100 Sobic004G328900--Sobic003G007800 Sobic004G328900--Sobic003G068300 Sobic003G317800--Sobic004G328900 Sobic003G317800--Sobic002G128600 Sobic003G317800--Sobic001G379300 Sobic003G317800--Sobic001G255300 Sobic003G317800--Sobic008G163200 Sobic003G317800--Sobic004G038300 Sobic003G317800--Sobic002G416950 Sobic003G317800--Sobic003G007800 Sobic003G317800--Sobic007G069500 Sobic002G128600--Sobic006G227000 Sobic002G128600--Sobic003G317800 Sobic002G128600--Sobic007G069500 Sobic002G128600--Sobic005G190800 Sobic002G128600--Sobic001G249500 Sobic002G128600--Sobic004G328900 Sobic002G128600--Sobic001G379300 Sobic002G128600--Sobic001G255300 Sobic002G128600--Sobic003G007800 Sobic005G029400--Sobic008G189500 Sobic005G029400--Sobic001G255300 Sobic005G029400--Sobic009G070600 Sobic005G029400--Sobic003G007800 Sobic005G029400--Sobic001G379300 Sobic005G029400--Sobic007G069500 Sobic005G029400--Sobic002G128600 Sobic005G029400--Sobic003G317800 Sobic005G029400--Sobic004G328900 Sobic004G038300--Sobic003G317800 Sobic004G038300--Sobic001G255300 Sobic004G038300--Sobic004G328900 Sobic004G038300--Sobic002G128600 Sobic004G038300--Sobic001G379300 Sobic004G038300--Sobic005G190800 Sobic004G038300--Sobic006G238100 Sobic002G209800 Sobic002G209800 Sobic004G038300--Sobic002G209800 Sobic004G038300--Sobic003G007800
Octagon: transcription factors


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