Gene annotation
Transcriptome id Sobic.005G029400.1
Synonym Sb05g002470
Functional annotation strictosidine synthase, putative, expressed
UniProt A0A1B6PPV0
Pfam PF03088
Panther DB PTHR10426 PTHR10426:SF22
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology GO:0016844; strictosidine synthase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G57030 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os11g04660.1 : strictosidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a033440
Brachypodium -
Barley HORVU5Hr1G043200.8 , HORVU5Hr1G043200.4 , HORVU5Hr1G043200.5 , HORVU5Hr1G043200.7 , HORVU5Hr1G043200.1 , HORVU5Hr1G043200.2 , HORVU5Hr1G043200.3
Wheat TraesCS5A02G131200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
2 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
3 Sobic.009G070600 HAD superfamily phosphatase, putative, expressed -
4 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
5 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.007G069500 expressed protein -
7 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
8 Sobic.003G317800 lysM domain containing protein, putative -
9 Sobic.004G328900 expressed protein -
10 Sobic.001G472000 Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed K13366: MPAO, polyamine oxidase
11 Sobic.002G207900 WAX2, putative, expressed -
12 Sobic.004G038300 cycloartenol synthase, putative, expressed -
13 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.001G363700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
16 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
17 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -
18 Sobic.007G146350 - -
19 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
20 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic005G029400 Sobic005G029400 Sobic008G189500 Sobic008G189500 Sobic005G029400--Sobic008G189500 Sobic001G255300 Sobic001G255300 Sobic005G029400--Sobic001G255300 Sobic009G070600 Sobic009G070600 Sobic005G029400--Sobic009G070600 Sobic003G007800 Sobic003G007800 Sobic005G029400--Sobic003G007800 Sobic001G379300 Sobic001G379300 Sobic005G029400--Sobic001G379300 Sobic007G069500 Sobic007G069500 Sobic005G029400--Sobic007G069500 Sobic002G128600 Sobic002G128600 Sobic005G029400--Sobic002G128600 Sobic003G317800 Sobic003G317800 Sobic005G029400--Sobic003G317800 Sobic004G328900 Sobic004G328900 Sobic005G029400--Sobic004G328900 Sobic008G189500--Sobic003G007800 Sobic001G472000 Sobic001G472000 Sobic008G189500--Sobic001G472000 Sobic008G189500--Sobic001G255300 Sobic008G189500--Sobic005G029400 Sobic008G189500--Sobic009G070600 Sobic008G189500--Sobic004G328900 Sobic008G189500--Sobic003G317800 Sobic008G189500--Sobic001G379300 Sobic008G189500--Sobic002G128600 Sobic001G255300--Sobic001G379300 Sobic001G255300--Sobic004G328900 Sobic006G238100 Sobic006G238100 Sobic001G255300--Sobic006G238100 Sobic001G255300--Sobic003G317800 Sobic008G163200 Sobic008G163200 Sobic001G255300--Sobic008G163200 Sobic002G416950 Sobic002G416950 Sobic001G255300--Sobic002G416950 Sobic001G255300--Sobic003G007800 Sobic001G255300--Sobic008G189500 Sobic003G068300 Sobic003G068300 Sobic001G255300--Sobic003G068300 Sobic009G070700 Sobic009G070700 Sobic009G070600--Sobic009G070700 Sobic009G070600--Sobic001G255300 Sobic009G070600--Sobic005G029400 Sobic009G070600--Sobic008G189500 Sobic009G070600--Sobic003G007800 Sobic009G070600--Sobic004G328900 Sobic002G207900 Sobic002G207900 Sobic009G070600--Sobic002G207900 Sobic009G070600--Sobic001G472000 Sobic009G070600--Sobic001G379300 Sobic003G007800--Sobic008G189500 Sobic003G007800--Sobic001G255300 Sobic005G190800 Sobic005G190800 Sobic003G007800--Sobic005G190800 Sobic006G175700 Sobic006G175700 Sobic003G007800--Sobic006G175700 Sobic003G007800--Sobic004G328900 Sobic003G007800--Sobic003G317800 Sobic003G007800--Sobic002G128600 Sobic003G007800--Sobic005G029400 Sobic004G038300 Sobic004G038300 Sobic003G007800--Sobic004G038300 Sobic001G379300--Sobic006G238100 Sobic001G379300--Sobic002G416950 Sobic001G379300--Sobic001G255300 Sobic001G379300--Sobic004G328900 Sobic001G379300--Sobic003G317800 Sobic004G060700 Sobic004G060700 Sobic001G379300--Sobic004G060700 Sobic007G009600 Sobic007G009600 Sobic001G379300--Sobic007G009600 Sobic001G379300--Sobic008G163200 Sobic001G379300--Sobic007G069500 Sobic007G069500--Sobic002G128600 Sobic007G069500--Sobic001G379300 Sobic006G227000 Sobic006G227000 Sobic007G069500--Sobic006G227000 Sobic007G069500--Sobic003G317800 Sobic007G069500--Sobic001G255300 Sobic007G069500--Sobic005G029400 Sobic007G069500--Sobic006G238100 Sobic007G069500--Sobic004G328900 Sobic006G253900 Sobic006G253900 Sobic007G069500--Sobic006G253900 Sobic002G128600--Sobic006G227000 Sobic002G128600--Sobic003G317800 Sobic002G128600--Sobic007G069500 Sobic002G128600--Sobic005G190800 Sobic001G249500 Sobic001G249500 Sobic002G128600--Sobic001G249500 Sobic002G128600--Sobic004G328900 Sobic002G128600--Sobic001G379300 Sobic002G128600--Sobic001G255300 Sobic002G128600--Sobic003G007800 Sobic003G317800--Sobic004G328900 Sobic003G317800--Sobic002G128600 Sobic003G317800--Sobic001G379300 Sobic003G317800--Sobic001G255300 Sobic003G317800--Sobic008G163200 Sobic003G317800--Sobic004G038300 Sobic003G317800--Sobic002G416950 Sobic003G317800--Sobic003G007800 Sobic003G317800--Sobic007G069500 Sobic004G328900--Sobic003G317800 Sobic004G328900--Sobic001G255300 Sobic004G328900--Sobic001G379300 Sobic004G328900--Sobic008G163200 Sobic004G328900--Sobic002G416950 Sobic004G328900--Sobic002G128600 Sobic004G328900--Sobic006G238100 Sobic004G328900--Sobic003G007800 Sobic004G328900--Sobic003G068300
Octagon: transcription factors


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