Gene annotation
| Transcriptome id | Sobic.001G363700.1 |
|---|---|
| Synonym | D501, CYP75B1, Sb01g034710, TT7 |
| Functional annotation | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543) cytochrome P450, putative, expressed |
| UniProt | C5WZK7 |
| Pfam | PF00067 |
| Panther DB | PTHR24298 PTHR24298:SF158 |
| NCBI CDD | KOG0156; Cytochrome P450 CYP2 subfamily |
| KEGG Orthology | - |
| Gene Ontology | GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding |
Orthologs (automatic annotation)
| TAIR | AT5G07990 : Cytochrome P450 superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os09g26960.1 : cytochrome P450, putative, expressed |
| MaizeGDB (Corn) | Zm00025a002573 |
| Brachypodium | - |
| Barley | HORVU2Hr1G125520.1 , HORVU5Hr1G017360.2 , HORVU5Hr1G017360.1 |
| Wheat | TraesCS2A02G591400 , TraesCS7A02G031800 |
| Populus | - |
JBrowse
| Sobic.001G363700 |
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.008G189500 | similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed | - |
| 2 | Sobic.005G029400 | strictosidine synthase, putative, expressed | - |
| 3 | Sobic.002G128600 | lecithin:cholesterol acyltransferase, putative, expressed | K06129: lysophospholipase III |
| 4 | Sobic.007G146350 | - | - |
| 5 | Sobic.003G007800 | phosphorylase domain containing protein, putative, expressed | - |
| 6 | Sobic.002G207900 | WAX2, putative, expressed | - |
| 7 | Sobic.003G287000 | BURP domain containing protein, expressed | - |
| 8 | Sobic.001G249500 | glutathione S-transferase, putative, expressed | K00799: GST, glutathione S-transferase |
| 9 | Sobic.001G255300 | Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed | K01592: tyrosine decarboxylase |
| 10 | Sobic.001G472000 | Polyamine oxidase 1("PubMedID : 26759170,PubMedID : 24597475")@amine oxidase, flavin-containing, domain containing protein, expressed | K13366: MPAO, polyamine oxidase |
| 11 | Sobic.001G068600 | app1, putative, expressed | - |
| 12 | Sobic.001G535600 | LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 13 | Sobic.008G030700 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 14 | Sobic.006G227000 | leucoanthocyanidin reductase, putative, expressed | K08695: anthocyanidin reductase |
| 15 | Sobic.009G070600 | HAD superfamily phosphatase, putative, expressed | - |
| 16 | Sobic.007G069500 | expressed protein | - |
| 17 | Sobic.008G032701 | - | - |
| 18 | Sobic.005G190800 | Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed | K05928: tocopherol O-methyltransferase |
| 19 | Sobic.006G175700 | down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed | - |
| 20 | Sobic.004G038300 | cycloartenol synthase, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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