Gene annotation
Transcriptome id Sobic.001G535600.2
Synonym Sb01g049830
Functional annotation LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt A0A1Z5SBV8
Pfam -
Panther DB PTHR33214 PTHR33214:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G66850 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os03g02050.1 : LTPL151 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a000190
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G535600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.003G287000 BURP domain containing protein, expressed -
3 Sobic.003G286900 - -
4 Sobic.001G363700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
5 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.002G207900 WAX2, putative, expressed -
7 Sobic.006G227000 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
8 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
9 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
10 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
11 Sobic.006G253900 absent or strongly suppressed during the accumulation of 3-deoxyanthocyanidins(PubMedID : 20529887)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed K00475: naringenin 3-dioxygenase
12 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
13 Sobic.002G064900 FHA domain containing protein, putative, expressed -
14 Sobic.005G029400 strictosidine synthase, putative, expressed -
15 Sobic.001G249600 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
16 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.007G069500 expressed protein -
18 Sobic.001G068600 app1, putative, expressed -
19 Sobic.009G070700 Acid phosphatase class B family protein(PubMedID : 26320239)@HAD superfamily phosphatase, putative, expressed -
20 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase


Gene co-expression network
sample Sobic001G535600 Sobic001G535600 Sobic008G030700 Sobic008G030700 Sobic001G535600--Sobic008G030700 Sobic003G287000 Sobic003G287000 Sobic001G535600--Sobic003G287000 Sobic003G286900 Sobic003G286900 Sobic001G535600--Sobic003G286900 Sobic001G363700 Sobic001G363700 Sobic001G535600--Sobic001G363700 Sobic001G249500 Sobic001G249500 Sobic001G535600--Sobic001G249500 Sobic002G207900 Sobic002G207900 Sobic001G535600--Sobic002G207900 Sobic006G227000 Sobic006G227000 Sobic001G535600--Sobic006G227000 Sobic002G128600 Sobic002G128600 Sobic001G535600--Sobic002G128600 Sobic005G190800 Sobic005G190800 Sobic001G535600--Sobic005G190800 Sobic006G175700 Sobic006G175700 Sobic008G030700--Sobic006G175700 Sobic002G278800 Sobic002G278800 Sobic008G030700--Sobic002G278800 Sobic002G278700 Sobic002G278700 Sobic008G030700--Sobic002G278700 Sobic008G030700--Sobic001G249500 Sobic003G131800 Sobic003G131800 Sobic008G030700--Sobic003G131800 Sobic010G012400 Sobic010G012400 Sobic008G030700--Sobic010G012400 Sobic008G030700--Sobic005G190800 Sobic008G030700--Sobic001G535600 Sobic003G173700 Sobic003G173700 Sobic008G030700--Sobic003G173700 Sobic003G287000--Sobic008G030700 Sobic003G287000--Sobic001G535600 Sobic003G287000--Sobic005G190800 Sobic003G287000--Sobic001G363700 Sobic003G287000--Sobic002G128600 Sobic003G287000--Sobic006G175700 Sobic003G287000--Sobic001G249500 Sobic005G036500 Sobic005G036500 Sobic003G287000--Sobic005G036500 Sobic003G007800 Sobic003G007800 Sobic003G287000--Sobic003G007800 Sobic003G286900--Sobic001G535600 Sobic003G286900--Sobic003G287000 Sobic003G286900--Sobic008G030700 Sobic002G064900 Sobic002G064900 Sobic003G286900--Sobic002G064900 Sobic004G338100 Sobic004G338100 Sobic003G286900--Sobic004G338100 Sobic003G286900--Sobic005G190800 Sobic003G286900--Sobic001G249500 Sobic006G253900 Sobic006G253900 Sobic003G286900--Sobic006G253900 Sobic003G286900--Sobic001G363700 Sobic008G189500 Sobic008G189500 Sobic001G363700--Sobic008G189500 Sobic005G029400 Sobic005G029400 Sobic001G363700--Sobic005G029400 Sobic001G363700--Sobic002G128600 Sobic007G146350 Sobic007G146350 Sobic001G363700--Sobic007G146350 Sobic001G363700--Sobic003G007800 Sobic001G363700--Sobic002G207900 Sobic001G363700--Sobic003G287000 Sobic001G363700--Sobic001G249500 Sobic001G255300 Sobic001G255300 Sobic001G363700--Sobic001G255300 Sobic001G249500--Sobic006G227000 Sobic001G249500--Sobic002G128600 Sobic001G249500--Sobic006G175700 Sobic001G249500--Sobic008G030700 Sobic001G249500--Sobic005G190800 Sobic001G249600 Sobic001G249600 Sobic001G249500--Sobic001G249600 Sobic007G069500 Sobic007G069500 Sobic001G249500--Sobic007G069500 Sobic001G249500--Sobic003G007800 Sobic007G195300 Sobic007G195300 Sobic001G249500--Sobic007G195300 Sobic001G453200 Sobic001G453200 Sobic002G207900--Sobic001G453200 Sobic004G249400 Sobic004G249400 Sobic002G207900--Sobic004G249400 Sobic002G207900--Sobic001G255300 Sobic001G541300 Sobic001G541300 Sobic002G207900--Sobic001G541300 Sobic002G207900--Sobic005G029400 Sobic003G120500 Sobic003G120500 Sobic002G207900--Sobic003G120500 Sobic003G114200 Sobic003G114200 Sobic002G207900--Sobic003G114200 Sobic001G379300 Sobic001G379300 Sobic002G207900--Sobic001G379300 Sobic002G141100 Sobic002G141100 Sobic002G207900--Sobic002G141100 Sobic006G227000--Sobic002G128600 Sobic006G227000--Sobic001G249500 Sobic006G227000--Sobic007G069500 Sobic006G227000--Sobic001G249600 Sobic006G227000--Sobic006G253900 Sobic006G227000--Sobic005G190800 Sobic006G227000--Sobic006G175700 Sobic003G317800 Sobic003G317800 Sobic006G227000--Sobic003G317800 Sobic003G230900 Sobic003G230900 Sobic006G227000--Sobic003G230900 Sobic002G128600--Sobic006G227000 Sobic002G128600--Sobic003G317800 Sobic002G128600--Sobic007G069500 Sobic002G128600--Sobic005G190800 Sobic002G128600--Sobic001G249500 Sobic004G328900 Sobic004G328900 Sobic002G128600--Sobic004G328900 Sobic002G128600--Sobic001G379300 Sobic002G128600--Sobic001G255300 Sobic002G128600--Sobic003G007800 Sobic005G190800--Sobic006G175700 Sobic005G190800--Sobic002G128600 Sobic005G190800--Sobic003G007800 Sobic005G190800--Sobic006G227000 Sobic005G190800--Sobic001G249500 Sobic005G190800--Sobic003G317800 Sobic004G038300 Sobic004G038300 Sobic005G190800--Sobic004G038300 Sobic005G190800--Sobic004G328900 Sobic005G190800--Sobic007G069500
Octagon: transcription factors


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