Gene annotation
Transcriptome id Sobic.003G286900.1
Synonym
Functional annotation -
UniProt A0A1B6Q5W9
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G535600 LTPL160 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.003G287000 BURP domain containing protein, expressed -
3 Sobic.008G030700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@LTPL7 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.002G064900 FHA domain containing protein, putative, expressed -
5 Sobic.004G338100 glycogen synthase 1, putative, expressed -
6 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
7 Sobic.001G249500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
8 Sobic.006G253900 absent or strongly suppressed during the accumulation of 3-deoxyanthocyanidins(PubMedID : 20529887)@naringenin,2-oxoglutarate 3-dioxygenase, putative, expressed K00475: naringenin 3-dioxygenase
9 Sobic.001G363700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
10 Sobic.006G227000 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
11 Sobic.006G060500 expressed protein -
12 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
13 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
14 Sobic.002G207900 WAX2, putative, expressed -
15 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
16 Sobic.002G065400 OsSub3 - Putative Subtilisin homologue, expressed -
17 Sobic.004G038300 cycloartenol synthase, putative, expressed -
18 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
19 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13
20 Sobic.001G453200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase


Gene co-expression network
sample Sobic003G286900 Sobic003G286900 Sobic001G535600 Sobic001G535600 Sobic003G286900--Sobic001G535600 Sobic003G287000 Sobic003G287000 Sobic003G286900--Sobic003G287000 Sobic008G030700 Sobic008G030700 Sobic003G286900--Sobic008G030700 Sobic002G064900 Sobic002G064900 Sobic003G286900--Sobic002G064900 Sobic004G338100 Sobic004G338100 Sobic003G286900--Sobic004G338100 Sobic005G190800 Sobic005G190800 Sobic003G286900--Sobic005G190800 Sobic001G249500 Sobic001G249500 Sobic003G286900--Sobic001G249500 Sobic006G253900 Sobic006G253900 Sobic003G286900--Sobic006G253900 Sobic001G363700 Sobic001G363700 Sobic003G286900--Sobic001G363700 Sobic001G535600--Sobic008G030700 Sobic001G535600--Sobic003G287000 Sobic001G535600--Sobic003G286900 Sobic001G535600--Sobic001G363700 Sobic001G535600--Sobic001G249500 Sobic002G207900 Sobic002G207900 Sobic001G535600--Sobic002G207900 Sobic006G227000 Sobic006G227000 Sobic001G535600--Sobic006G227000 Sobic002G128600 Sobic002G128600 Sobic001G535600--Sobic002G128600 Sobic001G535600--Sobic005G190800 Sobic003G287000--Sobic008G030700 Sobic003G287000--Sobic001G535600 Sobic003G287000--Sobic005G190800 Sobic003G287000--Sobic001G363700 Sobic003G287000--Sobic002G128600 Sobic006G175700 Sobic006G175700 Sobic003G287000--Sobic006G175700 Sobic003G287000--Sobic001G249500 Sobic005G036500 Sobic005G036500 Sobic003G287000--Sobic005G036500 Sobic003G007800 Sobic003G007800 Sobic003G287000--Sobic003G007800 Sobic008G030700--Sobic006G175700 Sobic002G278800 Sobic002G278800 Sobic008G030700--Sobic002G278800 Sobic002G278700 Sobic002G278700 Sobic008G030700--Sobic002G278700 Sobic008G030700--Sobic001G249500 Sobic003G131800 Sobic003G131800 Sobic008G030700--Sobic003G131800 Sobic010G012400 Sobic010G012400 Sobic008G030700--Sobic010G012400 Sobic008G030700--Sobic005G190800 Sobic008G030700--Sobic001G535600 Sobic003G173700 Sobic003G173700 Sobic008G030700--Sobic003G173700 Sobic002G064900--Sobic001G535600 Sobic002G064900--Sobic003G286900 Sobic009G231100 Sobic009G231100 Sobic002G064900--Sobic009G231100 Sobic008G176900 Sobic008G176900 Sobic002G064900--Sobic008G176900 Sobic002G064900--Sobic003G287000 Sobic008G030900 Sobic008G030900 Sobic002G064900--Sobic008G030900 Sobic004G299700 Sobic004G299700 Sobic002G064900--Sobic004G299700 Sobic001G423300 Sobic001G423300 Sobic002G064900--Sobic001G423300 Sobic006G140300 Sobic006G140300 Sobic002G064900--Sobic006G140300 Sobic004G338100--Sobic008G030700 Sobic004G338100--Sobic003G287000 Sobic004G338100--Sobic006G175700 Sobic001G500100 Sobic001G500100 Sobic004G338100--Sobic001G500100 Sobic007G108800 Sobic007G108800 Sobic004G338100--Sobic007G108800 Sobic001G249600 Sobic001G249600 Sobic004G338100--Sobic001G249600 Sobic004G338100--Sobic001G535600 Sobic007G069000 Sobic007G069000 Sobic004G338100--Sobic007G069000 Sobic006G084400 Sobic006G084400 Sobic004G338100--Sobic006G084400 Sobic005G190800--Sobic006G175700 Sobic005G190800--Sobic002G128600 Sobic005G190800--Sobic003G007800 Sobic005G190800--Sobic006G227000 Sobic005G190800--Sobic001G249500 Sobic003G317800 Sobic003G317800 Sobic005G190800--Sobic003G317800 Sobic004G038300 Sobic004G038300 Sobic005G190800--Sobic004G038300 Sobic004G328900 Sobic004G328900 Sobic005G190800--Sobic004G328900 Sobic007G069500 Sobic007G069500 Sobic005G190800--Sobic007G069500 Sobic001G249500--Sobic006G227000 Sobic001G249500--Sobic002G128600 Sobic001G249500--Sobic006G175700 Sobic001G249500--Sobic008G030700 Sobic001G249500--Sobic005G190800 Sobic001G249500--Sobic001G249600 Sobic001G249500--Sobic007G069500 Sobic001G249500--Sobic003G007800 Sobic007G195300 Sobic007G195300 Sobic001G249500--Sobic007G195300 Sobic006G253900--Sobic006G227000 Sobic006G253900--Sobic007G069500 Sobic006G253900--Sobic002G128600 Sobic006G253900--Sobic001G249600 Sobic006G253900--Sobic001G249500 Sobic006G253900--Sobic003G317800 Sobic001G379300 Sobic001G379300 Sobic006G253900--Sobic001G379300 Sobic001G255300 Sobic001G255300 Sobic006G253900--Sobic001G255300 Sobic006G253900--Sobic005G190800 Sobic008G189500 Sobic008G189500 Sobic001G363700--Sobic008G189500 Sobic005G029400 Sobic005G029400 Sobic001G363700--Sobic005G029400 Sobic001G363700--Sobic002G128600 Sobic007G146350 Sobic007G146350 Sobic001G363700--Sobic007G146350 Sobic001G363700--Sobic003G007800 Sobic001G363700--Sobic002G207900 Sobic001G363700--Sobic003G287000 Sobic001G363700--Sobic001G249500 Sobic001G363700--Sobic001G255300
Octagon: transcription factors


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