Gene annotation
Transcriptome id Sobic.010G143600.1,Sobic.010G143600.3,Sobic.010G143600.2
Synonym
Functional annotation ATP-binding region, ATPase-like domain containing protein, expressed
UniProt A0A194YJ93 , A0A194YJ71
Pfam PF13589
Panther DB PTHR23336
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G19100 : Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
RAP-DB (Rice) LOC_Os06g28060.1 : ATP-binding region, ATPase-like domain containing protein, expressed
MaizeGDB (Corn) Zm00025a050736
Brachypodium -
Barley HORVU7Hr1G048310.11 , HORVU7Hr1G048310.13 , HORVU7Hr1G048310.12 , HORVU7Hr1G048310.15 , HORVU7Hr1G048310.14 , HORVU7Hr1G048310.17 , HORVU7Hr1G048310.16 , HORVU7Hr1G048310.19 , HORVU7Hr1G048310.18 , HORVU7Hr1G048310.40 , HORVU7Hr1G048310.41 , HORVU7Hr1G048310.6 , HORVU7Hr1G048310.39 , HORVU7Hr1G048310.38 , HORVU7Hr1G048310.37 , HORVU7Hr1G048310.36 , HORVU7Hr1G048310.35 , HORVU7Hr1G048310.31 , HORVU7Hr1G048310.30 , HORVU7Hr1G048310.28 , HORVU7Hr1G048310.29 , HORVU7Hr1G048310.24 , HORVU7Hr1G048310.25 , HORVU7Hr1G048310.26 , HORVU7Hr1G048310.27 , HORVU7Hr1G048310.20 , HORVU7Hr1G048310.21 , HORVU7Hr1G048310.22 , HORVU7Hr1G048310.23
Wheat TraesCS7A02G235300 , TraesCS7A02G235300 , TraesCS7D02G235400 , TraesCS7D02G235400 , TraesCS7D02G235400 , TraesCS7D02G235400 , TraesCS7D02G235400 , TraesCS7B02G133500 , TraesCS7B02G133500
Populus -


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cDNA sequences
Sobic.010G143600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G078700 OsFBX411 - F-box domain containing protein, expressed -
2 Sobic.002G173400 expressed protein -
3 Sobic.003G194800 EF hand family protein, putative, expressed -
4 Sobic.009G120400 methyltransferase, putative, expressed -
5 Sobic.003G183466 - -
6 Sobic.003G204100 expressed protein -
7 Sobic.006G008300 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
8 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
9 Sobic.003G184666 - -
10 Sobic.003G299500 expressed protein -
11 Sobic.004G278900 regulatory protein, putative, expressed -
12 Sobic.004G215600 - K15271: HFM1, ATP-dependent DNA helicase HFM1/MER3
13 Sobic.002G123600 expressed protein -
14 Sobic.002G078100 PPR repeat domain containing protein, putative, expressed -
15 Sobic.003G392100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oligopeptidase, putative, expressed K01392: thimet oligopeptidase
16 Sobic.009G105400 OsFBX135 - F-box domain containing protein, expressed -
17 Sobic.006G088820 - -
18 Sobic.001G497000 RNA helicase SDE3, putative, expressed K18422: helicase MOV-10
19 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
20 Sobic.008G047500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic010G143600 Sobic010G143600 Sobic005G078700 Sobic005G078700 Sobic010G143600--Sobic005G078700 Sobic002G173400 Sobic002G173400 Sobic010G143600--Sobic002G173400 Sobic003G194800 Sobic003G194800 Sobic010G143600--Sobic003G194800 Sobic009G120400 Sobic009G120400 Sobic010G143600--Sobic009G120400 Sobic003G183466 Sobic003G183466 Sobic010G143600--Sobic003G183466 Sobic003G204100 Sobic003G204100 Sobic010G143600--Sobic003G204100 Sobic006G008300 Sobic006G008300 Sobic010G143600--Sobic006G008300 Sobic003G397100 Sobic003G397100 Sobic010G143600--Sobic003G397100 Sobic003G184666 Sobic003G184666 Sobic010G143600--Sobic003G184666 Sobic003G325900 Sobic003G325900 Sobic005G078700--Sobic003G325900 Sobic005G078700--Sobic010G143600 Sobic005G078700--Sobic003G184666 Sobic001G268300 Sobic001G268300 Sobic005G078700--Sobic001G268300 Sobic002G362200 Sobic002G362200 Sobic005G078700--Sobic002G362200 Sobic006G262800 Sobic006G262800 Sobic005G078700--Sobic006G262800 Sobic004G282500 Sobic004G282500 Sobic005G078700--Sobic004G282500 Sobic009G154900 Sobic009G154900 Sobic005G078700--Sobic009G154900 Sobic009G105400 Sobic009G105400 Sobic005G078700--Sobic009G105400 Sobic008G131900 Sobic008G131900 Sobic002G173400--Sobic008G131900 Sobic002G173400--Sobic009G120400 Sobic002G173400--Sobic003G194800 Sobic008G047500 Sobic008G047500 Sobic002G173400--Sobic008G047500 Sobic002G052800 Sobic002G052800 Sobic002G173400--Sobic002G052800 Sobic010G038200 Sobic010G038200 Sobic002G173400--Sobic010G038200 Sobic002G173400--Sobic010G143600 Sobic004G000400 Sobic004G000400 Sobic002G173400--Sobic004G000400 Sobic005G060100 Sobic005G060100 Sobic002G173400--Sobic005G060100 Sobic008G085950 Sobic008G085950 Sobic003G194800--Sobic008G085950 Sobic003G194800--Sobic008G047500 Sobic003G194800--Sobic009G120400 Sobic003G194800--Sobic003G204100 Sobic003G194800--Sobic002G173400 Sobic003G299500 Sobic003G299500 Sobic003G194800--Sobic003G299500 Sobic007G105700 Sobic007G105700 Sobic003G194800--Sobic007G105700 Sobic004G215600 Sobic004G215600 Sobic003G194800--Sobic004G215600 Sobic003G420400 Sobic003G420400 Sobic003G194800--Sobic003G420400 Sobic009G120400--Sobic002G173400 Sobic002G426100 Sobic002G426100 Sobic009G120400--Sobic002G426100 Sobic007G034200 Sobic007G034200 Sobic009G120400--Sobic007G034200 Sobic009G120400--Sobic003G194800 Sobic009G120400--Sobic004G215600 Sobic009G120400--Sobic007G105700 Sobic009G120400--Sobic003G299500 Sobic007G186400 Sobic007G186400 Sobic009G120400--Sobic007G186400 Sobic001G051400 Sobic001G051400 Sobic009G120400--Sobic001G051400 Sobic003G326500 Sobic003G326500 Sobic003G183466--Sobic003G326500 Sobic003G183466--Sobic010G143600 Sobic003G183466--Sobic002G173400 Sobic003G129500 Sobic003G129500 Sobic003G183466--Sobic003G129500 Sobic004G278900 Sobic004G278900 Sobic003G183466--Sobic004G278900 Sobic003G183466--Sobic009G120400 Sobic002G095300 Sobic002G095300 Sobic003G183466--Sobic002G095300 Sobic002G286632 Sobic002G286632 Sobic003G183466--Sobic002G286632 Sobic008G046200 Sobic008G046200 Sobic003G183466--Sobic008G046200 Sobic003G204100--Sobic008G047500 Sobic003G204100--Sobic003G194800 Sobic003G045450 Sobic003G045450 Sobic003G204100--Sobic003G045450 Sobic004G298600 Sobic004G298600 Sobic003G204100--Sobic004G298600 Sobic003G204100--Sobic008G085950 Sobic003G204100--Sobic002G173400 Sobic003G204100--Sobic010G143600 Sobic001G117900 Sobic001G117900 Sobic003G204100--Sobic001G117900 Sobic007G102000 Sobic007G102000 Sobic003G204100--Sobic007G102000 Sobic001G395200 Sobic001G395200 Sobic006G008300--Sobic001G395200 Sobic006G008300--Sobic010G143600 Sobic003G104100 Sobic003G104100 Sobic006G008300--Sobic003G104100 Sobic003G153900 Sobic003G153900 Sobic006G008300--Sobic003G153900 Sobic009G216500 Sobic009G216500 Sobic006G008300--Sobic009G216500 Sobic003G411700 Sobic003G411700 Sobic006G008300--Sobic003G411700 Sobic006G008300--Sobic009G105400 Sobic006G008300--Sobic003G129500 Sobic009G207400 Sobic009G207400 Sobic006G008300--Sobic009G207400 Sobic001G242300 Sobic001G242300 Sobic003G397100--Sobic001G242300 Sobic002G123600 Sobic002G123600 Sobic003G397100--Sobic002G123600 Sobic002G260700 Sobic002G260700 Sobic003G397100--Sobic002G260700 Sobic008G090300 Sobic008G090300 Sobic003G397100--Sobic008G090300 Sobic008G169400 Sobic008G169400 Sobic003G397100--Sobic008G169400 Sobic008G112100 Sobic008G112100 Sobic003G397100--Sobic008G112100 Sobic003G397100--Sobic010G143600 Sobic001G448100 Sobic001G448100 Sobic003G397100--Sobic001G448100 Sobic008G031200 Sobic008G031200 Sobic003G397100--Sobic008G031200 Sobic010G252200 Sobic010G252200 Sobic003G184666--Sobic010G252200 Sobic003G184666--Sobic005G078700 Sobic003G184666--Sobic010G143600 Sobic003G184666--Sobic003G183466 Sobic006G126800 Sobic006G126800 Sobic003G184666--Sobic006G126800 Sobic003G184666--Sobic003G325900 Sobic003G184666--Sobic003G045450 Sobic003G184666--Sobic002G362200 Sobic004G222150 Sobic004G222150 Sobic003G184666--Sobic004G222150
Octagon: transcription factors


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