Gene annotation
Transcriptome id Sobic.004G278900.6,Sobic.004G278900.2,Sobic.004G278900.3,Sobic.004G278900.5,Sobic.004G278900.4
Synonym Sb04g031550
Functional annotation regulatory protein, putative, expressed
UniProt A0A1Z5RQE3 , A0A1Z5RPC2
Pfam PF03407
Panther DB PTHR24015 PTHR24015:SF684
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14590 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os02g46120.2 : regulatory protein, putative, expressed
MaizeGDB (Corn) Zm00025a032355 , Zm00025a010051
Brachypodium PNT69249 , KQK00814 , PNT69250
Barley HORVU6Hr1G066510.8 , HORVU6Hr1G066510.9 , HORVU6Hr1G066510.2 , HORVU6Hr1G066510.3 , HORVU6Hr1G066510.1 , HORVU6Hr1G066510.6 , HORVU6Hr1G066510.7 , HORVU6Hr1G066510.4 , HORVU6Hr1G066510.5 , HORVU6Hr1G066510.10 , HORVU6Hr1G066510.11 , HORVU6Hr1G066510.12
Wheat TraesCS6B02G288800 , TraesCS6A02G261500 , TraesCS6A02G261500 , TraesCS6D02G242200
Populus -


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cDNA sequences
Sobic.004G278900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G183466 - -
2 Sobic.010G143600 ATP-binding region, ATPase-like domain containing protein, expressed -
3 Sobic.010G235700 OsFBLD1 - F-box, LRR and FBD domain containing protein, expressed -
4 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
5 Sobic.003G299500 expressed protein -
6 Sobic.001G123600 domain of unknown function, DUF250 domain containing protein, expressed -
7 Sobic.006G184200 zinc RING finger protein, putative, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
8 Sobic.006G191200 tRNA-splicing endonuclease positive effector-related, putative, expressed K10706: SETX, senataxin
9 Sobic.007G034200 expressed protein K10875: RAD54L, DNA repair and recombination protein RAD54 and RAD54-like protein
10 Sobic.003G049600 CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
11 Sobic.003G010900 expressed protein -
12 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -
13 Sobic.005G087300 protein kinase family protein, putative, expressed -
14 Sobic.009G120400 methyltransferase, putative, expressed -
15 Sobic.002G066800 RNA ligase isoform 1, putative, expressed -
16 Sobic.007G017200 OsFBX142 - F-box domain containing protein, expressed -
17 Sobic.002G123600 expressed protein -
18 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
19 Sobic.004G189700 OsFBL33 - F-box domain and LRR containing protein, expressed -
20 Sobic.007G174900 carrier, putative, expressed -


Gene co-expression network
sample Sobic004G278900 Sobic004G278900 Sobic003G183466 Sobic003G183466 Sobic004G278900--Sobic003G183466 Sobic010G143600 Sobic010G143600 Sobic004G278900--Sobic010G143600 Sobic010G235700 Sobic010G235700 Sobic004G278900--Sobic010G235700 Sobic003G397100 Sobic003G397100 Sobic004G278900--Sobic003G397100 Sobic003G299500 Sobic003G299500 Sobic004G278900--Sobic003G299500 Sobic001G123600 Sobic001G123600 Sobic004G278900--Sobic001G123600 Sobic006G184200 Sobic006G184200 Sobic004G278900--Sobic006G184200 Sobic006G191200 Sobic006G191200 Sobic004G278900--Sobic006G191200 Sobic007G034200 Sobic007G034200 Sobic004G278900--Sobic007G034200 Sobic003G326500 Sobic003G326500 Sobic003G183466--Sobic003G326500 Sobic003G183466--Sobic010G143600 Sobic002G173400 Sobic002G173400 Sobic003G183466--Sobic002G173400 Sobic003G129500 Sobic003G129500 Sobic003G183466--Sobic003G129500 Sobic003G183466--Sobic004G278900 Sobic009G120400 Sobic009G120400 Sobic003G183466--Sobic009G120400 Sobic002G095300 Sobic002G095300 Sobic003G183466--Sobic002G095300 Sobic002G286632 Sobic002G286632 Sobic003G183466--Sobic002G286632 Sobic008G046200 Sobic008G046200 Sobic003G183466--Sobic008G046200 Sobic005G078700 Sobic005G078700 Sobic010G143600--Sobic005G078700 Sobic010G143600--Sobic002G173400 Sobic003G194800 Sobic003G194800 Sobic010G143600--Sobic003G194800 Sobic010G143600--Sobic009G120400 Sobic010G143600--Sobic003G183466 Sobic003G204100 Sobic003G204100 Sobic010G143600--Sobic003G204100 Sobic006G008300 Sobic006G008300 Sobic010G143600--Sobic006G008300 Sobic010G143600--Sobic003G397100 Sobic003G184666 Sobic003G184666 Sobic010G143600--Sobic003G184666 Sobic010G235700--Sobic004G278900 Sobic003G010900 Sobic003G010900 Sobic010G235700--Sobic003G010900 Sobic007G081900 Sobic007G081900 Sobic010G235700--Sobic007G081900 Sobic004G241600 Sobic004G241600 Sobic010G235700--Sobic004G241600 Sobic010G235700--Sobic001G123600 Sobic009G032200 Sobic009G032200 Sobic010G235700--Sobic009G032200 Sobic006G091000 Sobic006G091000 Sobic010G235700--Sobic006G091000 Sobic002G430900 Sobic002G430900 Sobic010G235700--Sobic002G430900 Sobic010G269300 Sobic010G269300 Sobic010G235700--Sobic010G269300 Sobic001G242300 Sobic001G242300 Sobic003G397100--Sobic001G242300 Sobic002G123600 Sobic002G123600 Sobic003G397100--Sobic002G123600 Sobic002G260700 Sobic002G260700 Sobic003G397100--Sobic002G260700 Sobic008G090300 Sobic008G090300 Sobic003G397100--Sobic008G090300 Sobic008G169400 Sobic008G169400 Sobic003G397100--Sobic008G169400 Sobic008G112100 Sobic008G112100 Sobic003G397100--Sobic008G112100 Sobic003G397100--Sobic010G143600 Sobic001G448100 Sobic001G448100 Sobic003G397100--Sobic001G448100 Sobic008G031200 Sobic008G031200 Sobic003G397100--Sobic008G031200 Sobic003G299500--Sobic007G034200 Sobic003G299500--Sobic003G194800 Sobic004G106250 Sobic004G106250 Sobic003G299500--Sobic004G106250 Sobic003G299500--Sobic009G120400 Sobic003G016500 Sobic003G016500 Sobic003G299500--Sobic003G016500 Sobic003G299500--Sobic001G123600 Sobic006G245900 Sobic006G245900 Sobic003G299500--Sobic006G245900 Sobic002G235900 Sobic002G235900 Sobic003G299500--Sobic002G235900 Sobic003G299500--Sobic006G191200 Sobic001G123600--Sobic006G191200 Sobic001G229300 Sobic001G229300 Sobic001G123600--Sobic001G229300 Sobic003G360300 Sobic003G360300 Sobic001G123600--Sobic003G360300 Sobic001G123600--Sobic007G034200 Sobic002G386900 Sobic002G386900 Sobic001G123600--Sobic002G386900 Sobic001G123600--Sobic010G269300 Sobic001G123600--Sobic009G120400 Sobic001G123600--Sobic003G299500 Sobic001G123600--Sobic003G010900 Sobic008G160600 Sobic008G160600 Sobic006G184200--Sobic008G160600 Sobic010G038900 Sobic010G038900 Sobic006G184200--Sobic010G038900 Sobic002G354800 Sobic002G354800 Sobic006G184200--Sobic002G354800 Sobic008G174500 Sobic008G174500 Sobic006G184200--Sobic008G174500 Sobic003G042200 Sobic003G042200 Sobic006G184200--Sobic003G042200 Sobic002G230400 Sobic002G230400 Sobic006G184200--Sobic002G230400 Sobic008G087200 Sobic008G087200 Sobic006G184200--Sobic008G087200 Sobic010G009600 Sobic010G009600 Sobic006G184200--Sobic010G009600 Sobic003G379900 Sobic003G379900 Sobic006G184200--Sobic003G379900 Sobic006G191200--Sobic001G123600 Sobic002G296400 Sobic002G296400 Sobic006G191200--Sobic002G296400 Sobic001G051400 Sobic001G051400 Sobic006G191200--Sobic001G051400 Sobic002G078100 Sobic002G078100 Sobic006G191200--Sobic002G078100 Sobic002G066800 Sobic002G066800 Sobic006G191200--Sobic002G066800 Sobic006G191200--Sobic003G299500 Sobic006G191200--Sobic002G386900 Sobic006G191200--Sobic009G120400 Sobic004G097900 Sobic004G097900 Sobic006G191200--Sobic004G097900 Sobic007G034200--Sobic003G299500 Sobic007G034200--Sobic009G120400 Sobic007G034200--Sobic001G051400 Sobic007G034200--Sobic001G123600 Sobic007G034200--Sobic003G194800 Sobic007G034200--Sobic002G386900 Sobic007G034200--Sobic006G191200 Sobic003G113300 Sobic003G113300 Sobic007G034200--Sobic003G113300 Sobic006G170900 Sobic006G170900 Sobic007G034200--Sobic006G170900
Octagon: transcription factors


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