Gene annotation
Transcriptome id Sobic.003G397100.1
Synonym Sb03g043390
Functional annotation lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
UniProt C5XFK7
Pfam PF05212
Panther DB PTHR31210 PTHR31210:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G67850 : Protein of unknown function (DUF707)
RAP-DB (Rice) LOC_Os02g19510.1 : lysine ketoglutarate reductase trans-splicing related 1, putative, expressed
MaizeGDB (Corn) Zm00025a019766 , Zm00025a031438 , Zm00025a026338
Brachypodium PNT73431 , KQK11129
Barley HORVU3Hr1G114290.1 , HORVU0Hr1G031960.1 , HORVU3Hr1G092590.1
Wheat TraesCS3D02G530200 , TraesCS3A02G416100 , TraesCS3A02G416100 , TraesCS3D02G411800 , TraesCS3D02G411800 , TraesCS3B02G592300 , TraesCS3A02G525000 , TraesCS3A02G416100 , TraesCS3B02G451200 , TraesCS3B02G451200
Populus PNT14748 , PNT14749 , PNT14744 , PNT14745 , PNT14746 , PNT14747 , PNT14750


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cDNA sequences
Sobic.003G397100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G242300 expressed protein -
2 Sobic.002G123600 expressed protein -
3 Sobic.002G260700 ARF GTPase-activating domain-containing protein, putative, expressed K12489: Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
4 Sobic.008G090300 - -
5 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
6 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
7 Sobic.010G143600 ATP-binding region, ATPase-like domain containing protein, expressed -
8 Sobic.001G448100 DNA-directed RNA polymerase subunit, putative, expressed K16252: NRPD2, DNA-directed RNA polymerase IV and V subunit 2
9 Sobic.008G031200 pentatricopeptide, putative, expressed -
10 Sobic.006G091000 hydrolase, alpha/beta fold family domain containing protein, expressed K13617: protein phosphatase methylesterase 1
11 Sobic.004G129500 expressed protein -
12 Sobic.010G103500 ATMAP70 protein, putative, expressed -
13 Sobic.009G120400 methyltransferase, putative, expressed -
14 Sobic.007G036800 xylosyltransferase, putative, expressed -
15 Sobic.003G067201 - -
16 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
17 Sobic.004G278900 regulatory protein, putative, expressed -
18 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
19 Sobic.002G182000 cwfJ-like family protein, putative, expressed -
20 Sobic.003G205100 helicase, putative, expressed K11136: regulator of telomere elongation helicase 1


Gene co-expression network
sample Sobic003G397100 Sobic003G397100 Sobic001G242300 Sobic001G242300 Sobic003G397100--Sobic001G242300 Sobic002G123600 Sobic002G123600 Sobic003G397100--Sobic002G123600 Sobic002G260700 Sobic002G260700 Sobic003G397100--Sobic002G260700 Sobic008G090300 Sobic008G090300 Sobic003G397100--Sobic008G090300 Sobic008G169400 Sobic008G169400 Sobic003G397100--Sobic008G169400 Sobic008G112100 Sobic008G112100 Sobic003G397100--Sobic008G112100 Sobic010G143600 Sobic010G143600 Sobic003G397100--Sobic010G143600 Sobic001G448100 Sobic001G448100 Sobic003G397100--Sobic001G448100 Sobic008G031200 Sobic008G031200 Sobic003G397100--Sobic008G031200 Sobic001G242300--Sobic003G397100 Sobic006G262700 Sobic006G262700 Sobic001G242300--Sobic006G262700 Sobic001G242300--Sobic002G123600 Sobic004G256900 Sobic004G256900 Sobic001G242300--Sobic004G256900 Sobic001G242300--Sobic008G169400 Sobic003G331000 Sobic003G331000 Sobic001G242300--Sobic003G331000 Sobic001G361200 Sobic001G361200 Sobic001G242300--Sobic001G361200 Sobic009G120400 Sobic009G120400 Sobic001G242300--Sobic009G120400 Sobic006G237500 Sobic006G237500 Sobic001G242300--Sobic006G237500 Sobic006G127200 Sobic006G127200 Sobic002G123600--Sobic006G127200 Sobic008G090400 Sobic008G090400 Sobic002G123600--Sobic008G090400 Sobic004G306100 Sobic004G306100 Sobic002G123600--Sobic004G306100 Sobic002G095300 Sobic002G095300 Sobic002G123600--Sobic002G095300 Sobic002G271400 Sobic002G271400 Sobic002G123600--Sobic002G271400 Sobic002G123600--Sobic003G397100 Sobic002G123600--Sobic001G242300 Sobic003G411700 Sobic003G411700 Sobic002G123600--Sobic003G411700 Sobic004G129500 Sobic004G129500 Sobic002G123600--Sobic004G129500 Sobic010G103500 Sobic010G103500 Sobic002G260700--Sobic010G103500 Sobic002G260700--Sobic004G306100 Sobic002G418100 Sobic002G418100 Sobic002G260700--Sobic002G418100 Sobic002G260700--Sobic003G397100 Sobic009G052100 Sobic009G052100 Sobic002G260700--Sobic009G052100 Sobic003G315700 Sobic003G315700 Sobic002G260700--Sobic003G315700 Sobic002G260700--Sobic008G169400 Sobic002G260700--Sobic004G129500 Sobic010G052400 Sobic010G052400 Sobic002G260700--Sobic010G052400 Sobic008G099500 Sobic008G099500 Sobic008G090300--Sobic008G099500 Sobic008G090300--Sobic003G397100 Sobic006G066000 Sobic006G066000 Sobic008G090300--Sobic006G066000 Sobic004G189700 Sobic004G189700 Sobic008G090300--Sobic004G189700 Sobic008G084401 Sobic008G084401 Sobic008G090300--Sobic008G084401 Sobic008G090300--Sobic008G090400 Sobic010G237650 Sobic010G237650 Sobic008G090300--Sobic010G237650 Sobic008G090300--Sobic008G169400 Sobic007G070300 Sobic007G070300 Sobic008G090300--Sobic007G070300 Sobic001G079900 Sobic001G079900 Sobic008G169400--Sobic001G079900 Sobic003G153900 Sobic003G153900 Sobic008G169400--Sobic003G153900 Sobic007G031300 Sobic007G031300 Sobic008G169400--Sobic007G031300 Sobic009G141700 Sobic009G141700 Sobic008G169400--Sobic009G141700 Sobic002G370400 Sobic002G370400 Sobic008G169400--Sobic002G370400 Sobic001G494100 Sobic001G494100 Sobic008G169400--Sobic001G494100 Sobic002G293700 Sobic002G293700 Sobic008G169400--Sobic002G293700 Sobic009G158900 Sobic009G158900 Sobic008G169400--Sobic009G158900 Sobic008G169400--Sobic003G397100 Sobic009G054400 Sobic009G054400 Sobic008G112100--Sobic009G054400 Sobic008G112100--Sobic003G397100 Sobic007G036800 Sobic007G036800 Sobic008G112100--Sobic007G036800 Sobic007G010200 Sobic007G010200 Sobic008G112100--Sobic007G010200 Sobic001G433600 Sobic001G433600 Sobic008G112100--Sobic001G433600 Sobic008G087200 Sobic008G087200 Sobic008G112100--Sobic008G087200 Sobic008G112100--Sobic002G123600 Sobic004G293400 Sobic004G293400 Sobic008G112100--Sobic004G293400 Sobic001G381500 Sobic001G381500 Sobic008G112100--Sobic001G381500 Sobic005G078700 Sobic005G078700 Sobic010G143600--Sobic005G078700 Sobic002G173400 Sobic002G173400 Sobic010G143600--Sobic002G173400 Sobic003G194800 Sobic003G194800 Sobic010G143600--Sobic003G194800 Sobic010G143600--Sobic009G120400 Sobic003G183466 Sobic003G183466 Sobic010G143600--Sobic003G183466 Sobic003G204100 Sobic003G204100 Sobic010G143600--Sobic003G204100 Sobic006G008300 Sobic006G008300 Sobic010G143600--Sobic006G008300 Sobic010G143600--Sobic003G397100 Sobic003G184666 Sobic003G184666 Sobic010G143600--Sobic003G184666 Sobic002G079100 Sobic002G079100 Sobic001G448100--Sobic002G079100 Sobic001G448100--Sobic003G397100 Sobic004G007900 Sobic004G007900 Sobic001G448100--Sobic004G007900 Sobic002G235900 Sobic002G235900 Sobic001G448100--Sobic002G235900 Sobic002G380100 Sobic002G380100 Sobic001G448100--Sobic002G380100 Sobic009G154900 Sobic009G154900 Sobic001G448100--Sobic009G154900 Sobic001G522400 Sobic001G522400 Sobic001G448100--Sobic001G522400 Sobic009G000400 Sobic009G000400 Sobic001G448100--Sobic009G000400 Sobic003G067201 Sobic003G067201 Sobic001G448100--Sobic003G067201 Sobic008G179000 Sobic008G179000 Sobic008G031200--Sobic008G179000 Sobic001G268300 Sobic001G268300 Sobic008G031200--Sobic001G268300 Sobic010G252700 Sobic010G252700 Sobic008G031200--Sobic010G252700 Sobic002G362200 Sobic002G362200 Sobic008G031200--Sobic002G362200 Sobic008G031200--Sobic003G397100 Sobic008G031200--Sobic003G153900 Sobic002G084400 Sobic002G084400 Sobic008G031200--Sobic002G084400 Sobic001G537400 Sobic001G537400 Sobic008G031200--Sobic001G537400 Sobic008G031200--Sobic002G123600
Octagon: transcription factors


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