Gene annotation
Transcriptome id Sobic.001G242300.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5S7G0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os10g13630.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G242300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G397100 lysine ketoglutarate reductase trans-splicing related 1, putative, expressed -
2 Sobic.006G262700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phytosulfokine receptor precursor, putative, expressed -
3 Sobic.002G123600 expressed protein -
4 Sobic.004G256900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
5 Sobic.008G169400 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf and root"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin response factor, putative, expressed -
6 Sobic.003G331000 exostosin family domain containing protein, expressed -
7 Sobic.001G361200 expressed protein -
8 Sobic.009G120400 methyltransferase, putative, expressed -
9 Sobic.006G237500 PPR repeat domain containing protein, putative, expressed -
10 Sobic.001G211500 LIG1 - Putative DNA ligase I, expressed K10747: DNA ligase 1
11 Sobic.003G028400 OsFBX234 - F-box domain containing protein, expressed -
12 Sobic.006G069100 pentatricopeptide, putative, expressed -
13 Sobic.003G205100 helicase, putative, expressed K11136: regulator of telomere elongation helicase 1
14 Sobic.010G068900 glutamate receptor 2.6 precursor, putative, expressed K05387: glutamate receptor, ionotropic, plant
15 Sobic.009G122900 alpha 1,3-xylosyltransferase, putative, expressed K11714: rhamnogalacturonan II specific xylosyltransferase
16 Sobic.010G227000 pentatricopeptide, putative, expressed -
17 Sobic.008G112100 Phospholipid synthesis protein 1 PLS1 (Zm)(PubMedID : 27208977)@acyltransferase, putative, expressed K13523: lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase
18 Sobic.009G063500 OsWAK75 - OsWAK receptor-like protein kinase, expressed -
19 Sobic.004G241000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
20 Sobic.010G190900 pentatricopeptide, putative, expressed -


Gene co-expression network
sample Sobic001G242300 Sobic001G242300 Sobic003G397100 Sobic003G397100 Sobic001G242300--Sobic003G397100 Sobic006G262700 Sobic006G262700 Sobic001G242300--Sobic006G262700 Sobic002G123600 Sobic002G123600 Sobic001G242300--Sobic002G123600 Sobic004G256900 Sobic004G256900 Sobic001G242300--Sobic004G256900 Sobic008G169400 Sobic008G169400 Sobic001G242300--Sobic008G169400 Sobic003G331000 Sobic003G331000 Sobic001G242300--Sobic003G331000 Sobic001G361200 Sobic001G361200 Sobic001G242300--Sobic001G361200 Sobic009G120400 Sobic009G120400 Sobic001G242300--Sobic009G120400 Sobic006G237500 Sobic006G237500 Sobic001G242300--Sobic006G237500 Sobic003G397100--Sobic001G242300 Sobic003G397100--Sobic002G123600 Sobic002G260700 Sobic002G260700 Sobic003G397100--Sobic002G260700 Sobic008G090300 Sobic008G090300 Sobic003G397100--Sobic008G090300 Sobic003G397100--Sobic008G169400 Sobic008G112100 Sobic008G112100 Sobic003G397100--Sobic008G112100 Sobic010G143600 Sobic010G143600 Sobic003G397100--Sobic010G143600 Sobic001G448100 Sobic001G448100 Sobic003G397100--Sobic001G448100 Sobic008G031200 Sobic008G031200 Sobic003G397100--Sobic008G031200 Sobic009G116400 Sobic009G116400 Sobic006G262700--Sobic009G116400 Sobic006G262700--Sobic001G242300 Sobic009G155400 Sobic009G155400 Sobic006G262700--Sobic009G155400 Sobic008G163400 Sobic008G163400 Sobic006G262700--Sobic008G163400 Sobic006G262700--Sobic004G256900 Sobic010G068900 Sobic010G068900 Sobic006G262700--Sobic010G068900 Sobic010G190900 Sobic010G190900 Sobic006G262700--Sobic010G190900 Sobic004G241000 Sobic004G241000 Sobic006G262700--Sobic004G241000 Sobic007G087900 Sobic007G087900 Sobic006G262700--Sobic007G087900 Sobic006G127200 Sobic006G127200 Sobic002G123600--Sobic006G127200 Sobic008G090400 Sobic008G090400 Sobic002G123600--Sobic008G090400 Sobic004G306100 Sobic004G306100 Sobic002G123600--Sobic004G306100 Sobic002G095300 Sobic002G095300 Sobic002G123600--Sobic002G095300 Sobic002G271400 Sobic002G271400 Sobic002G123600--Sobic002G271400 Sobic002G123600--Sobic003G397100 Sobic002G123600--Sobic001G242300 Sobic003G411700 Sobic003G411700 Sobic002G123600--Sobic003G411700 Sobic004G129500 Sobic004G129500 Sobic002G123600--Sobic004G129500 Sobic003G184300 Sobic003G184300 Sobic004G256900--Sobic003G184300 Sobic004G256900--Sobic004G241000 Sobic004G256900--Sobic010G068900 Sobic002G172500 Sobic002G172500 Sobic004G256900--Sobic002G172500 Sobic006G069100 Sobic006G069100 Sobic004G256900--Sobic006G069100 Sobic006G262800 Sobic006G262800 Sobic004G256900--Sobic006G262800 Sobic004G256900--Sobic010G190900 Sobic001G478900 Sobic001G478900 Sobic004G256900--Sobic001G478900 Sobic004G256900--Sobic008G163400 Sobic001G079900 Sobic001G079900 Sobic008G169400--Sobic001G079900 Sobic003G153900 Sobic003G153900 Sobic008G169400--Sobic003G153900 Sobic007G031300 Sobic007G031300 Sobic008G169400--Sobic007G031300 Sobic009G141700 Sobic009G141700 Sobic008G169400--Sobic009G141700 Sobic002G370400 Sobic002G370400 Sobic008G169400--Sobic002G370400 Sobic001G494100 Sobic001G494100 Sobic008G169400--Sobic001G494100 Sobic002G293700 Sobic002G293700 Sobic008G169400--Sobic002G293700 Sobic009G158900 Sobic009G158900 Sobic008G169400--Sobic009G158900 Sobic008G169400--Sobic003G397100 Sobic003G259600 Sobic003G259600 Sobic003G331000--Sobic003G259600 Sobic009G122900 Sobic009G122900 Sobic003G331000--Sobic009G122900 Sobic003G028400 Sobic003G028400 Sobic003G331000--Sobic003G028400 Sobic003G331000--Sobic002G123600 Sobic001G123600 Sobic001G123600 Sobic003G331000--Sobic001G123600 Sobic003G331000--Sobic001G242300 Sobic005G160200 Sobic005G160200 Sobic003G331000--Sobic005G160200 Sobic003G298900 Sobic003G298900 Sobic003G331000--Sobic003G298900 Sobic003G360300 Sobic003G360300 Sobic003G331000--Sobic003G360300 Sobic002G192900 Sobic002G192900 Sobic001G361200--Sobic002G192900 Sobic001G154300 Sobic001G154300 Sobic001G361200--Sobic001G154300 Sobic001G361200--Sobic003G184300 Sobic004G328300 Sobic004G328300 Sobic001G361200--Sobic004G328300 Sobic001G296800 Sobic001G296800 Sobic001G361200--Sobic001G296800 Sobic003G315700 Sobic003G315700 Sobic001G361200--Sobic003G315700 Sobic006G095000 Sobic006G095000 Sobic001G361200--Sobic006G095000 Sobic001G361200--Sobic003G411700 Sobic001G361200--Sobic004G306100 Sobic002G173400 Sobic002G173400 Sobic009G120400--Sobic002G173400 Sobic002G426100 Sobic002G426100 Sobic009G120400--Sobic002G426100 Sobic007G034200 Sobic007G034200 Sobic009G120400--Sobic007G034200 Sobic003G194800 Sobic003G194800 Sobic009G120400--Sobic003G194800 Sobic004G215600 Sobic004G215600 Sobic009G120400--Sobic004G215600 Sobic007G105700 Sobic007G105700 Sobic009G120400--Sobic007G105700 Sobic003G299500 Sobic003G299500 Sobic009G120400--Sobic003G299500 Sobic007G186400 Sobic007G186400 Sobic009G120400--Sobic007G186400 Sobic001G051400 Sobic001G051400 Sobic009G120400--Sobic001G051400 Sobic005G123400 Sobic005G123400 Sobic006G237500--Sobic005G123400 Sobic003G393200 Sobic003G393200 Sobic006G237500--Sobic003G393200 Sobic007G030100 Sobic007G030100 Sobic006G237500--Sobic007G030100 Sobic010G112600 Sobic010G112600 Sobic006G237500--Sobic010G112600 Sobic004G353300 Sobic004G353300 Sobic006G237500--Sobic004G353300 Sobic001G052100 Sobic001G052100 Sobic006G237500--Sobic001G052100 Sobic006G237500--Sobic001G051400 Sobic006G237500--Sobic003G194800 Sobic006G237500--Sobic004G215600
Octagon: transcription factors


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