Gene annotation
Transcriptome id Sobic.009G122900.1
Synonym Sb09g019070
Functional annotation alpha 1,3-xylosyltransferase, putative, expressed
UniProt C5YXE8
Pfam PF03407
Panther DB PTHR10994 PTHR10994:SF60
NCBI CDD -
KEGG Orthology K11714; rhamnogalacturonan II specific xylosyltransferase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G01220 : Nucleotide-diphospho-sugar transferase family protein
RAP-DB (Rice) LOC_Os05g32120.1 : alpha 1,3-xylosyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a043531
Brachypodium KQK06530
Barley HORVU4Hr1G027400.5 , HORVU4Hr1G027400.4 , HORVU4Hr1G027400.7 , HORVU4Hr1G027400.6 , HORVU4Hr1G027400.1 , HORVU4Hr1G027400.3 , HORVU4Hr1G027400.2 , HORVU4Hr1G027400.9 , HORVU4Hr1G027400.8 , HORVU2Hr1G014980.8 , HORVU2Hr1G014980.9 , HORVU2Hr1G014980.4 , HORVU2Hr1G014980.5 , HORVU2Hr1G014980.6 , HORVU2Hr1G014980.7 , HORVU2Hr1G014980.1 , HORVU2Hr1G014980.2 , HORVU2Hr1G014980.3 , HORVU4Hr1G027400.11 , HORVU4Hr1G027400.20 , HORVU4Hr1G027400.21 , HORVU4Hr1G027400.10 , HORVU4Hr1G027400.13 , HORVU4Hr1G027400.12 , HORVU4Hr1G027400.15 , HORVU4Hr1G027400.14 , HORVU4Hr1G027400.16 , HORVU4Hr1G027400.19
Wheat TraesCS1A02G241700 , TraesCS1D02G241600 , TraesCS1B02G253400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G304800 OsRhmbd4 - Putative Rhomboid homologue, expressed -
2 Sobic.003G331000 exostosin family domain containing protein, expressed -
3 Sobic.008G125100 Mur ligase family protein, putative, expressed -
4 Sobic.001G242300 expressed protein -
5 Sobic.003G028400 OsFBX234 - F-box domain containing protein, expressed -
6 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
7 Sobic.003G298900 1,3-beta-glucan synthase component, putative, expressed K11000: callose synthase
8 Sobic.005G064100 expressed protein -
9 Sobic.005G160200 sialyltransferase family domain containing protein, expressed -
10 Sobic.001G361200 expressed protein -
11 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
12 Sobic.003G411700 heat shock protein DnaJ, putative, expressed -
13 Sobic.007G172600 dihydroneopterin aldolase, putative, expressed K01633: 7,8-dihydroneopterin aldolase/epimerase/oxygenase
14 Sobic.001G115500 importin-alpha re-exporter, putative, expressed K18423: CSE1, CAS, exportin-2 (importin alpha re-exporter)
15 Sobic.006G033101 - K14401: CPSF1, cleavage and polyadenylation specificity factor subunit 1
16 Sobic.008G084401 - -
17 Sobic.002G123600 expressed protein -
18 Sobic.001G097400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphatidylinositol kinase, putative, expressed -
19 Sobic.003G077500 expressed protein -
20 Sobic.001G051400 aminoacyl-tRNA synthetase, putative, expressed -


Gene co-expression network
sample Sobic009G122900 Sobic009G122900 Sobic003G304800 Sobic003G304800 Sobic009G122900--Sobic003G304800 Sobic003G331000 Sobic003G331000 Sobic009G122900--Sobic003G331000 Sobic008G125100 Sobic008G125100 Sobic009G122900--Sobic008G125100 Sobic001G242300 Sobic001G242300 Sobic009G122900--Sobic001G242300 Sobic003G028400 Sobic003G028400 Sobic009G122900--Sobic003G028400 Sobic001G296800 Sobic001G296800 Sobic009G122900--Sobic001G296800 Sobic003G298900 Sobic003G298900 Sobic009G122900--Sobic003G298900 Sobic005G064100 Sobic005G064100 Sobic009G122900--Sobic005G064100 Sobic005G160200 Sobic005G160200 Sobic009G122900--Sobic005G160200 Sobic003G304800--Sobic009G122900 Sobic007G010200 Sobic007G010200 Sobic003G304800--Sobic007G010200 Sobic001G472100 Sobic001G472100 Sobic003G304800--Sobic001G472100 Sobic008G112100 Sobic008G112100 Sobic003G304800--Sobic008G112100 Sobic003G304800--Sobic003G331000 Sobic007G036800 Sobic007G036800 Sobic003G304800--Sobic007G036800 Sobic009G060400 Sobic009G060400 Sobic003G304800--Sobic009G060400 Sobic003G304800--Sobic005G160200 Sobic001G425200 Sobic001G425200 Sobic003G304800--Sobic001G425200 Sobic003G259600 Sobic003G259600 Sobic003G331000--Sobic003G259600 Sobic003G331000--Sobic009G122900 Sobic003G331000--Sobic003G028400 Sobic002G123600 Sobic002G123600 Sobic003G331000--Sobic002G123600 Sobic001G123600 Sobic001G123600 Sobic003G331000--Sobic001G123600 Sobic003G331000--Sobic001G242300 Sobic003G331000--Sobic005G160200 Sobic003G331000--Sobic003G298900 Sobic003G360300 Sobic003G360300 Sobic003G331000--Sobic003G360300 Sobic008G125100--Sobic009G122900 Sobic001G315400 Sobic001G315400 Sobic008G125100--Sobic001G315400 Sobic007G000400 Sobic007G000400 Sobic008G125100--Sobic007G000400 Sobic004G128200 Sobic004G128200 Sobic008G125100--Sobic004G128200 Sobic001G236800 Sobic001G236800 Sobic008G125100--Sobic001G236800 Sobic008G125100--Sobic003G304800 Sobic007G172600 Sobic007G172600 Sobic008G125100--Sobic007G172600 Sobic004G178400 Sobic004G178400 Sobic008G125100--Sobic004G178400 Sobic002G380100 Sobic002G380100 Sobic008G125100--Sobic002G380100 Sobic003G397100 Sobic003G397100 Sobic001G242300--Sobic003G397100 Sobic006G262700 Sobic006G262700 Sobic001G242300--Sobic006G262700 Sobic001G242300--Sobic002G123600 Sobic004G256900 Sobic004G256900 Sobic001G242300--Sobic004G256900 Sobic008G169400 Sobic008G169400 Sobic001G242300--Sobic008G169400 Sobic001G242300--Sobic003G331000 Sobic001G361200 Sobic001G361200 Sobic001G242300--Sobic001G361200 Sobic009G120400 Sobic009G120400 Sobic001G242300--Sobic009G120400 Sobic006G237500 Sobic006G237500 Sobic001G242300--Sobic006G237500 Sobic004G129500 Sobic004G129500 Sobic003G028400--Sobic004G129500 Sobic003G028400--Sobic003G331000 Sobic003G028400--Sobic003G259600 Sobic003G028400--Sobic001G123600 Sobic007G031300 Sobic007G031300 Sobic003G028400--Sobic007G031300 Sobic003G028400--Sobic002G123600 Sobic001G465500 Sobic001G465500 Sobic003G028400--Sobic001G465500 Sobic007G030600 Sobic007G030600 Sobic003G028400--Sobic007G030600 Sobic003G028400--Sobic001G242300 Sobic009G212100 Sobic009G212100 Sobic001G296800--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic001G296800--Sobic004G315700 Sobic010G103500 Sobic010G103500 Sobic001G296800--Sobic010G103500 Sobic001G487200 Sobic001G487200 Sobic001G296800--Sobic001G487200 Sobic001G296800--Sobic004G129500 Sobic001G296800--Sobic001G361200 Sobic002G370400 Sobic002G370400 Sobic001G296800--Sobic002G370400 Sobic001G212600 Sobic001G212600 Sobic001G296800--Sobic001G212600 Sobic009G052100 Sobic009G052100 Sobic001G296800--Sobic009G052100 Sobic002G006100 Sobic002G006100 Sobic003G298900--Sobic002G006100 Sobic001G540700 Sobic001G540700 Sobic003G298900--Sobic001G540700 Sobic001G123100 Sobic001G123100 Sobic003G298900--Sobic001G123100 Sobic009G254000 Sobic009G254000 Sobic003G298900--Sobic009G254000 Sobic009G005700 Sobic009G005700 Sobic003G298900--Sobic009G005700 Sobic003G298900--Sobic005G064100 Sobic002G253900 Sobic002G253900 Sobic003G298900--Sobic002G253900 Sobic003G411700 Sobic003G411700 Sobic003G298900--Sobic003G411700 Sobic007G197100 Sobic007G197100 Sobic003G298900--Sobic007G197100 Sobic005G064100--Sobic003G298900 Sobic008G174966 Sobic008G174966 Sobic005G064100--Sobic008G174966 Sobic001G507200 Sobic001G507200 Sobic005G064100--Sobic001G507200 Sobic001G437500 Sobic001G437500 Sobic005G064100--Sobic001G437500 Sobic003G409600 Sobic003G409600 Sobic005G064100--Sobic003G409600 Sobic004G093400 Sobic004G093400 Sobic005G064100--Sobic004G093400 Sobic002G320600 Sobic002G320600 Sobic005G064100--Sobic002G320600 Sobic006G071628 Sobic006G071628 Sobic005G064100--Sobic006G071628 Sobic009G061000 Sobic009G061000 Sobic005G064100--Sobic009G061000 Sobic004G014100 Sobic004G014100 Sobic005G160200--Sobic004G014100 Sobic005G160200--Sobic003G411700 Sobic003G343200 Sobic003G343200 Sobic005G160200--Sobic003G343200 Sobic006G091850 Sobic006G091850 Sobic005G160200--Sobic006G091850 Sobic002G315100 Sobic002G315100 Sobic005G160200--Sobic002G315100 Sobic010G038900 Sobic010G038900 Sobic005G160200--Sobic010G038900 Sobic010G257500 Sobic010G257500 Sobic005G160200--Sobic010G257500 Sobic001G534400 Sobic001G534400 Sobic005G160200--Sobic001G534400 Sobic004G350200 Sobic004G350200 Sobic005G160200--Sobic004G350200
Octagon: transcription factors


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