Gene annotation
Transcriptome id Sobic.001G097400.1
Synonym Sb01g008710
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phosphatidylinositol kinase, putative, expressed
UniProt A0A1B6QI56
Pfam PF00400
Panther DB PTHR13211
NCBI CDD KOG2919; Guanine nucleotide-binding protein
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G21520 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os03g52794.1 : phosphatidylinositol kinase, putative, expressed
MaizeGDB (Corn) Zm00025a008058
Brachypodium KQK13319 , KQK13320
Barley HORVU4Hr1G011440.2 , HORVU4Hr1G011440.3 , HORVU4Hr1G011440.4 , HORVU4Hr1G011440.5 , HORVU4Hr1G011440.6 , HORVU1Hr1G041030.32 , HORVU1Hr1G041030.9 , HORVU1Hr1G041030.21 , HORVU1Hr1G041030.27 , HORVU1Hr1G041030.29 , HORVU5Hr1G058460.1 , HORVU5Hr1G058460.2 , HORVU5Hr1G058460.3 , HORVU1Hr1G041030.14 , HORVU1Hr1G041030.10 , HORVU1Hr1G041030.12 , HORVU1Hr1G041030.19
Wheat TraesCS4B02G068600 , TraesCS4B02G068600 , TraesCS4A02G246200 , TraesCS4A02G246200 , TraesCS4D02G067700
Populus -


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cDNA sequences
Sobic.001G097400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G235700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@translin, putative, expressed -
2 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A
3 Sobic.005G088900 AGAP007117-PA, putative, expressed -
4 Sobic.006G127500 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
5 Sobic.002G110500 expressed protein K14308: NUP54, nuclear pore complex protein Nup54
6 Sobic.003G098200 expressed protein -
7 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
8 Sobic.001G149100 vegetative storage protein, putative, expressed -
9 Sobic.006G251600 exosome complex exonuclease rrp4, putative, expressed K03679: RRP4, exosome complex component RRP4
10 Sobic.009G122900 alpha 1,3-xylosyltransferase, putative, expressed K11714: rhamnogalacturonan II specific xylosyltransferase
11 Sobic.009G228900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exosome complex exonuclease, putative, expressed K11600: RRP41, EXOSC4, exosome complex component RRP41
12 Sobic.010G250800 DNA binding protein, putative, expressed -
13 Sobic.003G235700 single-stranded DNA-binding protein, putative, expressed K03111: single-strand DNA-binding protein
14 Sobic.002G126800 tetratricopeptide repeat domain containing protein, expressed -
15 Sobic.006G072501 - -
16 Sobic.008G083400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@argininosuccinate synthase, chloroplast precursor, putative, expressed K01940: argG, argininosuccinate synthase
17 Sobic.009G253400 hyaluronan/mRNA binding family domain containing protein, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
18 Sobic.003G259600 ORC4 - Putative origin recognition complex subunit 4, expressed K02606: origin recognition complex subunit 4
19 Sobic.006G109400 pentatricopeptide, putative, expressed -
20 Sobic.007G069700 gar2, putative, expressed K11294: NCL, nucleolin


Gene co-expression network
sample Sobic001G097400 Sobic001G097400 Sobic001G235700 Sobic001G235700 Sobic001G097400--Sobic001G235700 Sobic001G436300 Sobic001G436300 Sobic001G097400--Sobic001G436300 Sobic005G088900 Sobic005G088900 Sobic001G097400--Sobic005G088900 Sobic006G127500 Sobic006G127500 Sobic001G097400--Sobic006G127500 Sobic002G110500 Sobic002G110500 Sobic001G097400--Sobic002G110500 Sobic003G098200 Sobic003G098200 Sobic001G097400--Sobic003G098200 Sobic003G432300 Sobic003G432300 Sobic001G097400--Sobic003G432300 Sobic001G149100 Sobic001G149100 Sobic001G097400--Sobic001G149100 Sobic006G251600 Sobic006G251600 Sobic001G097400--Sobic006G251600 Sobic001G235700--Sobic001G097400 Sobic001G235700--Sobic001G436300 Sobic004G208100 Sobic004G208100 Sobic001G235700--Sobic004G208100 Sobic004G190600 Sobic004G190600 Sobic001G235700--Sobic004G190600 Sobic001G440900 Sobic001G440900 Sobic001G235700--Sobic001G440900 Sobic002G303800 Sobic002G303800 Sobic001G235700--Sobic002G303800 Sobic002G133000 Sobic002G133000 Sobic001G235700--Sobic002G133000 Sobic004G343600 Sobic004G343600 Sobic001G235700--Sobic004G343600 Sobic001G235700--Sobic006G127500 Sobic001G436300--Sobic006G127500 Sobic001G436300--Sobic001G235700 Sobic001G115500 Sobic001G115500 Sobic001G436300--Sobic001G115500 Sobic003G274400 Sobic003G274400 Sobic001G436300--Sobic003G274400 Sobic001G008500 Sobic001G008500 Sobic001G436300--Sobic001G008500 Sobic006G245700 Sobic006G245700 Sobic001G436300--Sobic006G245700 Sobic001G436300--Sobic004G343600 Sobic002G317600 Sobic002G317600 Sobic001G436300--Sobic002G317600 Sobic001G436300--Sobic001G097400 Sobic001G199500 Sobic001G199500 Sobic005G088900--Sobic001G199500 Sobic009G191500 Sobic009G191500 Sobic005G088900--Sobic009G191500 Sobic009G176300 Sobic009G176300 Sobic005G088900--Sobic009G176300 Sobic004G215900 Sobic004G215900 Sobic005G088900--Sobic004G215900 Sobic008G068100 Sobic008G068100 Sobic005G088900--Sobic008G068100 Sobic005G088900--Sobic003G432300 Sobic003G144000 Sobic003G144000 Sobic005G088900--Sobic003G144000 Sobic005G088900--Sobic002G133000 Sobic002G003300 Sobic002G003300 Sobic005G088900--Sobic002G003300 Sobic006G127500--Sobic001G436300 Sobic001G157600 Sobic001G157600 Sobic006G127500--Sobic001G157600 Sobic006G127500--Sobic006G251600 Sobic003G028400 Sobic003G028400 Sobic006G127500--Sobic003G028400 Sobic006G127500--Sobic003G098200 Sobic006G127500--Sobic004G343600 Sobic006G127500--Sobic001G097400 Sobic006G127500--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic006G127500--Sobic001G107300 Sobic002G110500--Sobic005G088900 Sobic007G006800 Sobic007G006800 Sobic002G110500--Sobic007G006800 Sobic009G216500 Sobic009G216500 Sobic002G110500--Sobic009G216500 Sobic010G250800 Sobic010G250800 Sobic002G110500--Sobic010G250800 Sobic002G110500--Sobic001G097400 Sobic006G106200 Sobic006G106200 Sobic002G110500--Sobic006G106200 Sobic002G110500--Sobic001G199500 Sobic009G031500 Sobic009G031500 Sobic002G110500--Sobic009G031500 Sobic010G041000 Sobic010G041000 Sobic002G110500--Sobic010G041000 Sobic003G098200--Sobic006G127500 Sobic003G098200--Sobic001G097400 Sobic003G257200 Sobic003G257200 Sobic003G098200--Sobic003G257200 Sobic003G436600 Sobic003G436600 Sobic003G098200--Sobic003G436600 Sobic003G098200--Sobic001G436300 Sobic009G233700 Sobic009G233700 Sobic003G098200--Sobic009G233700 Sobic003G098200--Sobic001G235700 Sobic003G425100 Sobic003G425100 Sobic003G098200--Sobic003G425100 Sobic004G227100 Sobic004G227100 Sobic003G098200--Sobic004G227100 Sobic002G126800 Sobic002G126800 Sobic003G432300--Sobic002G126800 Sobic005G028100 Sobic005G028100 Sobic003G432300--Sobic005G028100 Sobic003G432300--Sobic005G088900 Sobic002G132600 Sobic002G132600 Sobic003G432300--Sobic002G132600 Sobic001G373000 Sobic001G373000 Sobic003G432300--Sobic001G373000 Sobic003G432300--Sobic003G144000 Sobic008G000600 Sobic008G000600 Sobic003G432300--Sobic008G000600 Sobic002G043000 Sobic002G043000 Sobic003G432300--Sobic002G043000 Sobic004G038100 Sobic004G038100 Sobic003G432300--Sobic004G038100 Sobic001G347100 Sobic001G347100 Sobic001G149100--Sobic001G347100 Sobic003G299200 Sobic003G299200 Sobic001G149100--Sobic003G299200 Sobic010G252700 Sobic010G252700 Sobic001G149100--Sobic010G252700 Sobic008G179000 Sobic008G179000 Sobic001G149100--Sobic008G179000 Sobic004G241000 Sobic004G241000 Sobic001G149100--Sobic004G241000 Sobic008G163400 Sobic008G163400 Sobic001G149100--Sobic008G163400 Sobic003G239000 Sobic003G239000 Sobic001G149100--Sobic003G239000 Sobic006G069100 Sobic006G069100 Sobic001G149100--Sobic006G069100 Sobic002G267600 Sobic002G267600 Sobic001G149100--Sobic002G267600 Sobic009G071700 Sobic009G071700 Sobic006G251600--Sobic009G071700 Sobic002G365900 Sobic002G365900 Sobic006G251600--Sobic002G365900 Sobic006G225400 Sobic006G225400 Sobic006G251600--Sobic006G225400 Sobic006G251600--Sobic001G008500 Sobic008G083400 Sobic008G083400 Sobic006G251600--Sobic008G083400 Sobic006G198600 Sobic006G198600 Sobic006G251600--Sobic006G198600 Sobic010G205900 Sobic010G205900 Sobic006G251600--Sobic010G205900 Sobic004G173100 Sobic004G173100 Sobic006G251600--Sobic004G173100 Sobic001G371100 Sobic001G371100 Sobic006G251600--Sobic001G371100
Octagon: transcription factors


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