Gene annotation
Transcriptome id Sobic.003G098200.1
Synonym Sb03g008220
Functional annotation expressed protein
UniProt C5XEV0
Pfam -
Panther DB PTHR37181
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G18850 : -
RAP-DB (Rice) LOC_Os01g02170.2 : expressed protein
MaizeGDB (Corn) Zm00025a023744 , Zm00025a035452
Brachypodium KQK02375
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G127500 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
2 Sobic.001G097400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphatidylinositol kinase, putative, expressed -
3 Sobic.003G257200 expressed protein -
4 Sobic.003G436600 expressed protein -
5 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A
6 Sobic.009G233700 CobW/P47K family protein, putative, expressed K03189: urease accessory protein
7 Sobic.001G235700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@translin, putative, expressed -
8 Sobic.003G425100 "Protein OSB3, chloroplastic/mitochondrial"(PubMedID : 24906815)@single-stranded DNA-binding protein, putative, expressed -
9 Sobic.004G227100 survival motor neuron containing protein, expressed K13130: GEMIN2, gem associated protein 2
10 Sobic.002G365400 PPR repeat domain containing protein, putative, expressed -
11 Sobic.003G235700 single-stranded DNA-binding protein, putative, expressed K03111: single-strand DNA-binding protein
12 Sobic.005G187400 A49-like RNA polymerase I associated factor family protein, expressed K03005: RPA49, DNA-directed RNA polymerase I subunit RPA49
13 Sobic.005G178700 OsFBX135 - F-box domain containing protein, expressed -
14 Sobic.001G107300 WD repeat-containing protein 5, putative, expressed K14963: WDR5, SWD3, COMPASS component SWD3
15 Sobic.002G353500 ruvB-like 2, putative, expressed K11338: RUVBL2, RVB2, RuvB-like protein 2
16 Sobic.009G228900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@exosome complex exonuclease, putative, expressed K11600: RRP41, EXOSC4, exosome complex component RRP41
17 Sobic.004G036700 arginine N-methyltransferase 5, putative, expressed K02516: PRMT5, type II protein arginine methyltransferase
18 Sobic.004G272400 AAA-type ATPase family protein, putative, expressed K17681: ATPase family AAA domain-containing protein 3A/B
19 Sobic.009G253400 hyaluronan/mRNA binding family domain containing protein, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
20 Sobic.007G219200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4


Gene co-expression network
sample Sobic003G098200 Sobic003G098200 Sobic006G127500 Sobic006G127500 Sobic003G098200--Sobic006G127500 Sobic001G097400 Sobic001G097400 Sobic003G098200--Sobic001G097400 Sobic003G257200 Sobic003G257200 Sobic003G098200--Sobic003G257200 Sobic003G436600 Sobic003G436600 Sobic003G098200--Sobic003G436600 Sobic001G436300 Sobic001G436300 Sobic003G098200--Sobic001G436300 Sobic009G233700 Sobic009G233700 Sobic003G098200--Sobic009G233700 Sobic001G235700 Sobic001G235700 Sobic003G098200--Sobic001G235700 Sobic003G425100 Sobic003G425100 Sobic003G098200--Sobic003G425100 Sobic004G227100 Sobic004G227100 Sobic003G098200--Sobic004G227100 Sobic006G127500--Sobic001G436300 Sobic001G157600 Sobic001G157600 Sobic006G127500--Sobic001G157600 Sobic006G251600 Sobic006G251600 Sobic006G127500--Sobic006G251600 Sobic003G028400 Sobic003G028400 Sobic006G127500--Sobic003G028400 Sobic006G127500--Sobic003G098200 Sobic004G343600 Sobic004G343600 Sobic006G127500--Sobic004G343600 Sobic006G127500--Sobic001G097400 Sobic006G127500--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic006G127500--Sobic001G107300 Sobic001G097400--Sobic001G235700 Sobic001G097400--Sobic001G436300 Sobic005G088900 Sobic005G088900 Sobic001G097400--Sobic005G088900 Sobic001G097400--Sobic006G127500 Sobic002G110500 Sobic002G110500 Sobic001G097400--Sobic002G110500 Sobic001G097400--Sobic003G098200 Sobic003G432300 Sobic003G432300 Sobic001G097400--Sobic003G432300 Sobic001G149100 Sobic001G149100 Sobic001G097400--Sobic001G149100 Sobic001G097400--Sobic006G251600 Sobic003G257200--Sobic003G098200 Sobic009G088600 Sobic009G088600 Sobic003G257200--Sobic009G088600 Sobic003G257200--Sobic001G097400 Sobic003G257200--Sobic006G127500 Sobic002G267600 Sobic002G267600 Sobic003G257200--Sobic002G267600 Sobic003G257200--Sobic004G343600 Sobic010G092801 Sobic010G092801 Sobic003G257200--Sobic010G092801 Sobic002G183300 Sobic002G183300 Sobic003G257200--Sobic002G183300 Sobic009G253400 Sobic009G253400 Sobic003G257200--Sobic009G253400 Sobic009G163600 Sobic009G163600 Sobic003G436600--Sobic009G163600 Sobic003G436600--Sobic003G425100 Sobic002G177500 Sobic002G177500 Sobic003G436600--Sobic002G177500 Sobic004G027400 Sobic004G027400 Sobic003G436600--Sobic004G027400 Sobic007G059700 Sobic007G059700 Sobic003G436600--Sobic007G059700 Sobic001G368300 Sobic001G368300 Sobic003G436600--Sobic001G368300 Sobic003G436600--Sobic005G088900 Sobic003G361400 Sobic003G361400 Sobic003G436600--Sobic003G361400 Sobic001G453500 Sobic001G453500 Sobic003G436600--Sobic001G453500 Sobic001G436300--Sobic006G127500 Sobic001G436300--Sobic001G235700 Sobic001G115500 Sobic001G115500 Sobic001G436300--Sobic001G115500 Sobic003G274400 Sobic003G274400 Sobic001G436300--Sobic003G274400 Sobic001G008500 Sobic001G008500 Sobic001G436300--Sobic001G008500 Sobic006G245700 Sobic006G245700 Sobic001G436300--Sobic006G245700 Sobic001G436300--Sobic004G343600 Sobic002G317600 Sobic002G317600 Sobic001G436300--Sobic002G317600 Sobic001G436300--Sobic001G097400 Sobic001G081400 Sobic001G081400 Sobic009G233700--Sobic001G081400 Sobic002G117200 Sobic002G117200 Sobic009G233700--Sobic002G117200 Sobic009G233700--Sobic003G098200 Sobic001G132900 Sobic001G132900 Sobic009G233700--Sobic001G132900 Sobic001G136500 Sobic001G136500 Sobic009G233700--Sobic001G136500 Sobic002G353500 Sobic002G353500 Sobic009G233700--Sobic002G353500 Sobic001G188700 Sobic001G188700 Sobic009G233700--Sobic001G188700 Sobic004G018400 Sobic004G018400 Sobic009G233700--Sobic004G018400 Sobic009G065200 Sobic009G065200 Sobic009G233700--Sobic009G065200 Sobic001G235700--Sobic001G097400 Sobic001G235700--Sobic001G436300 Sobic004G208100 Sobic004G208100 Sobic001G235700--Sobic004G208100 Sobic004G190600 Sobic004G190600 Sobic001G235700--Sobic004G190600 Sobic001G440900 Sobic001G440900 Sobic001G235700--Sobic001G440900 Sobic002G303800 Sobic002G303800 Sobic001G235700--Sobic002G303800 Sobic002G133000 Sobic002G133000 Sobic001G235700--Sobic002G133000 Sobic001G235700--Sobic004G343600 Sobic001G235700--Sobic006G127500 Sobic003G425100--Sobic009G163600 Sobic005G028100 Sobic005G028100 Sobic003G425100--Sobic005G028100 Sobic004G027300 Sobic004G027300 Sobic003G425100--Sobic004G027300 Sobic006G225400 Sobic006G225400 Sobic003G425100--Sobic006G225400 Sobic010G224700 Sobic010G224700 Sobic003G425100--Sobic010G224700 Sobic009G071700 Sobic009G071700 Sobic003G425100--Sobic009G071700 Sobic003G425100--Sobic003G436600 Sobic006G198600 Sobic006G198600 Sobic003G425100--Sobic006G198600 Sobic004G036700 Sobic004G036700 Sobic003G425100--Sobic004G036700 Sobic005G178700 Sobic005G178700 Sobic004G227100--Sobic005G178700 Sobic008G056900 Sobic008G056900 Sobic004G227100--Sobic008G056900 Sobic006G271900 Sobic006G271900 Sobic004G227100--Sobic006G271900 Sobic007G185600 Sobic007G185600 Sobic004G227100--Sobic007G185600 Sobic004G226900 Sobic004G226900 Sobic004G227100--Sobic004G226900 Sobic010G015700 Sobic010G015700 Sobic004G227100--Sobic010G015700 Sobic004G077000 Sobic004G077000 Sobic004G227100--Sobic004G077000 Sobic002G399200 Sobic002G399200 Sobic004G227100--Sobic002G399200 Sobic004G227100--Sobic004G036700
Octagon: transcription factors


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