Gene annotation
Transcriptome id Sobic.001G235700.2,Sobic.001G235700.1
Synonym Sb01g020820
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
translin, putative, expressed
UniProt C5X0F4 , A0A1Z5S706
Pfam PF01997
Panther DB PTHR10741 PTHR10741:SF2
NCBI CDD KOG3067; Translin family protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37020 : Translin family protein
RAP-DB (Rice) LOC_Os10g30640.1 : translin, putative, expressed
MaizeGDB (Corn) Zm00025a017718
Brachypodium KQJ96889
Barley HORVU1Hr1G037340.2 , HORVU1Hr1G037340.3 , HORVU1Hr1G037340.1 , HORVU1Hr1G037340.4 , HORVU1Hr1G037340.5
Wheat TraesCS1D02G140600 , TraesCS1B02G158100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G097400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphatidylinositol kinase, putative, expressed -
2 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A
3 Sobic.004G208100 expressed protein -
4 Sobic.004G190600 SET, putative, expressed K11290: SET, TAF1, template-activating factor I
5 Sobic.001G440900 LSM domain containing protein, expressed K11088: SNRPD3, small nuclear ribonucleoprotein D3
6 Sobic.002G303800 expressed protein -
7 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
8 Sobic.004G343600 3-5 exoribonuclease CSL4, putative, expressed K07573: CSL4, exosome complex component CSL4
9 Sobic.006G127500 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
10 Sobic.005G088900 AGAP007117-PA, putative, expressed -
11 Sobic.010G021900 rad1, putative, expressed K02830: HRAD1, cell cycle checkpoint protein
12 Sobic.002G110500 expressed protein K14308: NUP54, nuclear pore complex protein Nup54
13 Sobic.001G369800 monocopper oxidase, putative, expressed -
14 Sobic.001G051300 BEE 1, putative, expressed -
15 Sobic.002G317600 endoribonuclease, putative, expressed -
16 Sobic.010G032700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyltransferase domain containing protein, expressed K11434: type I protein arginine methyltransferase
17 Sobic.007G006800 pentatricopeptide, putative, expressed -
18 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
19 Sobic.001G146900 expressed protein -
20 Sobic.001G107300 WD repeat-containing protein 5, putative, expressed K14963: WDR5, SWD3, COMPASS component SWD3


Gene co-expression network
sample Sobic001G235700 Sobic001G235700 Sobic001G097400 Sobic001G097400 Sobic001G235700--Sobic001G097400 Sobic001G436300 Sobic001G436300 Sobic001G235700--Sobic001G436300 Sobic004G208100 Sobic004G208100 Sobic001G235700--Sobic004G208100 Sobic004G190600 Sobic004G190600 Sobic001G235700--Sobic004G190600 Sobic001G440900 Sobic001G440900 Sobic001G235700--Sobic001G440900 Sobic002G303800 Sobic002G303800 Sobic001G235700--Sobic002G303800 Sobic002G133000 Sobic002G133000 Sobic001G235700--Sobic002G133000 Sobic004G343600 Sobic004G343600 Sobic001G235700--Sobic004G343600 Sobic006G127500 Sobic006G127500 Sobic001G235700--Sobic006G127500 Sobic001G097400--Sobic001G235700 Sobic001G097400--Sobic001G436300 Sobic005G088900 Sobic005G088900 Sobic001G097400--Sobic005G088900 Sobic001G097400--Sobic006G127500 Sobic002G110500 Sobic002G110500 Sobic001G097400--Sobic002G110500 Sobic003G098200 Sobic003G098200 Sobic001G097400--Sobic003G098200 Sobic003G432300 Sobic003G432300 Sobic001G097400--Sobic003G432300 Sobic001G149100 Sobic001G149100 Sobic001G097400--Sobic001G149100 Sobic006G251600 Sobic006G251600 Sobic001G097400--Sobic006G251600 Sobic001G436300--Sobic006G127500 Sobic001G436300--Sobic001G235700 Sobic001G115500 Sobic001G115500 Sobic001G436300--Sobic001G115500 Sobic003G274400 Sobic003G274400 Sobic001G436300--Sobic003G274400 Sobic001G008500 Sobic001G008500 Sobic001G436300--Sobic001G008500 Sobic006G245700 Sobic006G245700 Sobic001G436300--Sobic006G245700 Sobic001G436300--Sobic004G343600 Sobic002G317600 Sobic002G317600 Sobic001G436300--Sobic002G317600 Sobic001G436300--Sobic001G097400 Sobic010G021900 Sobic010G021900 Sobic004G208100--Sobic010G021900 Sobic003G444300 Sobic003G444300 Sobic004G208100--Sobic003G444300 Sobic004G208100--Sobic002G303800 Sobic001G238900 Sobic001G238900 Sobic004G208100--Sobic001G238900 Sobic004G208100--Sobic002G133000 Sobic001G169800 Sobic001G169800 Sobic004G208100--Sobic001G169800 Sobic001G122100 Sobic001G122100 Sobic004G208100--Sobic001G122100 Sobic004G208100--Sobic001G235700 Sobic002G246900 Sobic002G246900 Sobic004G208100--Sobic002G246900 Sobic004G190600--Sobic001G235700 Sobic004G190600--Sobic002G303800 Sobic004G190600--Sobic001G440900 Sobic004G190600--Sobic004G208100 Sobic001G081700 Sobic001G081700 Sobic004G190600--Sobic001G081700 Sobic010G032700 Sobic010G032700 Sobic004G190600--Sobic010G032700 Sobic010G054600 Sobic010G054600 Sobic004G190600--Sobic010G054600 Sobic001G146900 Sobic001G146900 Sobic004G190600--Sobic001G146900 Sobic001G371100 Sobic001G371100 Sobic004G190600--Sobic001G371100 Sobic002G351100 Sobic002G351100 Sobic001G440900--Sobic002G351100 Sobic001G300400 Sobic001G300400 Sobic001G440900--Sobic001G300400 Sobic010G001800 Sobic010G001800 Sobic001G440900--Sobic010G001800 Sobic001G289900 Sobic001G289900 Sobic001G440900--Sobic001G289900 Sobic004G327600 Sobic004G327600 Sobic001G440900--Sobic004G327600 Sobic001G440900--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic001G440900--Sobic001G107300 Sobic002G289800 Sobic002G289800 Sobic001G440900--Sobic002G289800 Sobic007G153700 Sobic007G153700 Sobic001G440900--Sobic007G153700 Sobic002G303800--Sobic003G444300 Sobic006G120600 Sobic006G120600 Sobic002G303800--Sobic006G120600 Sobic002G303800--Sobic001G169800 Sobic003G183700 Sobic003G183700 Sobic002G303800--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic002G303800--Sobic010G103700 Sobic002G303800--Sobic001G146900 Sobic003G179500 Sobic003G179500 Sobic002G303800--Sobic003G179500 Sobic006G051000 Sobic006G051000 Sobic002G303800--Sobic006G051000 Sobic001G083300 Sobic001G083300 Sobic002G303800--Sobic001G083300 Sobic002G133000--Sobic002G303800 Sobic007G043400 Sobic007G043400 Sobic002G133000--Sobic007G043400 Sobic002G133000--Sobic005G088900 Sobic004G330600 Sobic004G330600 Sobic002G133000--Sobic004G330600 Sobic002G133000--Sobic004G208100 Sobic002G133000--Sobic006G120600 Sobic002G133000--Sobic001G371100 Sobic002G133000--Sobic010G021900 Sobic004G047500 Sobic004G047500 Sobic002G133000--Sobic004G047500 Sobic004G343600--Sobic001G107300 Sobic002G386300 Sobic002G386300 Sobic004G343600--Sobic002G386300 Sobic006G013900 Sobic006G013900 Sobic004G343600--Sobic006G013900 Sobic004G343600--Sobic010G032700 Sobic004G036800 Sobic004G036800 Sobic004G343600--Sobic004G036800 Sobic004G343600--Sobic001G436300 Sobic004G343600--Sobic006G127500 Sobic001G412500 Sobic001G412500 Sobic004G343600--Sobic001G412500 Sobic002G184900 Sobic002G184900 Sobic004G343600--Sobic002G184900 Sobic006G127500--Sobic001G436300 Sobic001G157600 Sobic001G157600 Sobic006G127500--Sobic001G157600 Sobic006G127500--Sobic006G251600 Sobic003G028400 Sobic003G028400 Sobic006G127500--Sobic003G028400 Sobic006G127500--Sobic003G098200 Sobic006G127500--Sobic004G343600 Sobic006G127500--Sobic001G097400 Sobic006G127500--Sobic001G235700 Sobic006G127500--Sobic001G107300
Octagon: transcription factors


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