Gene annotation
Transcriptome id Sobic.010G032700.1
Synonym PRMT10, ATPRMT10, Sb10g002950
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
methyltransferase domain containing protein, expressed
UniProt C5Z3U7
Pfam PF05185
Panther DB PTHR11006 PTHR11006:SF68
NCBI CDD KOG1499; Protein arginine N-methyltransferase PRMT1 and related enzymes
KEGG Orthology K11434; type I protein arginine methyltransferase
Gene Ontology GO:0008168; methyltransferase activity GO:0006479protein methylation


Orthologs (automatic annotation)
TAIR AT1G04870 : protein arginine methyltransferase 10
RAP-DB (Rice) LOC_Os06g05090.1 : methyltransferase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041486
Brachypodium KQK19898 , KQK19897
Barley HORVU7Hr1G020620.3 , HORVU7Hr1G020620.2 , HORVU7Hr1G020620.1 , HORVU7Hr1G020620.6 , HORVU7Hr1G020620.5 , HORVU7Hr1G020620.4
Wheat TraesCS7D02G086300 , TraesCS7A02G090500 , TraesCS4A02G390400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G371100 nucleolar protein 5A, putative, expressed K14564: nucleolar protein 56
2 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
4 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
5 Sobic.004G343600 3-5 exoribonuclease CSL4, putative, expressed K07573: CSL4, exosome complex component CSL4
6 Sobic.002G054000 ribosomal protein L4, putative, expressed K02930: RP-L4e, large subunit ribosomal protein L4e
7 Sobic.002G319200 expressed protein K11490: condensin-2 complex subunit H2
8 Sobic.002G045100 LSM domain containing protein, expressed K11086: SNRPB, small nuclear ribonucleoprotein B and B'
9 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
10 Sobic.007G152900 POLE2A - Putative DNA polymerase epsilon complex subunit, expressed K02325: DNA polymerase epsilon subunit 2
11 Sobic.003G396600 down-regulated TF in developmental senescence(PubMedID : 27586543)@ZOS5-12 - C2H2 zinc finger protein, expressed -
12 Sobic.004G010700 expressed protein -
13 Sobic.002G303800 expressed protein -
14 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
15 Sobic.007G171200 dihydrodipicolinate reductase, putative, expressed K00215: 4-hydroxy-tetrahydrodipicolinate reductase
16 Sobic.002G101000 mitochondrial prohibitin complex protein 2, putative, expressed K17081: prohibitin 2
17 Sobic.010G134100 mitochondrial glycoprotein, putative, expressed K15414: complement component 1 Q subcomponent-binding protein, mitochondrial
18 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A
19 Sobic.001G081900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00133: aspartate-semialdehyde dehydrogenase
20 Sobic.007G079600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@FabA-like domain containing protein, expressed K02372: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase


Gene co-expression network
sample Sobic010G032700 Sobic010G032700 Sobic001G371100 Sobic001G371100 Sobic010G032700--Sobic001G371100 Sobic009G119700 Sobic009G119700 Sobic010G032700--Sobic009G119700 Sobic002G280700 Sobic002G280700 Sobic010G032700--Sobic002G280700 Sobic009G088200 Sobic009G088200 Sobic010G032700--Sobic009G088200 Sobic004G343600 Sobic004G343600 Sobic010G032700--Sobic004G343600 Sobic002G054000 Sobic002G054000 Sobic010G032700--Sobic002G054000 Sobic002G319200 Sobic002G319200 Sobic010G032700--Sobic002G319200 Sobic002G045100 Sobic002G045100 Sobic010G032700--Sobic002G045100 Sobic001G228200 Sobic001G228200 Sobic010G032700--Sobic001G228200 Sobic001G371100--Sobic010G032700 Sobic001G081900 Sobic001G081900 Sobic001G371100--Sobic001G081900 Sobic001G397000 Sobic001G397000 Sobic001G371100--Sobic001G397000 Sobic001G530800 Sobic001G530800 Sobic001G371100--Sobic001G530800 Sobic006G251600 Sobic006G251600 Sobic001G371100--Sobic006G251600 Sobic004G047200 Sobic004G047200 Sobic001G371100--Sobic004G047200 Sobic008G083400 Sobic008G083400 Sobic001G371100--Sobic008G083400 Sobic004G082700 Sobic004G082700 Sobic001G371100--Sobic004G082700 Sobic001G371100--Sobic001G228200 Sobic002G303800 Sobic002G303800 Sobic009G119700--Sobic002G303800 Sobic001G146900 Sobic001G146900 Sobic009G119700--Sobic001G146900 Sobic010G103700 Sobic010G103700 Sobic009G119700--Sobic010G103700 Sobic003G412800 Sobic003G412800 Sobic009G119700--Sobic003G412800 Sobic001G051300 Sobic001G051300 Sobic009G119700--Sobic001G051300 Sobic003G444300 Sobic003G444300 Sobic009G119700--Sobic003G444300 Sobic003G179500 Sobic003G179500 Sobic009G119700--Sobic003G179500 Sobic007G139500 Sobic007G139500 Sobic009G119700--Sobic007G139500 Sobic001G169800 Sobic001G169800 Sobic009G119700--Sobic001G169800 Sobic002G280700--Sobic009G088200 Sobic001G528600 Sobic001G528600 Sobic002G280700--Sobic001G528600 Sobic007G152900 Sobic007G152900 Sobic002G280700--Sobic007G152900 Sobic002G280700--Sobic010G032700 Sobic003G396600 Sobic003G396600 Sobic002G280700--Sobic003G396600 Sobic002G280700--Sobic001G371100 Sobic003G294100 Sobic003G294100 Sobic002G280700--Sobic003G294100 Sobic005G164700 Sobic005G164700 Sobic002G280700--Sobic005G164700 Sobic002G280700--Sobic001G397000 Sobic004G355500 Sobic004G355500 Sobic009G088200--Sobic004G355500 Sobic009G088200--Sobic002G280700 Sobic009G088200--Sobic007G152900 Sobic009G088200--Sobic003G396600 Sobic007G079600 Sobic007G079600 Sobic009G088200--Sobic007G079600 Sobic001G078600 Sobic001G078600 Sobic009G088200--Sobic001G078600 Sobic001G103000 Sobic001G103000 Sobic009G088200--Sobic001G103000 Sobic009G088200--Sobic010G032700 Sobic005G047100 Sobic005G047100 Sobic009G088200--Sobic005G047100 Sobic001G107300 Sobic001G107300 Sobic004G343600--Sobic001G107300 Sobic002G386300 Sobic002G386300 Sobic004G343600--Sobic002G386300 Sobic006G013900 Sobic006G013900 Sobic004G343600--Sobic006G013900 Sobic004G343600--Sobic010G032700 Sobic004G036800 Sobic004G036800 Sobic004G343600--Sobic004G036800 Sobic001G436300 Sobic001G436300 Sobic004G343600--Sobic001G436300 Sobic006G127500 Sobic006G127500 Sobic004G343600--Sobic006G127500 Sobic001G412500 Sobic001G412500 Sobic004G343600--Sobic001G412500 Sobic002G184900 Sobic002G184900 Sobic004G343600--Sobic002G184900 Sobic008G135000 Sobic008G135000 Sobic002G054000--Sobic008G135000 Sobic009G233400 Sobic009G233400 Sobic002G054000--Sobic009G233400 Sobic001G058900 Sobic001G058900 Sobic002G054000--Sobic001G058900 Sobic005G050500 Sobic005G050500 Sobic002G054000--Sobic005G050500 Sobic001G334300 Sobic001G334300 Sobic002G054000--Sobic001G334300 Sobic002G304900 Sobic002G304900 Sobic002G054000--Sobic002G304900 Sobic004G342400 Sobic004G342400 Sobic002G054000--Sobic004G342400 Sobic009G191200 Sobic009G191200 Sobic002G054000--Sobic009G191200 Sobic010G005300 Sobic010G005300 Sobic002G054000--Sobic010G005300 Sobic002G319200--Sobic002G045100 Sobic001G242800 Sobic001G242800 Sobic002G319200--Sobic001G242800 Sobic002G319200--Sobic001G371100 Sobic005G211200 Sobic005G211200 Sobic002G319200--Sobic005G211200 Sobic002G319200--Sobic010G032700 Sobic002G319200--Sobic001G528600 Sobic004G152200 Sobic004G152200 Sobic002G319200--Sobic004G152200 Sobic009G126500 Sobic009G126500 Sobic002G319200--Sobic009G126500 Sobic002G161700 Sobic002G161700 Sobic002G319200--Sobic002G161700 Sobic007G143000 Sobic007G143000 Sobic002G045100--Sobic007G143000 Sobic002G045100--Sobic005G164700 Sobic009G012700 Sobic009G012700 Sobic002G045100--Sobic009G012700 Sobic002G045100--Sobic002G319200 Sobic003G160900 Sobic003G160900 Sobic002G045100--Sobic003G160900 Sobic007G034400 Sobic007G034400 Sobic002G045100--Sobic007G034400 Sobic004G002350 Sobic004G002350 Sobic002G045100--Sobic004G002350 Sobic010G018000 Sobic010G018000 Sobic002G045100--Sobic010G018000 Sobic002G045100--Sobic001G371100 Sobic008G168100 Sobic008G168100 Sobic001G228200--Sobic008G168100 Sobic009G059500 Sobic009G059500 Sobic001G228200--Sobic009G059500 Sobic002G186900 Sobic002G186900 Sobic001G228200--Sobic002G186900 Sobic001G228200--Sobic001G371100 Sobic003G146800 Sobic003G146800 Sobic001G228200--Sobic003G146800 Sobic001G228200--Sobic001G397000 Sobic007G113300 Sobic007G113300 Sobic001G228200--Sobic007G113300 Sobic001G228200--Sobic002G280700 Sobic004G326600 Sobic004G326600 Sobic001G228200--Sobic004G326600
Octagon: transcription factors


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