Gene annotation
Transcriptome id Sobic.007G079600.1
Synonym Sb07g006390
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
FabA-like domain containing protein, expressed
UniProt C5YIY2
Pfam PF07977
Panther DB PTHR30272 PTHR30272:SF6
NCBI CDD -
KEGG Orthology K02372; 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G22230 : Thioesterase superfamily protein
RAP-DB (Rice) LOC_Os08g12840.1 : FabA-like domain containing protein, expressed
MaizeGDB (Corn) Zm00025a029897
Brachypodium PNT66903
Barley HORVU2Hr1G089160.1 , HORVU2Hr1G089160.2 , HORVU2Hr1G089160.8
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G355500 RPA2A - Putative single-stranded DNA binding complex subunit 2, expressed K10739: RFA2, replication factor A2
2 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
3 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
4 Sobic.007G112100 enoyl-acyl-carrier-protein reductase NADH, chloroplast precursor, expressed K00208: enoyl-[acyl-carrier protein] reductase I
5 Sobic.006G051000 POLA3 - Putative DNA polymerase alpha complex subunit, expressed K02685: DNA primase large subunit
6 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
7 Sobic.001G103000 DNA binding protein, putative, expressed -
8 Sobic.003G183700 MCM4 - Putative minichromosome maintenance MCM complex subunit 4, expressed K02212: MCM4, DNA replication licensing factor MCM4
9 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
10 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
11 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -
12 Sobic.001G081900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@semialdehyde dehydrogenase, NAD binding domain containing protein, putative, expressed K00133: aspartate-semialdehyde dehydrogenase
13 Sobic.003G289800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
14 Sobic.002G383100 expressed protein -
15 Sobic.002G317600 endoribonuclease, putative, expressed -
16 Sobic.001G051300 BEE 1, putative, expressed -
17 Sobic.008G059900 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
18 Sobic.007G134800 2-oxo acid dehydrogenases acyltransferase domain containing protein, expressed K00627: DLAT, aceF, pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase)
19 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
20 Sobic.006G116500 expressed protein -


Gene co-expression network
sample Sobic007G079600 Sobic007G079600 Sobic004G355500 Sobic004G355500 Sobic007G079600--Sobic004G355500 Sobic010G103700 Sobic010G103700 Sobic007G079600--Sobic010G103700 Sobic009G088200 Sobic009G088200 Sobic007G079600--Sobic009G088200 Sobic007G112100 Sobic007G112100 Sobic007G079600--Sobic007G112100 Sobic006G051000 Sobic006G051000 Sobic007G079600--Sobic006G051000 Sobic003G179500 Sobic003G179500 Sobic007G079600--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G079600--Sobic001G103000 Sobic003G183700 Sobic003G183700 Sobic007G079600--Sobic003G183700 Sobic007G139500 Sobic007G139500 Sobic007G079600--Sobic007G139500 Sobic006G116500 Sobic006G116500 Sobic004G355500--Sobic006G116500 Sobic001G456500 Sobic001G456500 Sobic004G355500--Sobic001G456500 Sobic007G152900 Sobic007G152900 Sobic004G355500--Sobic007G152900 Sobic004G355500--Sobic010G103700 Sobic001G169800 Sobic001G169800 Sobic004G355500--Sobic001G169800 Sobic004G197400 Sobic004G197400 Sobic004G355500--Sobic004G197400 Sobic004G355500--Sobic009G088200 Sobic004G355500--Sobic001G103000 Sobic008G129200 Sobic008G129200 Sobic004G355500--Sobic008G129200 Sobic010G103700--Sobic003G183700 Sobic010G103700--Sobic003G179500 Sobic006G120600 Sobic006G120600 Sobic010G103700--Sobic006G120600 Sobic006G195500 Sobic006G195500 Sobic010G103700--Sobic006G195500 Sobic010G103700--Sobic006G051000 Sobic009G087000 Sobic009G087000 Sobic010G103700--Sobic009G087000 Sobic010G147700 Sobic010G147700 Sobic010G103700--Sobic010G147700 Sobic010G103700--Sobic006G116500 Sobic010G103700--Sobic004G355500 Sobic009G088200--Sobic004G355500 Sobic002G280700 Sobic002G280700 Sobic009G088200--Sobic002G280700 Sobic009G088200--Sobic007G152900 Sobic003G396600 Sobic003G396600 Sobic009G088200--Sobic003G396600 Sobic009G088200--Sobic007G079600 Sobic001G078600 Sobic001G078600 Sobic009G088200--Sobic001G078600 Sobic009G088200--Sobic001G103000 Sobic010G032700 Sobic010G032700 Sobic009G088200--Sobic010G032700 Sobic005G047100 Sobic005G047100 Sobic009G088200--Sobic005G047100 Sobic009G109300 Sobic009G109300 Sobic007G112100--Sobic009G109300 Sobic001G532800 Sobic001G532800 Sobic007G112100--Sobic001G532800 Sobic004G032900 Sobic004G032900 Sobic007G112100--Sobic004G032900 Sobic002G158500 Sobic002G158500 Sobic007G112100--Sobic002G158500 Sobic002G236700 Sobic002G236700 Sobic007G112100--Sobic002G236700 Sobic007G112100--Sobic006G120600 Sobic001G140700 Sobic001G140700 Sobic007G112100--Sobic001G140700 Sobic002G304400 Sobic002G304400 Sobic007G112100--Sobic002G304400 Sobic007G112100--Sobic007G079600 Sobic006G051000--Sobic003G183700 Sobic006G051000--Sobic006G195500 Sobic006G051000--Sobic010G103700 Sobic006G196600 Sobic006G196600 Sobic006G051000--Sobic006G196600 Sobic006G051000--Sobic003G179500 Sobic006G051000--Sobic009G087000 Sobic006G051000--Sobic009G109300 Sobic006G051000--Sobic008G129200 Sobic005G110535 Sobic005G110535 Sobic006G051000--Sobic005G110535 Sobic003G179500--Sobic003G183700 Sobic003G179500--Sobic010G103700 Sobic010G105400 Sobic010G105400 Sobic003G179500--Sobic010G105400 Sobic005G144600 Sobic005G144600 Sobic003G179500--Sobic005G144600 Sobic003G179500--Sobic010G147700 Sobic003G179500--Sobic009G087000 Sobic003G179500--Sobic005G110535 Sobic003G179500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic003G179500--Sobic004G047100 Sobic010G274000 Sobic010G274000 Sobic001G103000--Sobic010G274000 Sobic001G103000--Sobic004G355500 Sobic002G191000 Sobic002G191000 Sobic001G103000--Sobic002G191000 Sobic001G103000--Sobic007G139500 Sobic003G135400 Sobic003G135400 Sobic001G103000--Sobic003G135400 Sobic003G410600 Sobic003G410600 Sobic001G103000--Sobic003G410600 Sobic001G103000--Sobic004G197400 Sobic001G103000--Sobic007G152900 Sobic001G103000--Sobic006G116500 Sobic003G183700--Sobic006G051000 Sobic003G183700--Sobic009G087000 Sobic003G183700--Sobic006G195500 Sobic003G183700--Sobic010G103700 Sobic003G183700--Sobic003G179500 Sobic003G183700--Sobic005G110535 Sobic003G183700--Sobic008G129200 Sobic004G321400 Sobic004G321400 Sobic003G183700--Sobic004G321400 Sobic003G183700--Sobic010G147700 Sobic001G196000 Sobic001G196000 Sobic007G139500--Sobic001G196000 Sobic001G051300 Sobic001G051300 Sobic007G139500--Sobic001G051300 Sobic009G206500 Sobic009G206500 Sobic007G139500--Sobic009G206500 Sobic001G437500 Sobic001G437500 Sobic007G139500--Sobic001G437500 Sobic007G139500--Sobic003G179500 Sobic007G139500--Sobic001G103000 Sobic003G017500 Sobic003G017500 Sobic007G139500--Sobic003G017500 Sobic007G139500--Sobic002G191000 Sobic009G214100 Sobic009G214100 Sobic007G139500--Sobic009G214100
Octagon: transcription factors


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