Gene annotation
Transcriptome id Sobic.004G208100.1
Synonym Sb04g025380
Functional annotation expressed protein
UniProt C5XX78
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g39390.2 : expressed protein
MaizeGDB (Corn) Zm00025a031875 , Zm00025a021253
Brachypodium KQK12869
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.004G208100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G021900 rad1, putative, expressed K02830: HRAD1, cell cycle checkpoint protein
2 Sobic.003G444300 expressed protein K11550: SPBC25, kinetochore protein Spc25, animal type
3 Sobic.002G303800 expressed protein -
4 Sobic.001G238900 OsFBX386 - F-box domain containing protein, expressed -
5 Sobic.002G133000 delta14-sterol reductase, putative, expressed K00222: TM7SF2, Delta14-sterol reductase
6 Sobic.001G169800 cyclin, putative, expressed K06627: cyclin-A
7 Sobic.001G122100 protein kinase family protein, putative, expressed K08866: TTK, serine/threonine-protein kinase TTK/MPS1
8 Sobic.001G235700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@translin, putative, expressed -
9 Sobic.002G246900 expressed protein -
10 Sobic.009G109300 POLA4 - Putative DNA polymerase alpha complex subunit, expressed K02684: DNA primase small subunit
11 Sobic.001G521100 POLD2 - Putative DNA polymerase delta complex subunit, expressed K02328: DNA polymerase delta subunit 2
12 Sobic.003G212600 ubiquitin-conjugating enzyme, putative, expressed K13960: UBE2T, ubiquitin-conjugating enzyme E2 T
13 Sobic.006G189200 ubiquitin-conjugating enzyme, putative, expressed K10577: UBE2I, ubiquitin-conjugating enzyme E2 I
14 Sobic.001G369800 monocopper oxidase, putative, expressed -
15 Sobic.003G109200 expressed protein -
16 Sobic.001G412500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein K18732: SARNP, CIP29, SAP domain-containing ribonucleoprotein
17 Sobic.006G094100 expressed protein -
18 Sobic.003G442300 NAD dependent epimerase/dehydratase family protein, putative, expressed K12449: UDP-apiose/xylose synthase
19 Sobic.010G079100 lysM domain-containing GPI-anchored protein 1 precursor, putative, expressed -
20 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -


Gene co-expression network
sample Sobic004G208100 Sobic004G208100 Sobic010G021900 Sobic010G021900 Sobic004G208100--Sobic010G021900 Sobic003G444300 Sobic003G444300 Sobic004G208100--Sobic003G444300 Sobic002G303800 Sobic002G303800 Sobic004G208100--Sobic002G303800 Sobic001G238900 Sobic001G238900 Sobic004G208100--Sobic001G238900 Sobic002G133000 Sobic002G133000 Sobic004G208100--Sobic002G133000 Sobic001G169800 Sobic001G169800 Sobic004G208100--Sobic001G169800 Sobic001G122100 Sobic001G122100 Sobic004G208100--Sobic001G122100 Sobic001G235700 Sobic001G235700 Sobic004G208100--Sobic001G235700 Sobic002G246900 Sobic002G246900 Sobic004G208100--Sobic002G246900 Sobic010G021900--Sobic002G303800 Sobic010G021900--Sobic004G208100 Sobic003G183700 Sobic003G183700 Sobic010G021900--Sobic003G183700 Sobic002G021200 Sobic002G021200 Sobic010G021900--Sobic002G021200 Sobic006G281900 Sobic006G281900 Sobic010G021900--Sobic006G281900 Sobic010G021900--Sobic001G122100 Sobic010G021900--Sobic003G444300 Sobic010G021900--Sobic002G133000 Sobic006G051000 Sobic006G051000 Sobic010G021900--Sobic006G051000 Sobic001G456500 Sobic001G456500 Sobic003G444300--Sobic001G456500 Sobic001G083300 Sobic001G083300 Sobic003G444300--Sobic001G083300 Sobic003G444300--Sobic001G169800 Sobic001G105800 Sobic001G105800 Sobic003G444300--Sobic001G105800 Sobic001G142000 Sobic001G142000 Sobic003G444300--Sobic001G142000 Sobic004G331600 Sobic004G331600 Sobic003G444300--Sobic004G331600 Sobic003G201000 Sobic003G201000 Sobic003G444300--Sobic003G201000 Sobic003G444300--Sobic002G303800 Sobic010G105400 Sobic010G105400 Sobic003G444300--Sobic010G105400 Sobic002G303800--Sobic003G444300 Sobic006G120600 Sobic006G120600 Sobic002G303800--Sobic006G120600 Sobic002G303800--Sobic001G169800 Sobic002G303800--Sobic003G183700 Sobic010G103700 Sobic010G103700 Sobic002G303800--Sobic010G103700 Sobic001G146900 Sobic001G146900 Sobic002G303800--Sobic001G146900 Sobic003G179500 Sobic003G179500 Sobic002G303800--Sobic003G179500 Sobic002G303800--Sobic006G051000 Sobic002G303800--Sobic001G083300 Sobic003G244000 Sobic003G244000 Sobic001G238900--Sobic003G244000 Sobic002G230800 Sobic002G230800 Sobic001G238900--Sobic002G230800 Sobic001G238900--Sobic001G105800 Sobic001G238900--Sobic002G246900 Sobic002G223900 Sobic002G223900 Sobic001G238900--Sobic002G223900 Sobic009G109300 Sobic009G109300 Sobic001G238900--Sobic009G109300 Sobic004G317000 Sobic004G317000 Sobic001G238900--Sobic004G317000 Sobic001G118800 Sobic001G118800 Sobic001G238900--Sobic001G118800 Sobic001G238900--Sobic001G169800 Sobic002G133000--Sobic002G303800 Sobic007G043400 Sobic007G043400 Sobic002G133000--Sobic007G043400 Sobic005G088900 Sobic005G088900 Sobic002G133000--Sobic005G088900 Sobic004G330600 Sobic004G330600 Sobic002G133000--Sobic004G330600 Sobic002G133000--Sobic004G208100 Sobic002G133000--Sobic006G120600 Sobic001G371100 Sobic001G371100 Sobic002G133000--Sobic001G371100 Sobic002G133000--Sobic010G021900 Sobic004G047500 Sobic004G047500 Sobic002G133000--Sobic004G047500 Sobic001G169800--Sobic001G456500 Sobic006G116500 Sobic006G116500 Sobic001G169800--Sobic006G116500 Sobic001G169800--Sobic003G444300 Sobic001G169800--Sobic001G083300 Sobic001G169800--Sobic002G223900 Sobic001G169800--Sobic003G183700 Sobic001G169800--Sobic001G105800 Sobic004G355500 Sobic004G355500 Sobic001G169800--Sobic004G355500 Sobic001G169800--Sobic003G179500 Sobic001G122100--Sobic002G303800 Sobic009G087300 Sobic009G087300 Sobic001G122100--Sobic009G087300 Sobic006G281400 Sobic006G281400 Sobic001G122100--Sobic006G281400 Sobic003G369200 Sobic003G369200 Sobic001G122100--Sobic003G369200 Sobic001G122100--Sobic002G021200 Sobic001G122100--Sobic003G444300 Sobic009G052100 Sobic009G052100 Sobic001G122100--Sobic009G052100 Sobic001G122100--Sobic010G105400 Sobic010G252700 Sobic010G252700 Sobic001G122100--Sobic010G252700 Sobic001G097400 Sobic001G097400 Sobic001G235700--Sobic001G097400 Sobic001G436300 Sobic001G436300 Sobic001G235700--Sobic001G436300 Sobic001G235700--Sobic004G208100 Sobic004G190600 Sobic004G190600 Sobic001G235700--Sobic004G190600 Sobic001G440900 Sobic001G440900 Sobic001G235700--Sobic001G440900 Sobic001G235700--Sobic002G303800 Sobic001G235700--Sobic002G133000 Sobic004G343600 Sobic004G343600 Sobic001G235700--Sobic004G343600 Sobic006G127500 Sobic006G127500 Sobic001G235700--Sobic006G127500 Sobic004G047100 Sobic004G047100 Sobic002G246900--Sobic004G047100 Sobic002G246900--Sobic010G105400 Sobic010G191000 Sobic010G191000 Sobic002G246900--Sobic010G191000 Sobic003G107200 Sobic003G107200 Sobic002G246900--Sobic003G107200 Sobic002G246900--Sobic001G238900 Sobic009G181500 Sobic009G181500 Sobic002G246900--Sobic009G181500 Sobic002G236700 Sobic002G236700 Sobic002G246900--Sobic002G236700 Sobic002G246900--Sobic001G169800 Sobic002G246900--Sobic002G230800
Octagon: transcription factors


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