Gene annotation
Transcriptome id Sobic.003G257200.1
Synonym Sb03g031200
Functional annotation expressed protein
UniProt C5XGQ5
Pfam PF04504
Panther DB PTHR31662 PTHR31662:SF13
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G00390 : DNA-binding storekeeper protein-related transcriptional regulator
RAP-DB (Rice) LOC_Os02g53150.1 : expressed protein
MaizeGDB (Corn) Zm00025a022258
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G257200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G098200 expressed protein -
2 Sobic.009G088600 expressed protein -
3 Sobic.001G097400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphatidylinositol kinase, putative, expressed -
4 Sobic.006G127500 DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative, expressed K03013: RPB5, DNA-directed RNA polymerases I, II, and III subunit RPABC1
5 Sobic.002G267600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pentatricopeptide, putative, expressed -
6 Sobic.004G343600 3-5 exoribonuclease CSL4, putative, expressed K07573: CSL4, exosome complex component CSL4
7 Sobic.010G092801 - -
8 Sobic.002G183300 GTP binding protein, putative, expressed -
9 Sobic.009G253400 hyaluronan/mRNA binding family domain containing protein, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein
10 Sobic.001G081700 SWIB/MDM2 domain containing protein, expressed -
11 Sobic.001G235700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@translin, putative, expressed -
12 Sobic.005G178700 OsFBX135 - F-box domain containing protein, expressed -
13 Sobic.001G105600 OsFBDUF60 - F-box and DUF domain containing protein, expressed -
14 Sobic.009G205400 RING-H2 finger protein ATL2M, putative, expressed -
15 Sobic.010G277200 zinc knuckle domain containing protein, expressed K10904: TIMELESS-interacting protein
16 Sobic.005G011000 Rf1, mitochondrial precursor, putative, expressed -
17 Sobic.007G069700 gar2, putative, expressed K11294: NCL, nucleolin
18 Sobic.001G436300 nucleotide-sensitive chloride conductance regulator containing protein, expressed K05019: chloride channel, nucleotide-sensitive, 1A
19 Sobic.002G389500 h/ACA ribonucleoprotein complex subunit 4, putative, expressed K11131: DKC1, NOLA4, H/ACA ribonucleoprotein complex subunit 4
20 Sobic.004G227100 survival motor neuron containing protein, expressed K13130: GEMIN2, gem associated protein 2


Gene co-expression network
sample Sobic003G257200 Sobic003G257200 Sobic003G098200 Sobic003G098200 Sobic003G257200--Sobic003G098200 Sobic009G088600 Sobic009G088600 Sobic003G257200--Sobic009G088600 Sobic001G097400 Sobic001G097400 Sobic003G257200--Sobic001G097400 Sobic006G127500 Sobic006G127500 Sobic003G257200--Sobic006G127500 Sobic002G267600 Sobic002G267600 Sobic003G257200--Sobic002G267600 Sobic004G343600 Sobic004G343600 Sobic003G257200--Sobic004G343600 Sobic010G092801 Sobic010G092801 Sobic003G257200--Sobic010G092801 Sobic002G183300 Sobic002G183300 Sobic003G257200--Sobic002G183300 Sobic009G253400 Sobic009G253400 Sobic003G257200--Sobic009G253400 Sobic003G098200--Sobic006G127500 Sobic003G098200--Sobic001G097400 Sobic003G098200--Sobic003G257200 Sobic003G436600 Sobic003G436600 Sobic003G098200--Sobic003G436600 Sobic001G436300 Sobic001G436300 Sobic003G098200--Sobic001G436300 Sobic009G233700 Sobic009G233700 Sobic003G098200--Sobic009G233700 Sobic001G235700 Sobic001G235700 Sobic003G098200--Sobic001G235700 Sobic003G425100 Sobic003G425100 Sobic003G098200--Sobic003G425100 Sobic004G227100 Sobic004G227100 Sobic003G098200--Sobic004G227100 Sobic009G088600--Sobic003G257200 Sobic004G272900 Sobic004G272900 Sobic009G088600--Sobic004G272900 Sobic003G412100 Sobic003G412100 Sobic009G088600--Sobic003G412100 Sobic009G088600--Sobic009G253400 Sobic010G235500 Sobic010G235500 Sobic009G088600--Sobic010G235500 Sobic003G107900 Sobic003G107900 Sobic009G088600--Sobic003G107900 Sobic007G219200 Sobic007G219200 Sobic009G088600--Sobic007G219200 Sobic010G277200 Sobic010G277200 Sobic009G088600--Sobic010G277200 Sobic006G250100 Sobic006G250100 Sobic009G088600--Sobic006G250100 Sobic001G097400--Sobic001G235700 Sobic001G097400--Sobic001G436300 Sobic005G088900 Sobic005G088900 Sobic001G097400--Sobic005G088900 Sobic001G097400--Sobic006G127500 Sobic002G110500 Sobic002G110500 Sobic001G097400--Sobic002G110500 Sobic001G097400--Sobic003G098200 Sobic003G432300 Sobic003G432300 Sobic001G097400--Sobic003G432300 Sobic001G149100 Sobic001G149100 Sobic001G097400--Sobic001G149100 Sobic006G251600 Sobic006G251600 Sobic001G097400--Sobic006G251600 Sobic006G127500--Sobic001G436300 Sobic001G157600 Sobic001G157600 Sobic006G127500--Sobic001G157600 Sobic006G127500--Sobic006G251600 Sobic003G028400 Sobic003G028400 Sobic006G127500--Sobic003G028400 Sobic006G127500--Sobic003G098200 Sobic006G127500--Sobic004G343600 Sobic006G127500--Sobic001G097400 Sobic006G127500--Sobic001G235700 Sobic001G107300 Sobic001G107300 Sobic006G127500--Sobic001G107300 Sobic008G163400 Sobic008G163400 Sobic002G267600--Sobic008G163400 Sobic003G239000 Sobic003G239000 Sobic002G267600--Sobic003G239000 Sobic002G267600--Sobic001G149100 Sobic007G031300 Sobic007G031300 Sobic002G267600--Sobic007G031300 Sobic003G299200 Sobic003G299200 Sobic002G267600--Sobic003G299200 Sobic008G179000 Sobic008G179000 Sobic002G267600--Sobic008G179000 Sobic004G208100 Sobic004G208100 Sobic002G267600--Sobic004G208100 Sobic001G408300 Sobic001G408300 Sobic002G267600--Sobic001G408300 Sobic004G047500 Sobic004G047500 Sobic002G267600--Sobic004G047500 Sobic004G343600--Sobic001G107300 Sobic002G386300 Sobic002G386300 Sobic004G343600--Sobic002G386300 Sobic006G013900 Sobic006G013900 Sobic004G343600--Sobic006G013900 Sobic010G032700 Sobic010G032700 Sobic004G343600--Sobic010G032700 Sobic004G036800 Sobic004G036800 Sobic004G343600--Sobic004G036800 Sobic004G343600--Sobic001G436300 Sobic004G343600--Sobic006G127500 Sobic001G412500 Sobic001G412500 Sobic004G343600--Sobic001G412500 Sobic002G184900 Sobic002G184900 Sobic004G343600--Sobic002G184900 Sobic010G092801--Sobic002G183300 Sobic002G240900 Sobic002G240900 Sobic010G092801--Sobic002G240900 Sobic010G092801--Sobic004G227100 Sobic005G011000 Sobic005G011000 Sobic010G092801--Sobic005G011000 Sobic006G271900 Sobic006G271900 Sobic010G092801--Sobic006G271900 Sobic009G116400 Sobic009G116400 Sobic010G092801--Sobic009G116400 Sobic010G092801--Sobic003G299200 Sobic001G347100 Sobic001G347100 Sobic010G092801--Sobic001G347100 Sobic001G081300 Sobic001G081300 Sobic010G092801--Sobic001G081300 Sobic004G025100 Sobic004G025100 Sobic002G183300--Sobic004G025100 Sobic001G401400 Sobic001G401400 Sobic002G183300--Sobic001G401400 Sobic005G059400 Sobic005G059400 Sobic002G183300--Sobic005G059400 Sobic001G105600 Sobic001G105600 Sobic002G183300--Sobic001G105600 Sobic002G183300--Sobic009G253400 Sobic001G334100 Sobic001G334100 Sobic002G183300--Sobic001G334100 Sobic001G122200 Sobic001G122200 Sobic002G183300--Sobic001G122200 Sobic001G204700 Sobic001G204700 Sobic002G183300--Sobic001G204700 Sobic008G000600 Sobic008G000600 Sobic002G183300--Sobic008G000600 Sobic002G218700 Sobic002G218700 Sobic009G253400--Sobic002G218700 Sobic010G170900 Sobic010G170900 Sobic009G253400--Sobic010G170900 Sobic001G261585 Sobic001G261585 Sobic009G253400--Sobic001G261585 Sobic008G007000 Sobic008G007000 Sobic009G253400--Sobic008G007000 Sobic009G253400--Sobic002G183300 Sobic009G055400 Sobic009G055400 Sobic009G253400--Sobic009G055400 Sobic003G347300 Sobic003G347300 Sobic009G253400--Sobic003G347300 Sobic001G372900 Sobic001G372900 Sobic009G253400--Sobic001G372900 Sobic002G132600 Sobic002G132600 Sobic009G253400--Sobic002G132600
Octagon: transcription factors


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