Gene annotation
Transcriptome id Sobic.009G253400.1
Synonym Sb09g030400
Functional annotation hyaluronan/mRNA binding family domain containing protein, expressed
UniProt C5YWY3
Pfam PF09598 PF04774
Panther DB PTHR12299 PTHR12299:SF26
NCBI CDD KOG2945; Predicted RNA-binding protein
KEGG Orthology K13199; plasminogen activator inhibitor 1 RNA-binding protein
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G17520 : Hyaluronan / mRNA binding family
RAP-DB (Rice) LOC_Os05g51180.1 : hyaluronan/mRNA binding family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a043560 , Zm00025a036768
Brachypodium KQK04600
Barley -
Wheat TraesCS3B02G321000 , TraesCS3B02G321000
Populus -


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cDNA sequences
Sobic.009G253400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G218700 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44
2 Sobic.010G170900 expressed protein -
3 Sobic.001G261585 - -
4 Sobic.008G007000 HIT zinc finger domain containing protein, expressed K11663: ZNHIT1, zinc finger HIT domain-containing protein 1
5 Sobic.002G183300 GTP binding protein, putative, expressed -
6 Sobic.009G055400 expressed protein -
7 Sobic.003G347300 TBC domain containing protein, expressed -
8 Sobic.001G372900 expressed protein K08819: cyclin-dependent kinase 12/13
9 Sobic.002G132600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K14314: NUP210, nuclear pore complex protein Nup210
10 Sobic.009G040500 glioma tumor suppressor candidate region gene 2 protein, putative, expressed K14840: NOP53, nucleolar protein 53
11 Sobic.009G031500 agenet domain containing protein, putative, expressed -
12 Sobic.007G069700 gar2, putative, expressed K11294: NCL, nucleolin
13 Sobic.001G097400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphatidylinositol kinase, putative, expressed -
14 Sobic.001G358800 protein phosphatase 2C, putative, expressed -
15 Sobic.005G059400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized PPR-repeat protein, putative, expressed -
16 Sobic.004G036700 arginine N-methyltransferase 5, putative, expressed K02516: PRMT5, type II protein arginine methyltransferase
17 Sobic.003G432300 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein K14794: ribosomal RNA-processing protein 12
18 Sobic.007G219200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transmembrane 9 superfamily member, putative, expressed K17086: transmembrane 9 superfamily member 2/4
19 Sobic.002G110500 expressed protein K14308: NUP54, nuclear pore complex protein Nup54
20 Sobic.005G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@vegetative storage protein, putative, expressed -


Gene co-expression network
sample Sobic009G253400 Sobic009G253400 Sobic002G218700 Sobic002G218700 Sobic009G253400--Sobic002G218700 Sobic010G170900 Sobic010G170900 Sobic009G253400--Sobic010G170900 Sobic001G261585 Sobic001G261585 Sobic009G253400--Sobic001G261585 Sobic008G007000 Sobic008G007000 Sobic009G253400--Sobic008G007000 Sobic002G183300 Sobic002G183300 Sobic009G253400--Sobic002G183300 Sobic009G055400 Sobic009G055400 Sobic009G253400--Sobic009G055400 Sobic003G347300 Sobic003G347300 Sobic009G253400--Sobic003G347300 Sobic001G372900 Sobic001G372900 Sobic009G253400--Sobic001G372900 Sobic002G132600 Sobic002G132600 Sobic009G253400--Sobic002G132600 Sobic002G218700--Sobic003G347300 Sobic010G046400 Sobic010G046400 Sobic002G218700--Sobic010G046400 Sobic001G247200 Sobic001G247200 Sobic002G218700--Sobic001G247200 Sobic009G030300 Sobic009G030300 Sobic002G218700--Sobic009G030300 Sobic010G256000 Sobic010G256000 Sobic002G218700--Sobic010G256000 Sobic003G131200 Sobic003G131200 Sobic002G218700--Sobic003G131200 Sobic004G227500 Sobic004G227500 Sobic002G218700--Sobic004G227500 Sobic002G218700--Sobic009G253400 Sobic004G225700 Sobic004G225700 Sobic002G218700--Sobic004G225700 Sobic010G170900--Sobic009G253400 Sobic001G136500 Sobic001G136500 Sobic010G170900--Sobic001G136500 Sobic003G014900 Sobic003G014900 Sobic010G170900--Sobic003G014900 Sobic005G007700 Sobic005G007700 Sobic010G170900--Sobic005G007700 Sobic004G129600 Sobic004G129600 Sobic010G170900--Sobic004G129600 Sobic009G056300 Sobic009G056300 Sobic010G170900--Sobic009G056300 Sobic010G197800 Sobic010G197800 Sobic010G170900--Sobic010G197800 Sobic005G229000 Sobic005G229000 Sobic010G170900--Sobic005G229000 Sobic009G031500 Sobic009G031500 Sobic010G170900--Sobic009G031500 Sobic001G088900 Sobic001G088900 Sobic001G261585--Sobic001G088900 Sobic001G261585--Sobic009G253400 Sobic003G420000 Sobic003G420000 Sobic001G261585--Sobic003G420000 Sobic001G367100 Sobic001G367100 Sobic001G261585--Sobic001G367100 Sobic009G235200 Sobic009G235200 Sobic001G261585--Sobic009G235200 Sobic006G059500 Sobic006G059500 Sobic001G261585--Sobic006G059500 Sobic005G168300 Sobic005G168300 Sobic001G261585--Sobic005G168300 Sobic007G030000 Sobic007G030000 Sobic001G261585--Sobic007G030000 Sobic001G187800 Sobic001G187800 Sobic001G261585--Sobic001G187800 Sobic001G487200 Sobic001G487200 Sobic008G007000--Sobic001G487200 Sobic008G007000--Sobic009G031500 Sobic002G370400 Sobic002G370400 Sobic008G007000--Sobic002G370400 Sobic004G315700 Sobic004G315700 Sobic008G007000--Sobic004G315700 Sobic008G007000--Sobic009G253400 Sobic009G167100 Sobic009G167100 Sobic008G007000--Sobic009G167100 Sobic001G051300 Sobic001G051300 Sobic008G007000--Sobic001G051300 Sobic006G084300 Sobic006G084300 Sobic008G007000--Sobic006G084300 Sobic007G219200 Sobic007G219200 Sobic008G007000--Sobic007G219200 Sobic004G025100 Sobic004G025100 Sobic002G183300--Sobic004G025100 Sobic001G401400 Sobic001G401400 Sobic002G183300--Sobic001G401400 Sobic005G059400 Sobic005G059400 Sobic002G183300--Sobic005G059400 Sobic001G105600 Sobic001G105600 Sobic002G183300--Sobic001G105600 Sobic002G183300--Sobic009G253400 Sobic001G334100 Sobic001G334100 Sobic002G183300--Sobic001G334100 Sobic001G122200 Sobic001G122200 Sobic002G183300--Sobic001G122200 Sobic001G204700 Sobic001G204700 Sobic002G183300--Sobic001G204700 Sobic008G000600 Sobic008G000600 Sobic002G183300--Sobic008G000600 Sobic001G366800 Sobic001G366800 Sobic009G055400--Sobic001G366800 Sobic006G056000 Sobic006G056000 Sobic009G055400--Sobic006G056000 Sobic009G096100 Sobic009G096100 Sobic009G055400--Sobic009G096100 Sobic004G232000 Sobic004G232000 Sobic009G055400--Sobic004G232000 Sobic009G055400--Sobic003G131200 Sobic009G126000 Sobic009G126000 Sobic009G055400--Sobic009G126000 Sobic009G213100 Sobic009G213100 Sobic009G055400--Sobic009G213100 Sobic002G192500 Sobic002G192500 Sobic009G055400--Sobic002G192500 Sobic009G055400--Sobic009G253400 Sobic003G347300--Sobic002G218700 Sobic001G021500 Sobic001G021500 Sobic003G347300--Sobic001G021500 Sobic002G033700 Sobic002G033700 Sobic003G347300--Sobic002G033700 Sobic003G347300--Sobic009G126000 Sobic006G254500 Sobic006G254500 Sobic003G347300--Sobic006G254500 Sobic003G347300--Sobic009G030300 Sobic009G013700 Sobic009G013700 Sobic003G347300--Sobic009G013700 Sobic009G123500 Sobic009G123500 Sobic003G347300--Sobic009G123500 Sobic008G086200 Sobic008G086200 Sobic003G347300--Sobic008G086200 Sobic001G499200 Sobic001G499200 Sobic001G372900--Sobic001G499200 Sobic001G296100 Sobic001G296100 Sobic001G372900--Sobic001G296100 Sobic003G077500 Sobic003G077500 Sobic001G372900--Sobic003G077500 Sobic006G081500 Sobic006G081500 Sobic001G372900--Sobic006G081500 Sobic001G157100 Sobic001G157100 Sobic001G372900--Sobic001G157100 Sobic001G372900--Sobic006G084300 Sobic001G540700 Sobic001G540700 Sobic001G372900--Sobic001G540700 Sobic008G172200 Sobic008G172200 Sobic001G372900--Sobic008G172200 Sobic002G334600 Sobic002G334600 Sobic001G372900--Sobic002G334600 Sobic009G104900 Sobic009G104900 Sobic002G132600--Sobic009G104900 Sobic003G432300 Sobic003G432300 Sobic002G132600--Sobic003G432300 Sobic005G028100 Sobic005G028100 Sobic002G132600--Sobic005G028100 Sobic001G373000 Sobic001G373000 Sobic002G132600--Sobic001G373000 Sobic002G126800 Sobic002G126800 Sobic002G132600--Sobic002G126800 Sobic004G038100 Sobic004G038100 Sobic002G132600--Sobic004G038100 Sobic002G132600--Sobic006G059500 Sobic002G254800 Sobic002G254800 Sobic002G132600--Sobic002G254800 Sobic010G250800 Sobic010G250800 Sobic002G132600--Sobic010G250800
Octagon: transcription factors


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