Gene annotation
Transcriptome id Sobic.001G358800.1
Synonym POL, Sb01g034260
Functional annotation protein phosphatase 2C, putative, expressed
UniProt A0A1Z5S9Y2
Pfam PF00481
Panther DB PTHR13832 PTHR13832:SF301
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity GO:0006470protein dephosphorylation GO:0004722protein serine/threonine phosphatase activity


Orthologs (automatic annotation)
TAIR AT2G46920 : Protein phosphatase 2C family protein
RAP-DB (Rice) LOC_Os03g25600.1 : protein phosphatase 2C, putative, expressed
MaizeGDB (Corn) Zm00025a002644 , Zm00025a052298
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G358800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
2 Sobic.002G132600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- K14314: NUP210, nuclear pore complex protein Nup210
3 Sobic.002G130900 zinc finger family protein, putative, expressed K18932: palmitoyltransferase
4 Sobic.007G125700 NHL repeat-containing protein, putative, expressed -
5 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
6 Sobic.001G372900 expressed protein K08819: cyclin-dependent kinase 12/13
7 Sobic.006G084300 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
8 Sobic.001G122100 protein kinase family protein, putative, expressed K08866: TTK, serine/threonine-protein kinase TTK/MPS1
9 Sobic.003G077500 expressed protein -
10 Sobic.008G090000 oxysterol-binding protein, putative, expressed -
11 Sobic.001G540700 expressed protein -
12 Sobic.001G296800 WD repeat-containing protein 8, putative, expressed -
13 Sobic.001G385400 guanine nucleotide exchange factor, putative, expressed -
14 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
15 Sobic.006G218900 TKL_IRAK_CrRLK1L-1.9 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
16 Sobic.001G290500 protein kinase family protein, putative, expressed K14500: BR-signaling kinase
17 Sobic.003G194600 ZOS1-10 - C2H2 zinc finger protein, expressed -
18 Sobic.009G052100 tubulin/FtsZ domain containing protein, putative, expressed K10389: tubulin gamma
19 Sobic.005G021900 expressed protein -
20 Sobic.009G253400 hyaluronan/mRNA binding family domain containing protein, expressed K13199: plasminogen activator inhibitor 1 RNA-binding protein


Gene co-expression network
sample Sobic001G358800 Sobic001G358800 Sobic004G315700 Sobic004G315700 Sobic001G358800--Sobic004G315700 Sobic002G132600 Sobic002G132600 Sobic001G358800--Sobic002G132600 Sobic002G130900 Sobic002G130900 Sobic001G358800--Sobic002G130900 Sobic007G125700 Sobic007G125700 Sobic001G358800--Sobic007G125700 Sobic006G254500 Sobic006G254500 Sobic001G358800--Sobic006G254500 Sobic001G372900 Sobic001G372900 Sobic001G358800--Sobic001G372900 Sobic006G084300 Sobic006G084300 Sobic001G358800--Sobic006G084300 Sobic001G122100 Sobic001G122100 Sobic001G358800--Sobic001G122100 Sobic003G077500 Sobic003G077500 Sobic001G358800--Sobic003G077500 Sobic001G487200 Sobic001G487200 Sobic004G315700--Sobic001G487200 Sobic009G212100 Sobic009G212100 Sobic004G315700--Sobic009G212100 Sobic001G296800 Sobic001G296800 Sobic004G315700--Sobic001G296800 Sobic009G052100 Sobic009G052100 Sobic004G315700--Sobic009G052100 Sobic004G315700--Sobic006G084300 Sobic003G420300 Sobic003G420300 Sobic004G315700--Sobic003G420300 Sobic006G218900 Sobic006G218900 Sobic004G315700--Sobic006G218900 Sobic003G345000 Sobic003G345000 Sobic004G315700--Sobic003G345000 Sobic001G540700 Sobic001G540700 Sobic004G315700--Sobic001G540700 Sobic009G104900 Sobic009G104900 Sobic002G132600--Sobic009G104900 Sobic003G432300 Sobic003G432300 Sobic002G132600--Sobic003G432300 Sobic005G028100 Sobic005G028100 Sobic002G132600--Sobic005G028100 Sobic001G373000 Sobic001G373000 Sobic002G132600--Sobic001G373000 Sobic002G126800 Sobic002G126800 Sobic002G132600--Sobic002G126800 Sobic004G038100 Sobic004G038100 Sobic002G132600--Sobic004G038100 Sobic006G059500 Sobic006G059500 Sobic002G132600--Sobic006G059500 Sobic002G254800 Sobic002G254800 Sobic002G132600--Sobic002G254800 Sobic010G250800 Sobic010G250800 Sobic002G132600--Sobic010G250800 Sobic002G130900--Sobic007G125700 Sobic002G130900--Sobic003G077500 Sobic001G367100 Sobic001G367100 Sobic002G130900--Sobic001G367100 Sobic002G130900--Sobic001G372900 Sobic002G130900--Sobic001G358800 Sobic002G130900--Sobic006G254500 Sobic001G315400 Sobic001G315400 Sobic002G130900--Sobic001G315400 Sobic001G385400 Sobic001G385400 Sobic002G130900--Sobic001G385400 Sobic002G130900--Sobic001G540700 Sobic002G430900 Sobic002G430900 Sobic007G125700--Sobic002G430900 Sobic004G207000 Sobic004G207000 Sobic007G125700--Sobic004G207000 Sobic010G149600 Sobic010G149600 Sobic007G125700--Sobic010G149600 Sobic010G269300 Sobic010G269300 Sobic007G125700--Sobic010G269300 Sobic002G219900 Sobic002G219900 Sobic007G125700--Sobic002G219900 Sobic007G125700--Sobic003G077500 Sobic001G395200 Sobic001G395200 Sobic007G125700--Sobic001G395200 Sobic004G043750 Sobic004G043750 Sobic007G125700--Sobic004G043750 Sobic006G280100 Sobic006G280100 Sobic007G125700--Sobic006G280100 Sobic006G267500 Sobic006G267500 Sobic006G254500--Sobic006G267500 Sobic006G254500--Sobic009G212100 Sobic006G254500--Sobic004G315700 Sobic002G393200 Sobic002G393200 Sobic006G254500--Sobic002G393200 Sobic007G166800 Sobic007G166800 Sobic006G254500--Sobic007G166800 Sobic001G285200 Sobic001G285200 Sobic006G254500--Sobic001G285200 Sobic006G254500--Sobic003G077500 Sobic006G254500--Sobic001G487200 Sobic009G206500 Sobic009G206500 Sobic006G254500--Sobic009G206500 Sobic001G499200 Sobic001G499200 Sobic001G372900--Sobic001G499200 Sobic001G296100 Sobic001G296100 Sobic001G372900--Sobic001G296100 Sobic001G372900--Sobic003G077500 Sobic006G081500 Sobic006G081500 Sobic001G372900--Sobic006G081500 Sobic001G157100 Sobic001G157100 Sobic001G372900--Sobic001G157100 Sobic001G372900--Sobic006G084300 Sobic001G372900--Sobic001G540700 Sobic008G172200 Sobic008G172200 Sobic001G372900--Sobic008G172200 Sobic002G334600 Sobic002G334600 Sobic001G372900--Sobic002G334600 Sobic006G084300--Sobic004G315700 Sobic001G199500 Sobic001G199500 Sobic006G084300--Sobic001G199500 Sobic008G090000 Sobic008G090000 Sobic006G084300--Sobic008G090000 Sobic006G084300--Sobic009G212100 Sobic006G071628 Sobic006G071628 Sobic006G084300--Sobic006G071628 Sobic001G425700 Sobic001G425700 Sobic006G084300--Sobic001G425700 Sobic003G104100 Sobic003G104100 Sobic006G084300--Sobic003G104100 Sobic006G281900 Sobic006G281900 Sobic006G084300--Sobic006G281900 Sobic003G024000 Sobic003G024000 Sobic006G084300--Sobic003G024000 Sobic002G303800 Sobic002G303800 Sobic001G122100--Sobic002G303800 Sobic009G087300 Sobic009G087300 Sobic001G122100--Sobic009G087300 Sobic006G281400 Sobic006G281400 Sobic001G122100--Sobic006G281400 Sobic003G369200 Sobic003G369200 Sobic001G122100--Sobic003G369200 Sobic002G021200 Sobic002G021200 Sobic001G122100--Sobic002G021200 Sobic003G444300 Sobic003G444300 Sobic001G122100--Sobic003G444300 Sobic001G122100--Sobic009G052100 Sobic010G105400 Sobic010G105400 Sobic001G122100--Sobic010G105400 Sobic010G252700 Sobic010G252700 Sobic001G122100--Sobic010G252700 Sobic003G077500--Sobic001G315400 Sobic003G077500--Sobic007G125700 Sobic003G077500--Sobic001G372900 Sobic003G077500--Sobic002G334600 Sobic003G077500--Sobic002G219900 Sobic003G077500--Sobic006G254500 Sobic003G077500--Sobic001G367100 Sobic003G077500--Sobic004G315700 Sobic009G031500 Sobic009G031500 Sobic003G077500--Sobic009G031500
Octagon: transcription factors


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