Gene annotation
Transcriptome id Sobic.006G254500.1
Synonym Sb06g031840, iqd32
Functional annotation IQ calmodulin-binding motif family protein, putative, expressed
UniProt C5Y9Y3
Pfam PF00612
Panther DB PTHR32295 PTHR32295:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G19870 : IQ-domain 32
RAP-DB (Rice) LOC_Os04g56740.1 : IQ calmodulin-binding motif family protein, putative, expressed
MaizeGDB (Corn) Zm00025a057303 , Zm00025a009421
Brachypodium KQJ85137
Barley HORVU2Hr1G109850.9 , HORVU2Hr1G109850.8 , HORVU2Hr1G109850.3 , HORVU2Hr1G109850.2 , HORVU2Hr1G109850.1 , HORVU2Hr1G109850.7 , HORVU2Hr1G109850.5 , HORVU2Hr1G109850.4 , HORVU2Hr1G109850.10 , HORVU2Hr1G109850.6
Wheat TraesCS2A02G492300 , TraesCS2D02G492600 , TraesCS2D02G492600 , TraesCS2D02G492600 , TraesCS2D02G492600 , TraesCS2B02G520500 , TraesCS2B02G520500 , TraesCS2B02G520500 , TraesCS2B02G520500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
2 Sobic.009G212100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
3 Sobic.004G315700 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
4 Sobic.002G393200 CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
5 Sobic.007G166800 domain of unknown function DUF966 domain containing protein, expressed -
6 Sobic.001G285200 protein transport protein-related, putative, expressed -
7 Sobic.003G077500 expressed protein -
8 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
9 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
10 Sobic.010G090500 expressed protein -
11 Sobic.005G021900 expressed protein -
12 Sobic.009G005700 FYVE zinc finger domain containing protein, expressed -
13 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
14 Sobic.009G061000 DNA binding protein, putative, expressed -
15 Sobic.001G372900 expressed protein K08819: cyclin-dependent kinase 12/13
16 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
17 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
18 Sobic.008G148500 expressed protein -
19 Sobic.001G507200 PIR, putative, expressed K05749: cytoplasmic FMR1 interacting protein
20 Sobic.008G192700 ATMAP70 protein, putative, expressed -


Gene co-expression network
sample Sobic006G254500 Sobic006G254500 Sobic006G267500 Sobic006G267500 Sobic006G254500--Sobic006G267500 Sobic009G212100 Sobic009G212100 Sobic006G254500--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic006G254500--Sobic004G315700 Sobic002G393200 Sobic002G393200 Sobic006G254500--Sobic002G393200 Sobic007G166800 Sobic007G166800 Sobic006G254500--Sobic007G166800 Sobic001G285200 Sobic001G285200 Sobic006G254500--Sobic001G285200 Sobic003G077500 Sobic003G077500 Sobic006G254500--Sobic003G077500 Sobic001G487200 Sobic001G487200 Sobic006G254500--Sobic001G487200 Sobic009G206500 Sobic009G206500 Sobic006G254500--Sobic009G206500 Sobic009G061000 Sobic009G061000 Sobic006G267500--Sobic009G061000 Sobic006G267500--Sobic009G206500 Sobic006G267500--Sobic009G212100 Sobic006G267500--Sobic006G254500 Sobic001G437500 Sobic001G437500 Sobic006G267500--Sobic001G437500 Sobic006G267500--Sobic004G315700 Sobic010G090500 Sobic010G090500 Sobic006G267500--Sobic010G090500 Sobic005G204700 Sobic005G204700 Sobic006G267500--Sobic005G204700 Sobic001G296800 Sobic001G296800 Sobic006G267500--Sobic001G296800 Sobic009G212100--Sobic001G487200 Sobic009G212100--Sobic004G315700 Sobic009G212100--Sobic001G296800 Sobic003G226700 Sobic003G226700 Sobic009G212100--Sobic003G226700 Sobic007G084200 Sobic007G084200 Sobic009G212100--Sobic007G084200 Sobic009G212100--Sobic006G267500 Sobic006G084300 Sobic006G084300 Sobic009G212100--Sobic006G084300 Sobic001G369800 Sobic001G369800 Sobic009G212100--Sobic001G369800 Sobic009G212100--Sobic006G254500 Sobic004G315700--Sobic001G487200 Sobic004G315700--Sobic009G212100 Sobic004G315700--Sobic001G296800 Sobic009G052100 Sobic009G052100 Sobic004G315700--Sobic009G052100 Sobic004G315700--Sobic006G084300 Sobic003G420300 Sobic003G420300 Sobic004G315700--Sobic003G420300 Sobic006G218900 Sobic006G218900 Sobic004G315700--Sobic006G218900 Sobic003G345000 Sobic003G345000 Sobic004G315700--Sobic003G345000 Sobic001G540700 Sobic001G540700 Sobic004G315700--Sobic001G540700 Sobic008G148500 Sobic008G148500 Sobic002G393200--Sobic008G148500 Sobic002G393200--Sobic006G254500 Sobic002G393200--Sobic005G204700 Sobic004G152200 Sobic004G152200 Sobic002G393200--Sobic004G152200 Sobic002G161700 Sobic002G161700 Sobic002G393200--Sobic002G161700 Sobic003G131200 Sobic003G131200 Sobic002G393200--Sobic003G131200 Sobic002G393200--Sobic009G206500 Sobic002G143200 Sobic002G143200 Sobic002G393200--Sobic002G143200 Sobic002G393200--Sobic006G267500 Sobic007G166800--Sobic001G487200 Sobic010G129700 Sobic010G129700 Sobic007G166800--Sobic010G129700 Sobic007G166800--Sobic006G254500 Sobic007G166800--Sobic001G285200 Sobic007G166800--Sobic006G218900 Sobic005G021900 Sobic005G021900 Sobic007G166800--Sobic005G021900 Sobic001G231200 Sobic001G231200 Sobic007G166800--Sobic001G231200 Sobic007G166800--Sobic004G315700 Sobic007G166800--Sobic001G540700 Sobic002G419200 Sobic002G419200 Sobic001G285200--Sobic002G419200 Sobic001G201000 Sobic001G201000 Sobic001G285200--Sobic001G201000 Sobic006G272500 Sobic006G272500 Sobic001G285200--Sobic006G272500 Sobic005G055600 Sobic005G055600 Sobic001G285200--Sobic005G055600 Sobic003G277200 Sobic003G277200 Sobic001G285200--Sobic003G277200 Sobic008G192700 Sobic008G192700 Sobic001G285200--Sobic008G192700 Sobic003G338200 Sobic003G338200 Sobic001G285200--Sobic003G338200 Sobic010G211800 Sobic010G211800 Sobic001G285200--Sobic010G211800 Sobic009G175100 Sobic009G175100 Sobic001G285200--Sobic009G175100 Sobic001G315400 Sobic001G315400 Sobic003G077500--Sobic001G315400 Sobic007G125700 Sobic007G125700 Sobic003G077500--Sobic007G125700 Sobic001G372900 Sobic001G372900 Sobic003G077500--Sobic001G372900 Sobic002G334600 Sobic002G334600 Sobic003G077500--Sobic002G334600 Sobic002G219900 Sobic002G219900 Sobic003G077500--Sobic002G219900 Sobic003G077500--Sobic006G254500 Sobic001G367100 Sobic001G367100 Sobic003G077500--Sobic001G367100 Sobic003G077500--Sobic004G315700 Sobic009G031500 Sobic009G031500 Sobic003G077500--Sobic009G031500 Sobic001G487200--Sobic004G315700 Sobic001G487200--Sobic009G212100 Sobic001G487200--Sobic001G369800 Sobic001G487200--Sobic001G231200 Sobic002G370400 Sobic002G370400 Sobic001G487200--Sobic002G370400 Sobic001G487200--Sobic003G226700 Sobic001G487200--Sobic001G540700 Sobic001G487200--Sobic001G296800 Sobic001G487200--Sobic007G084200 Sobic007G139500 Sobic007G139500 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic009G206500--Sobic006G267500 Sobic009G206500--Sobic001G437500 Sobic001G144200 Sobic001G144200 Sobic009G206500--Sobic001G144200 Sobic007G040301 Sobic007G040301 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G026101 Sobic009G026101 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600
Octagon: transcription factors


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