Gene annotation
Transcriptome id Sobic.002G393200.1
Synonym ATCBK3, CRK1, ATCRK1, Sb02g040850
Functional annotation CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5X3D9
Pfam PF00069
Panther DB PTHR24349 PTHR24349:SF92
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G41140 : CDPK-related kinase 1
RAP-DB (Rice) LOC_Os07g44710.1 : CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a048941 , Zm00025a052316 , Zm00025a002611 , Zm00025a015299 , Zm00025a006345
Brachypodium PNT74661 , PNT74660 , KQK21574 , KQK14974 , KQK14975 , KQK15185 , KQK14973
Barley HORVU2Hr1G030520.8 , HORVU2Hr1G030520.9 , HORVU2Hr1G030520.1 , HORVU2Hr1G030520.3 , HORVU2Hr1G030520.4 , HORVU2Hr1G030520.5 , HORVU2Hr1G030520.6 , HORVU2Hr1G030520.7 , HORVU5Hr1G097280.1 , HORVU5Hr1G097280.2 , HORVU1Hr1G005350.1 , HORVU1Hr1G005350.2 , HORVU1Hr1G005350.3 , HORVU1Hr1G005350.4 , HORVU2Hr1G030520.10 , HORVU2Hr1G030520.11 , HORVU3Hr1G026700.2 , HORVU3Hr1G026700.1 , HORVU2Hr1G025890.6 , HORVU2Hr1G025890.7 , HORVU2Hr1G025890.4 , HORVU2Hr1G025890.5 , HORVU2Hr1G025890.2 , HORVU2Hr1G025890.3 , HORVU2Hr1G025890.1 , HORVU2Hr1G025890.8 , HORVU2Hr1G025890.9 , HORVU2Hr1G025890.14 , HORVU2Hr1G025890.10 , HORVU2Hr1G025890.11 , HORVU2Hr1G025890.12 , HORVU2Hr1G025890.13 , HORVU6Hr1G064830.1 , HORVU7Hr1G066710.1 , HORVU7Hr1G066710.3 , HORVU7Hr1G066710.2
Wheat TraesCS2D02G150800 , TraesCS2A02G165800 , TraesCS2B02G171600 , TraesCS2A02G146200 , TraesCS2A02G146200 , TraesCS2B02G191800
Populus -


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cDNA sequences
Sobic.002G393200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G148500 expressed protein -
2 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
3 Sobic.005G204700 polygalacturonase, putative, expressed -
4 Sobic.004G152200 glycosyltransferase, putative, expressed -
5 Sobic.002G161700 Myb-like DNA-binding domain containing protein, putative, expressed -
6 Sobic.003G131200 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
7 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
8 Sobic.002G143200 kinesin motor domain containing protein, putative, expressed K10395: kinesin family member 4
9 Sobic.006G267500 katanin p80 WD40 repeat-containing subunit B1 homolog 1, putative, expressed K18643: katanin p80 WD40 repeat-containing subunit B1
10 Sobic.002G034301 - -
11 Sobic.008G192700 ATMAP70 protein, putative, expressed -
12 Sobic.008G015200 NAP1, putative, expressed K05750: NCKAP1, NCK-associated protein 1
13 Sobic.005G159600 lymphoid organ expressed yellow head virus receptor protein, putative, expressed -
14 Sobic.004G225700 F-box/LRR-repeat protein 2, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
15 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
16 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
17 Sobic.010G160400 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed K15227: arogenate dehydrogenase (NADP+), plant
18 Sobic.001G183600 galactosyltransferase, putative, expressed -
19 Sobic.001G385400 guanine nucleotide exchange factor, putative, expressed -
20 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5


Gene co-expression network
sample Sobic002G393200 Sobic002G393200 Sobic008G148500 Sobic008G148500 Sobic002G393200--Sobic008G148500 Sobic006G254500 Sobic006G254500 Sobic002G393200--Sobic006G254500 Sobic005G204700 Sobic005G204700 Sobic002G393200--Sobic005G204700 Sobic004G152200 Sobic004G152200 Sobic002G393200--Sobic004G152200 Sobic002G161700 Sobic002G161700 Sobic002G393200--Sobic002G161700 Sobic003G131200 Sobic003G131200 Sobic002G393200--Sobic003G131200 Sobic009G206500 Sobic009G206500 Sobic002G393200--Sobic009G206500 Sobic002G143200 Sobic002G143200 Sobic002G393200--Sobic002G143200 Sobic006G267500 Sobic006G267500 Sobic002G393200--Sobic006G267500 Sobic008G148500--Sobic002G393200 Sobic006G272500 Sobic006G272500 Sobic008G148500--Sobic006G272500 Sobic001G361800 Sobic001G361800 Sobic008G148500--Sobic001G361800 Sobic001G285200 Sobic001G285200 Sobic008G148500--Sobic001G285200 Sobic008G192700 Sobic008G192700 Sobic008G148500--Sobic008G192700 Sobic009G124800 Sobic009G124800 Sobic008G148500--Sobic009G124800 Sobic002G370400 Sobic002G370400 Sobic008G148500--Sobic002G370400 Sobic010G010900 Sobic010G010900 Sobic008G148500--Sobic010G010900 Sobic009G175100 Sobic009G175100 Sobic008G148500--Sobic009G175100 Sobic006G254500--Sobic006G267500 Sobic009G212100 Sobic009G212100 Sobic006G254500--Sobic009G212100 Sobic004G315700 Sobic004G315700 Sobic006G254500--Sobic004G315700 Sobic006G254500--Sobic002G393200 Sobic007G166800 Sobic007G166800 Sobic006G254500--Sobic007G166800 Sobic006G254500--Sobic001G285200 Sobic003G077500 Sobic003G077500 Sobic006G254500--Sobic003G077500 Sobic001G487200 Sobic001G487200 Sobic006G254500--Sobic001G487200 Sobic006G254500--Sobic009G206500 Sobic005G204700--Sobic006G267500 Sobic005G204700--Sobic002G393200 Sobic005G204700--Sobic009G206500 Sobic004G249100 Sobic004G249100 Sobic005G204700--Sobic004G249100 Sobic001G116000 Sobic001G116000 Sobic005G204700--Sobic001G116000 Sobic010G090500 Sobic010G090500 Sobic005G204700--Sobic010G090500 Sobic004G051300 Sobic004G051300 Sobic005G204700--Sobic004G051300 Sobic010G042600 Sobic010G042600 Sobic005G204700--Sobic010G042600 Sobic003G151300 Sobic003G151300 Sobic005G204700--Sobic003G151300 Sobic001G528600 Sobic001G528600 Sobic004G152200--Sobic001G528600 Sobic001G242800 Sobic001G242800 Sobic004G152200--Sobic001G242800 Sobic004G152200--Sobic002G393200 Sobic002G319200 Sobic002G319200 Sobic004G152200--Sobic002G319200 Sobic007G113300 Sobic007G113300 Sobic004G152200--Sobic007G113300 Sobic002G034301 Sobic002G034301 Sobic004G152200--Sobic002G034301 Sobic004G286700 Sobic004G286700 Sobic004G152200--Sobic004G286700 Sobic004G152200--Sobic009G206500 Sobic004G119700 Sobic004G119700 Sobic004G152200--Sobic004G119700 Sobic002G161700--Sobic002G393200 Sobic002G161700--Sobic009G206500 Sobic004G308100 Sobic004G308100 Sobic002G161700--Sobic004G308100 Sobic002G161700--Sobic007G166800 Sobic009G151700 Sobic009G151700 Sobic002G161700--Sobic009G151700 Sobic009G061000 Sobic009G061000 Sobic002G161700--Sobic009G061000 Sobic003G013000 Sobic003G013000 Sobic002G161700--Sobic003G013000 Sobic002G161700--Sobic002G319200 Sobic002G161700--Sobic006G254500 Sobic010G099800 Sobic010G099800 Sobic003G131200--Sobic010G099800 Sobic003G131200--Sobic002G393200 Sobic002G218700 Sobic002G218700 Sobic003G131200--Sobic002G218700 Sobic006G173200 Sobic006G173200 Sobic003G131200--Sobic006G173200 Sobic009G055400 Sobic009G055400 Sobic003G131200--Sobic009G055400 Sobic001G170100 Sobic001G170100 Sobic003G131200--Sobic001G170100 Sobic009G126000 Sobic009G126000 Sobic003G131200--Sobic009G126000 Sobic004G232000 Sobic004G232000 Sobic003G131200--Sobic004G232000 Sobic010G147833 Sobic010G147833 Sobic003G131200--Sobic010G147833 Sobic007G139500 Sobic007G139500 Sobic009G206500--Sobic007G139500 Sobic010G067800 Sobic010G067800 Sobic009G206500--Sobic010G067800 Sobic009G206500--Sobic006G267500 Sobic001G437500 Sobic001G437500 Sobic009G206500--Sobic001G437500 Sobic001G144200 Sobic001G144200 Sobic009G206500--Sobic001G144200 Sobic007G040301 Sobic007G040301 Sobic009G206500--Sobic007G040301 Sobic002G275500 Sobic002G275500 Sobic009G206500--Sobic002G275500 Sobic009G026101 Sobic009G026101 Sobic009G206500--Sobic009G026101 Sobic001G183600 Sobic001G183600 Sobic009G206500--Sobic001G183600 Sobic001G385400 Sobic001G385400 Sobic002G143200--Sobic001G385400 Sobic006G140600 Sobic006G140600 Sobic002G143200--Sobic006G140600 Sobic008G088842 Sobic008G088842 Sobic002G143200--Sobic008G088842 Sobic002G098500 Sobic002G098500 Sobic002G143200--Sobic002G098500 Sobic008G015200 Sobic008G015200 Sobic002G143200--Sobic008G015200 Sobic003G435500 Sobic003G435500 Sobic002G143200--Sobic003G435500 Sobic001G367100 Sobic001G367100 Sobic002G143200--Sobic001G367100 Sobic004G341700 Sobic004G341700 Sobic002G143200--Sobic004G341700 Sobic002G143200--Sobic008G192700 Sobic006G267500--Sobic009G061000 Sobic006G267500--Sobic009G206500 Sobic006G267500--Sobic009G212100 Sobic006G267500--Sobic006G254500 Sobic006G267500--Sobic001G437500 Sobic006G267500--Sobic004G315700 Sobic006G267500--Sobic010G090500 Sobic006G267500--Sobic005G204700 Sobic001G296800 Sobic001G296800 Sobic006G267500--Sobic001G296800
Octagon: transcription factors


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